EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000003478 (Gene tree)
Gene ID: -
Gene Symbol: PPARGC1A
Alias: PGC-1alpha|PGC1|PGC1A|PPARGC1
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 115358 bases
Position: chrGeneScaffold_2925:1082776-1198133
Accession: 9237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000003222	RRM_1	PF00076.22	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000003478	PPARGC1A-201	2391	-	ENSVPAP00000003222	796 (aa)	-	UPI00018BE988

Gene Model

Click here to download ENSVPAG00000003478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000003478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000003478	PPARGC1A	90	94.444	ENSG00000109819	PPARGC1A	100	94.188	Homo_sapiens
ENSVPAG00000003478	PPARGC1A	90	94.444	ENSAMEG00000010421	PPARGC1A	90	94.444	Ailuropoda_melanoleuca
ENSVPAG00000003478	PPARGC1A	72	72.897	ENSATEG00000016702	ppargc1a	84	81.818	Anabas_testudineus
ENSVPAG00000003478	PPARGC1A	100	80.653	ENSAPLG00000005303	PPARGC1A	90	87.222	Anas_platyrhynchos
ENSVPAG00000003478	PPARGC1A	100	75.063	ENSACAG00000000741	PPARGC1A	100	75.063	Anolis_carolinensis
ENSVPAG00000003478	PPARGC1A	90	94.028	ENSANAG00000035930	PPARGC1A	97	89.465	Aotus_nancymaae
ENSVPAG00000003478	PPARGC1A	96	50.862	ENSAMXG00000002461	ppargc1a	83	80.000	Astyanax_mexicanus
ENSVPAG00000003478	PPARGC1A	100	86.575	ENSBTAG00000017024	PPARGC1A	92	94.313	Bos_taurus
ENSVPAG00000003478	PPARGC1A	90	93.750	ENSCJAG00000013024	PPARGC1A	91	93.750	Callithrix_jacchus
ENSVPAG00000003478	PPARGC1A	90	95.000	ENSCAFG00000016519	PPARGC1A	90	95.000	Canis_familiaris
ENSVPAG00000003478	PPARGC1A	90	95.000	ENSCAFG00020027242	PPARGC1A	93	95.000	Canis_lupus_dingo
ENSVPAG00000003478	PPARGC1A	90	94.452	ENSCHIG00000015991	PPARGC1A	92	94.452	Capra_hircus
ENSVPAG00000003478	PPARGC1A	90	95.000	ENSTSYG00000010439	PPARGC1A	100	94.784	Carlito_syrichta
ENSVPAG00000003478	PPARGC1A	90	88.889	ENSCAPG00000005150	PPARGC1A	90	88.889	Cavia_aperea
ENSVPAG00000003478	PPARGC1A	90	92.639	ENSCPOG00000001518	PPARGC1A	90	92.639	Cavia_porcellus
ENSVPAG00000003478	PPARGC1A	90	94.028	ENSCCAG00000024681	PPARGC1A	90	94.028	Cebus_capucinus
ENSVPAG00000003478	PPARGC1A	90	94.583	ENSCATG00000032575	PPARGC1A	100	94.337	Cercocebus_atys
ENSVPAG00000003478	PPARGC1A	90	92.778	ENSCLAG00000002058	PPARGC1A	91	92.778	Chinchilla_lanigera
ENSVPAG00000003478	PPARGC1A	90	94.583	ENSCSAG00000016575	PPARGC1A	90	94.583	Chlorocebus_sabaeus
ENSVPAG00000003478	PPARGC1A	90	94.167	ENSCANG00000033426	PPARGC1A	90	94.167	Colobus_angolensis_palliatus
ENSVPAG00000003478	PPARGC1A	100	84.673	ENSCGRG00001015534	Ppargc1a	90	91.528	Cricetulus_griseus_chok1gshd
ENSVPAG00000003478	PPARGC1A	100	84.673	ENSCGRG00000000200	Ppargc1a	90	91.528	Cricetulus_griseus_crigri
ENSVPAG00000003478	PPARGC1A	81	81.818	ENSCSEG00000006884	ppargc1a	71	81.818	Cynoglossus_semilaevis
ENSVPAG00000003478	PPARGC1A	70	45.373	ENSCVAG00000016547	ppargc1a	65	78.182	Cyprinodon_variegatus
