EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000003157 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 67556 bases
Position: chrscaffold_2456:30304-97859
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000002918	ResIII	PF04851.15	2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000003157	-	2718	-	ENSVPAP00000002918	905 (aa)	-	UPI00018BCE6B

Gene Model

Click here to download ENSVPAG00000003157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000003157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000003157	-	54	31.376	ENSVPAG00000004701	ERCC6L2	83	31.376

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000003157	-	99	84.802	ENSG00000197275	RAD54B	99	84.802	Homo_sapiens
ENSVPAG00000003157	-	80	89.088	ENSG00000265817	FSBP	99	89.088	Homo_sapiens
ENSVPAG00000003157	-	100	86.828	ENSAMEG00000005834	-	100	86.828	Ailuropoda_melanoleuca
ENSVPAG00000003157	-	99	54.367	ENSACIG00000013005	rad54b	99	54.367	Amphilophus_citrinellus
ENSVPAG00000003157	-	99	53.632	ENSAOCG00000008523	rad54b	99	53.632	Amphiprion_ocellaris
ENSVPAG00000003157	-	99	54.258	ENSAPEG00000001673	rad54b	99	54.367	Amphiprion_percula
ENSVPAG00000003157	-	87	59.874	ENSATEG00000001527	rad54b	99	53.241	Anabas_testudineus
ENSVPAG00000003157	-	99	68.444	ENSAPLG00000014366	-	99	68.444	Anas_platyrhynchos
ENSVPAG00000003157	-	88	70.964	ENSACAG00000003671	-	99	70.964	Anolis_carolinensis
ENSVPAG00000003157	-	71	86.553	ENSANAG00000019528	-	99	86.553	Aotus_nancymaae
ENSVPAG00000003157	-	87	59.899	ENSACLG00000007826	rad54b	92	59.899	Astatotilapia_calliptera
ENSVPAG00000003157	-	86	58.987	ENSAMXG00000039985	rad54b	95	58.573	Astyanax_mexicanus
ENSVPAG00000003157	-	100	87.239	ENSBTAG00000000632	RAD54B	100	87.239	Bos_taurus
ENSVPAG00000003157	-	79	35.255	WBGene00013792	Y116A8C.13	83	35.523	Caenorhabditis_elegans
ENSVPAG00000003157	-	99	83.590	ENSCJAG00000000080	-	99	87.552	Callithrix_jacchus
ENSVPAG00000003157	-	100	84.193	ENSCAFG00000009179	RAD54B	99	84.193	Canis_familiaris
ENSVPAG00000003157	-	100	83.974	ENSCAFG00020012084	-	99	83.974	Canis_lupus_dingo
ENSVPAG00000003157	-	100	87.349	ENSCHIG00000008230	-	100	87.349	Capra_hircus
ENSVPAG00000003157	-	100	83.956	ENSTSYG00000013234	-	100	83.956	Carlito_syrichta
ENSVPAG00000003157	-	100	80.702	ENSCPOG00000011643	-	99	80.702	Cavia_porcellus
ENSVPAG00000003157	-	99	83.572	ENSCCAG00000011754	-	99	87.414	Cebus_capucinus
ENSVPAG00000003157	-	99	84.344	ENSCATG00000030661	-	99	88.658	Cercocebus_atys
ENSVPAG00000003157	-	99	82.178	ENSCLAG00000010476	-	99	82.178	Chinchilla_lanigera
ENSVPAG00000003157	-	99	84.234	ENSCSAG00000012712	-	99	84.234	Chlorocebus_sabaeus
ENSVPAG00000003157	-	99	69.239	ENSCPBG00000003204	-	99	69.509	Chrysemys_picta_bellii
ENSVPAG00000003157	-	99	84.785	ENSCANG00000017939	-	99	88.935	Colobus_angolensis_palliatus
ENSVPAG00000003157	-	100	78.022	ENSCGRG00001020184	Rad54b	100	78.022	Cricetulus_griseus_chok1gshd
ENSVPAG00000003157	-	100	76.703	ENSCGRG00000016752	Rad54b	100	76.703	Cricetulus_griseus_crigri
ENSVPAG00000003157	-	87	59.194	ENSCSEG00000001601	rad54b	93	59.194	Cynoglossus_semilaevis
ENSVPAG00000003157	-	99	56.612	ENSCVAG00000009200	rad54b	99	56.612	Cyprinodon_variegatus
ENSVPAG00000003157	-	100	53.961	ENSDARG00000092134	rad54b	100	59.969	Danio_rerio
ENSVPAG00000003157	-	99	81.928	ENSDNOG00000015535	-	99	81.928	Dasypus_novemcinctus
ENSVPAG00000003157	-	100	81.429	ENSDORG00000002492	Rad54b	100	81.429	Dipodomys_ordii
ENSVPAG00000003157	-	87	79.949	ENSETEG00000010605	-	100	79.949	Echinops_telfairi
ENSVPAG00000003157	-	99	46.254	ENSEBUG00000009104	rad54b	98	46.071	Eptatretus_burgeri
ENSVPAG00000003157	-	95	87.514	ENSEASG00005004021	-	98	87.514	Equus_asinus_asinus
ENSVPAG00000003157	-	100	86.169	ENSECAG00000021949	-	99	86.169	Equus_caballus
ENSVPAG00000003157	-	83	85.535	ENSEEUG00000008056	-	83	85.535	Erinaceus_europaeus
ENSVPAG00000003157	-	86	59.470	ENSELUG00000009287	rad54b	99	53.625	Esox_lucius
ENSVPAG00000003157	-	100	85.950	ENSFCAG00000015513	-	100	89.945	Felis_catus
ENSVPAG00000003157	-	99	67.029	ENSFALG00000005467	-	99	67.029	Ficedula_albicollis
ENSVPAG00000003157	-	99	81.888	ENSFDAG00000020541	-	100	81.888	Fukomys_damarensis
ENSVPAG00000003157	-	89	57.875	ENSFHEG00000014382	rad54b	89	57.998	Fundulus_heteroclitus
ENSVPAG00000003157	-	86	56.964	ENSGMOG00000014774	rad54b	98	56.964	Gadus_morhua
ENSVPAG00000003157	-	99	66.995	ENSGALG00000043597	RAD54B	99	66.995	Gallus_gallus
ENSVPAG00000003157	-	99	54.575	ENSGAFG00000007901	rad54b	99	54.575	Gambusia_affinis
ENSVPAG00000003157	-	99	54.762	ENSGACG00000009128	rad54b	99	54.762	Gasterosteus_aculeatus
ENSVPAG00000003157	-	99	68.192	ENSGAGG00000018747	-	99	68.192	Gopherus_agassizii
ENSVPAG00000003157	-	100	84.396	ENSGGOG00000023516	-	100	84.396	Gorilla_gorilla
ENSVPAG00000003157	-	99	54.652	ENSHBUG00000016017	rad54b	99	54.652	Haplochromis_burtoni
ENSVPAG00000003157	-	100	80.413	ENSHGLG00000008263	RAD54B	99	80.413	Heterocephalus_glaber_female
ENSVPAG00000003157	-	100	79.676	ENSHGLG00100008108	-	99	79.676	Heterocephalus_glaber_male
ENSVPAG00000003157	-	99	53.821	ENSHCOG00000004764	rad54b	98	56.242	Hippocampus_comes
ENSVPAG00000003157	-	100	52.643	ENSIPUG00000018531	rad54b	99	52.643	Ictalurus_punctatus
ENSVPAG00000003157	-	99	81.236	ENSSTOG00000010791	-	99	81.236	Ictidomys_tridecemlineatus
ENSVPAG00000003157	-	100	80.022	ENSJJAG00000010314	Rad54b	100	80.022	Jaculus_jaculus
ENSVPAG00000003157	-	99	53.661	ENSKMAG00000004744	rad54b	99	53.661	Kryptolebias_marmoratus
ENSVPAG00000003157	-	81	70.769	ENSLACG00000000859	-	100	69.437	Latimeria_chalumnae
ENSVPAG00000003157	-	99	58.369	ENSLOCG00000010100	rad54b	96	63.325	Lepisosteus_oculatus
ENSVPAG00000003157	-	89	84.901	ENSLAFG00000015315	-	100	84.901	Loxodonta_africana
ENSVPAG00000003157	-	99	84.344	ENSMFAG00000031629	-	99	88.520	Macaca_fascicularis
ENSVPAG00000003157	-	99	84.344	ENSMMUG00000005659	-	99	84.344	Macaca_mulatta