ENSVPAG00000003478	PPARGC1A	76	79.213	ENSDARG00000067829	ppargc1a	83	81.212	Danio_rerio
ENSVPAG00000003478	PPARGC1A	90	94.306	ENSDNOG00000041106	PPARGC1A	90	94.306	Dasypus_novemcinctus
ENSVPAG00000003478	PPARGC1A	90	92.917	ENSDORG00000016276	Ppargc1a	90	92.917	Dipodomys_ordii
ENSVPAG00000003478	PPARGC1A	90	95.694	ENSEASG00005007984	PPARGC1A	90	95.694	Equus_asinus_asinus
ENSVPAG00000003478	PPARGC1A	90	95.833	ENSECAG00000009164	PPARGC1A	95	95.833	Equus_caballus
ENSVPAG00000003478	PPARGC1A	90	89.182	ENSEEUG00000009219	PPARGC1A	92	87.656	Erinaceus_europaeus
ENSVPAG00000003478	PPARGC1A	65	83.146	ENSELUG00000017027	ppargc1a	86	83.030	Esox_lucius
ENSVPAG00000003478	PPARGC1A	90	94.861	ENSFCAG00000000043	PPARGC1A	90	94.861	Felis_catus
ENSVPAG00000003478	PPARGC1A	90	85.972	ENSFALG00000009211	PPARGC1A	91	85.972	Ficedula_albicollis
ENSVPAG00000003478	PPARGC1A	90	92.361	ENSFDAG00000005659	PPARGC1A	90	92.361	Fukomys_damarensis
ENSVPAG00000003478	PPARGC1A	100	80.653	ENSGALG00000042851	PPARGC1A	91	86.944	Gallus_gallus
ENSVPAG00000003478	PPARGC1A	88	79.545	ENSGAFG00000015514	ppargc1a	58	79.394	Gambusia_affinis
ENSVPAG00000003478	PPARGC1A	90	85.139	ENSGAGG00000007043	PPARGC1A	94	85.139	Gopherus_agassizii
ENSVPAG00000003478	PPARGC1A	90	94.444	ENSGGOG00000009810	PPARGC1A	90	94.444	Gorilla_gorilla
ENSVPAG00000003478	PPARGC1A	51	82.184	ENSHBUG00000005269	ppargc1a	83	81.818	Haplochromis_burtoni
ENSVPAG00000003478	PPARGC1A	90	90.972	ENSHGLG00000007022	PPARGC1A	92	89.444	Heterocephalus_glaber_female
ENSVPAG00000003478	PPARGC1A	90	90.972	ENSHGLG00100000133	PPARGC1A	90	89.444	Heterocephalus_glaber_male
ENSVPAG00000003478	PPARGC1A	52	72.772	ENSHCOG00000014886	ppargc1a	83	79.394	Hippocampus_comes
ENSVPAG00000003478	PPARGC1A	90	93.194	ENSSTOG00000012522	PPARGC1A	90	93.194	Ictidomys_tridecemlineatus
ENSVPAG00000003478	PPARGC1A	82	80.682	ENSKMAG00000005390	ppargc1a	84	80.606	Kryptolebias_marmoratus
ENSVPAG00000003478	PPARGC1A	55	49.138	ENSLBEG00000019562	ppargc1a	100	48.152	Labrus_bergylta
ENSVPAG00000003478	PPARGC1A	90	70.360	ENSLACG00000014054	PPARGC1A	92	72.299	Latimeria_chalumnae
ENSVPAG00000003478	PPARGC1A	55	42.105	ENSLOCG00000012195	ppargc1b	51	42.105	Lepisosteus_oculatus
ENSVPAG00000003478	PPARGC1A	90	93.056	ENSLAFG00000012981	PPARGC1A	98	93.056	Loxodonta_africana
ENSVPAG00000003478	PPARGC1A	90	94.028	ENSMFAG00000000534	PPARGC1A	90	94.028	Macaca_fascicularis
ENSVPAG00000003478	PPARGC1A	90	94.167	ENSMMUG00000001844	PPARGC1A	90	94.167	Macaca_mulatta
ENSVPAG00000003478	PPARGC1A	90	94.167	ENSMNEG00000028682	PPARGC1A	91	94.167	Macaca_nemestrina
ENSVPAG00000003478	PPARGC1A	90	94.583	ENSMLEG00000034233	PPARGC1A	90	94.583	Mandrillus_leucophaeus
ENSVPAG00000003478	PPARGC1A	67	83.333	ENSMAMG00000005531	ppargc1a	84	83.636	Mastacembelus_armatus
ENSVPAG00000003478	PPARGC1A	100	80.528	ENSMGAG00000012485	PPARGC1A	90	86.806	Meleagris_gallopavo
ENSVPAG00000003478	PPARGC1A	100	84.422	ENSMAUG00000011811	Ppargc1a	90	91.250	Mesocricetus_auratus