ENSVPAG00000003157	-	99	84.158	ENSMNEG00000016408	-	99	84.158	Macaca_nemestrina
ENSVPAG00000003157	-	99	84.454	ENSMLEG00000006946	-	99	84.454	Mandrillus_leucophaeus
ENSVPAG00000003157	-	87	60.025	ENSMAMG00000012269	rad54b	89	60.025	Mastacembelus_armatus
ENSVPAG00000003157	-	99	54.652	ENSMZEG00005005281	rad54b	95	60.025	Maylandia_zebra
ENSVPAG00000003157	-	99	66.812	ENSMGAG00000012024	-	99	66.812	Meleagris_gallopavo
ENSVPAG00000003157	-	100	76.923	ENSMAUG00000013586	Rad54b	100	76.923	Mesocricetus_auratus
ENSVPAG00000003157	-	99	82.029	ENSMICG00000000754	-	99	82.029	Microcebus_murinus
ENSVPAG00000003157	-	100	75.192	ENSMOCG00000020035	Rad54b	99	75.192	Microtus_ochrogaster
ENSVPAG00000003157	-	99	54.089	ENSMMOG00000003394	rad54b	99	54.089	Mola_mola
ENSVPAG00000003157	-	89	76.933	ENSMODG00000007343	-	99	77.222	Monodelphis_domestica
ENSVPAG00000003157	-	71	60.187	ENSMALG00000001520	rad54b	99	60.187	Monopterus_albus
ENSVPAG00000003157	-	100	77.143	MGP_CAROLIEiJ_G0025810	Rad54b	100	77.143	Mus_caroli
ENSVPAG00000003157	-	100	76.678	ENSMUSG00000078773	Rad54b	100	76.678	Mus_musculus
ENSVPAG00000003157	-	100	77.228	MGP_PahariEiJ_G0023933	Rad54b	100	77.228	Mus_pahari
ENSVPAG00000003157	-	100	77.118	MGP_SPRETEiJ_G0026758	Rad54b	100	77.118	Mus_spretus
ENSVPAG00000003157	-	89	88.519	ENSMPUG00000008878	-	100	88.519	Mustela_putorius_furo
ENSVPAG00000003157	-	99	82.766	ENSMLUG00000008953	-	99	82.766	Myotis_lucifugus
ENSVPAG00000003157	-	100	80.984	ENSNGAG00000017537	Rad54b	100	80.984	Nannospalax_galili
ENSVPAG00000003157	-	87	60.025	ENSNBRG00000013394	rad54b	92	60.025	Neolamprologus_brichardi
ENSVPAG00000003157	-	99	84.581	ENSNLEG00000003062	-	99	88.674	Nomascus_leucogenys
ENSVPAG00000003157	-	71	74.623	ENSMEUG00000012426	-	71	74.623	Notamacropus_eugenii
ENSVPAG00000003157	-	100	80.132	ENSODEG00000019564	-	100	80.132	Octodon_degus
ENSVPAG00000003157	-	89	77.543	ENSODEG00000002650	-	96	85.208	Octodon_degus
ENSVPAG00000003157	-	99	55.027	ENSONIG00000006067	rad54b	99	55.027	Oreochromis_niloticus
ENSVPAG00000003157	-	83	76.760	ENSOANG00000011348	-	100	76.760	Ornithorhynchus_anatinus
ENSVPAG00000003157	-	100	82.366	ENSOCUG00000016478	-	99	82.366	Oryctolagus_cuniculus
ENSVPAG00000003157	-	99	55.579	ENSORLG00000008918	rad54b	99	62.906	Oryzias_latipes
ENSVPAG00000003157	-	71	62.906	ENSORLG00020012171	rad54b	99	62.906	Oryzias_latipes_hni
ENSVPAG00000003157	-	87	61.461	ENSORLG00015018536	rad54b	84	61.461	Oryzias_latipes_hsok
ENSVPAG00000003157	-	85	60.078	ENSOMEG00000004345	rad54b	99	60.078	Oryzias_melastigma
ENSVPAG00000003157	-	99	82.527	ENSOGAG00000007854	-	99	82.527	Otolemur_garnettii
ENSVPAG00000003157	-	89	90.506	ENSOARG00000007691	-	100	90.506	Ovis_aries
ENSVPAG00000003157	-	99	83.040	ENSPPAG00000029572	-	99	83.040	Pan_paniscus
ENSVPAG00000003157	-	100	86.169	ENSPPRG00000007571	-	100	90.220	Panthera_pardus
ENSVPAG00000003157	-	80	90.083	ENSPTIG00000012670	-	100	90.083	Panthera_tigris_altaica
ENSVPAG00000003157	-	99	84.581	ENSPTRG00000020427	-	99	88.950	Pan_troglodytes
ENSVPAG00000003157	-	99	84.454	ENSPANG00000019566	-	99	84.454	Papio_anubis
ENSVPAG00000003157	-	99	57.895	ENSPKIG00000014974	rad54b	99	57.895	Paramormyrops_kingsleyae
ENSVPAG00000003157	-	99	67.101	ENSPSIG00000002383	-	98	72.727	Pelodiscus_sinensis
ENSVPAG00000003157	-	100	77.143	ENSPEMG00000012133	Rad54b	100	77.143	Peromyscus_maniculatus_bairdii
ENSVPAG00000003157	-	87	58.085	ENSPMAG00000002916	rad54b	99	58.209	Petromyzon_marinus
ENSVPAG00000003157	-	89	77.667	ENSPCIG00000020151	-	94	77.625	Phascolarctos_cinereus
ENSVPAG00000003157	-	99	55.111	ENSPFOG00000023411	rad54b	99	55.111	Poecilia_formosa
ENSVPAG00000003157	-	99	55.285	ENSPLAG00000010430	rad54b	99	55.285	Poecilia_latipinna
ENSVPAG00000003157	-	99	55.158	ENSPMEG00000016873	rad54b	94	60.853	Poecilia_mexicana
ENSVPAG00000003157	-	99	54.593	ENSPREG00000018443	rad54b	99	54.593	Poecilia_reticulata
ENSVPAG00000003157	-	99	84.471	ENSPPYG00000018750	-	99	84.471	Pongo_abelii
ENSVPAG00000003157	-	99	84.505	ENSPCOG00000026845	-	99	87.862	Propithecus_coquereli
ENSVPAG00000003157	-	88	89.204	ENSPVAG00000000261	-	92	89.204	Pteropus_vampyrus
ENSVPAG00000003157	-	87	59.446	ENSPNYG00000018303	rad54b	96	59.446	Pundamilia_nyererei
ENSVPAG00000003157	-	99	54.113	ENSPNAG00000000295	rad54b	99	54.113	Pygocentrus_nattereri
ENSVPAG00000003157	-	100	74.037	ENSRNOG00000039949	Rad54b	100	74.037	Rattus_norvegicus
ENSVPAG00000003157	-	99	83.903	ENSRBIG00000020419	-	99	83.903	Rhinopithecus_bieti
ENSVPAG00000003157	-	99	83.903	ENSRROG00000039897	-	99	83.903	Rhinopithecus_roxellana
ENSVPAG00000003157	-	82	36.496	YBR073W	RDH54	61	42.175	Saccharomyces_cerevisiae
ENSVPAG00000003157	-	99	83.168	ENSSBOG00000028501	-	99	83.168	Saimiri_boliviensis_boliviensis
ENSVPAG00000003157	-	99	72.289	ENSSHAG00000017038	-	99	72.289	Sarcophilus_harrisii
ENSVPAG00000003157	-	65	65.417	ENSSFOG00015008483	rad54b	91	65.417	Scleropages_formosus
ENSVPAG00000003157	-	87	59.598	ENSSMAG00000018659	rad54b	99	54.684	Scophthalmus_maximus
ENSVPAG00000003157	-	86	59.949	ENSSDUG00000001122	rad54b	98	54.083	Seriola_dumerili
ENSVPAG00000003157	-	99	51.196	ENSSLDG00000013787	rad54b	99	51.196	Seriola_lalandi_dorsalis
ENSVPAG00000003157	-	99	66.630	ENSSPUG00000016497	-	99	66.630	Sphenodon_punctatus
ENSVPAG00000003157	-	99	54.744	ENSSPAG00000012800	rad54b	99	54.744	Stegastes_partitus
ENSVPAG00000003157	-	99	88.009	ENSSSCG00000006101	-	99	91.217	Sus_scrofa
ENSVPAG00000003157	-	99	66.594	ENSTGUG00000011880	-	99	66.594	Taeniopygia_guttata
ENSVPAG00000003157	-	86	60.229	ENSTRUG00000010015	rad54b	99	54.207	Takifugu_rubripes
ENSVPAG00000003157	-	100	84.708	ENSTTRG00000006312	-	100	84.708	Tursiops_truncatus
ENSVPAG00000003157	-	100	86.718	ENSUMAG00000016401	-	100	86.718	Ursus_maritimus
ENSVPAG00000003157	-	99	55.556	ENSXETG00000025924	rad54b	99	60.401	Xenopus_tropicalis
ENSVPAG00000003157	-	99	54.863	ENSXMAG00000013141	rad54b	99	54.863	Xiphophorus_maculatus