ENSVPAG00000003478	PPARGC1A	90	94.444	ENSMICG00000015390	PPARGC1A	97	90.674	Microcebus_murinus
ENSVPAG00000003478	PPARGC1A	100	84.296	ENSMOCG00000008765	Ppargc1a	90	91.111	Microtus_ochrogaster
ENSVPAG00000003478	PPARGC1A	81	80.702	ENSMMOG00000011847	ppargc1a	90	83.030	Mola_mola
ENSVPAG00000003478	PPARGC1A	100	82.789	ENSMODG00000000549	PPARGC1A	90	89.306	Monodelphis_domestica
ENSVPAG00000003478	PPARGC1A	67	77.586	ENSMALG00000004625	ppargc1a	73	77.576	Monopterus_albus
ENSVPAG00000003478	PPARGC1A	100	84.045	MGP_CAROLIEiJ_G0027213	Ppargc1a	90	90.833	Mus_caroli
ENSVPAG00000003478	PPARGC1A	100	84.191	ENSMUSG00000029167	Ppargc1a	90	90.985	Mus_musculus
ENSVPAG00000003478	PPARGC1A	100	83.920	MGP_PahariEiJ_G0016995	Ppargc1a	90	90.694	Mus_pahari
ENSVPAG00000003478	PPARGC1A	100	83.940	MGP_SPRETEiJ_G0028208	Ppargc1a	90	90.707	Mus_spretus
ENSVPAG00000003478	PPARGC1A	90	94.583	ENSMPUG00000016736	PPARGC1A	90	94.583	Mustela_putorius_furo
ENSVPAG00000003478	PPARGC1A	90	93.889	ENSMLUG00000016307	PPARGC1A	90	93.889	Myotis_lucifugus
ENSVPAG00000003478	PPARGC1A	90	90.972	ENSNGAG00000015090	Ppargc1a	90	90.972	Nannospalax_galili
ENSVPAG00000003478	PPARGC1A	90	92.818	ENSNLEG00000016760	PPARGC1A	100	94.188	Nomascus_leucogenys
ENSVPAG00000003478	PPARGC1A	90	90.972	ENSOPRG00000012899	PPARGC1A	90	90.972	Ochotona_princeps
ENSVPAG00000003478	PPARGC1A	100	81.533	ENSOANG00000006680	PPARGC1A	90	87.917	Ornithorhynchus_anatinus
ENSVPAG00000003478	PPARGC1A	90	91.806	ENSOCUG00000014668	PPARGC1A	90	91.806	Oryctolagus_cuniculus
ENSVPAG00000003478	PPARGC1A	81	80.337	ENSORLG00000004788	ppargc1a	59	80.606	Oryzias_latipes
ENSVPAG00000003478	PPARGC1A	81	79.213	ENSORLG00020014690	ppargc1a	59	79.394	Oryzias_latipes_hni
ENSVPAG00000003478	PPARGC1A	81	79.775	ENSORLG00015012206	ppargc1a	82	80.000	Oryzias_latipes_hsok
ENSVPAG00000003478	PPARGC1A	69	80.606	ENSOMEG00000000670	ppargc1a	86	80.606	Oryzias_melastigma
ENSVPAG00000003478	PPARGC1A	90	92.639	ENSOGAG00000014559	PPARGC1A	90	92.639	Otolemur_garnettii
ENSVPAG00000003478	PPARGC1A	90	94.591	ENSOARG00000005581	PPARGC1A	88	94.591	Ovis_aries
ENSVPAG00000003478	PPARGC1A	90	94.306	ENSPPAG00000034694	PPARGC1A	100	94.188	Pan_paniscus
ENSVPAG00000003478	PPARGC1A	90	94.583	ENSPPRG00000001711	PPARGC1A	90	94.583	Panthera_pardus
ENSVPAG00000003478	PPARGC1A	90	94.583	ENSPTIG00000007378	PPARGC1A	90	94.583	Panthera_tigris_altaica
ENSVPAG00000003478	PPARGC1A	90	94.444	ENSPTRG00000015954	PPARGC1A	100	94.188	Pan_troglodytes
ENSVPAG00000003478	PPARGC1A	90	93.343	ENSPANG00000005420	PPARGC1A	90	93.343	Papio_anubis
ENSVPAG00000003478	PPARGC1A	78	70.391	ENSPKIG00000002531	ppargc1a	64	55.128	Paramormyrops_kingsleyae
ENSVPAG00000003478	PPARGC1A	100	80.276	ENSPSIG00000011790	PPARGC1A	100	80.276	Pelodiscus_sinensis
ENSVPAG00000003478	PPARGC1A	80	78.182	ENSPMGG00000019204	ppargc1a	91	47.188	Periophthalmus_magnuspinnatus
ENSVPAG00000003478	PPARGC1A	100	84.442	ENSPEMG00000010892	Ppargc1a	90	91.262	Peromyscus_maniculatus_bairdii
ENSVPAG00000003478	PPARGC1A	100	82.286	ENSPCIG00000015835	PPARGC1A	90	88.750	Phascolarctos_cinereus
ENSVPAG00000003478	PPARGC1A	67	38.275	ENSPFOG00000001263	ppargc1a	66	42.741	Poecilia_formosa
ENSVPAG00000003478	PPARGC1A	88	79.545	ENSPMEG00000000720	ppargc1a	92	47.851	Poecilia_mexicana
ENSVPAG00000003478	PPARGC1A	88	79.545	ENSPREG00000019171	ppargc1a	66	79.394	Poecilia_reticulata
ENSVPAG00000003478	PPARGC1A	90	94.583	ENSPPYG00000014640	PPARGC1A	90	94.583	Pongo_abelii
ENSVPAG00000003478	PPARGC1A	90	90.278	ENSPCAG00000016308	PPARGC1A	90	90.278	Procavia_capensis
ENSVPAG00000003478	PPARGC1A	90	94.583	ENSPCOG00000022858	PPARGC1A	97	90.328	Propithecus_coquereli
ENSVPAG00000003478	PPARGC1A	90	94.583	ENSPVAG00000004965	PPARGC1A	90	94.583	Pteropus_vampyrus
ENSVPAG00000003478	PPARGC1A	96	51.701	ENSPNAG00000010393	ppargc1a	91	48.846	Pygocentrus_nattereri
ENSVPAG00000003478	PPARGC1A	100	84.296	ENSRNOG00000004473	Ppargc1a	90	91.111	Rattus_norvegicus
ENSVPAG00000003478	PPARGC1A	90	94.028	ENSRBIG00000032333	PPARGC1A	90	94.028	Rhinopithecus_bieti
ENSVPAG00000003478	PPARGC1A	90	94.167	ENSRROG00000010419	PPARGC1A	91	94.167	Rhinopithecus_roxellana
ENSVPAG00000003478	PPARGC1A	90	94.167	ENSSBOG00000006423	PPARGC1A	91	94.167	Saimiri_boliviensis_boliviensis
ENSVPAG00000003478	PPARGC1A	100	83.166	ENSSHAG00000010033	PPARGC1A	95	89.722	Sarcophilus_harrisii
ENSVPAG00000003478	PPARGC1A	53	65.657	ENSSFOG00015001633	ppargc1a	76	59.864	Scleropages_formosus
ENSVPAG00000003478	PPARGC1A	100	48.485	ENSSMAG00000011571	ppargc1a	70	82.424	Scophthalmus_maximus
ENSVPAG00000003478	PPARGC1A	68	43.590	ENSSDUG00000007408	ppargc1a	73	43.761	Seriola_dumerili
ENSVPAG00000003478	PPARGC1A	100	46.436	ENSSLDG00000006987	ppargc1a	85	83.030	Seriola_lalandi_dorsalis
ENSVPAG00000003478	PPARGC1A	100	79.774	ENSSARG00000000575	PPARGC1A	90	86.250	Sorex_araneus
ENSVPAG00000003478	PPARGC1A	100	79.648	ENSSPUG00000013556	PPARGC1A	100	79.648	Sphenodon_punctatus
ENSVPAG00000003478	PPARGC1A	60	82.955	ENSSPAG00000023514	ppargc1a	59	83.030	Stegastes_partitus
ENSVPAG00000003478	PPARGC1A	90	95.278	ENSSSCG00000029275	PPARGC1A	92	95.278	Sus_scrofa
ENSVPAG00000003478	PPARGC1A	100	79.146	ENSTGUG00000009487	PPARGC1A	90	85.417	Taeniopygia_guttata
ENSVPAG00000003478	PPARGC1A	90	93.889	ENSTTRG00000005327	PPARGC1A	90	93.889	Tursiops_truncatus
ENSVPAG00000003478	PPARGC1A	90	93.880	ENSUAMG00000020843	PPARGC1A	100	93.592	Ursus_americanus
ENSVPAG00000003478	PPARGC1A	90	94.444	ENSUMAG00000003557	PPARGC1A	92	94.444	Ursus_maritimus
ENSVPAG00000003478	PPARGC1A	90	94.861	ENSVVUG00000013365	PPARGC1A	90	94.861	Vulpes_vulpes
ENSVPAG00000003478	PPARGC1A	100	67.714	ENSXETG00000020468	ppargc1a	100	68.593	Xenopus_tropicalis
ENSVPAG00000003478	PPARGC1A	100	45.714	ENSXCOG00000004835	ppargc1a	87	78.788	Xiphophorus_couchianus
ENSVPAG00000003478	PPARGC1A	88	78.977	ENSXMAG00000007748	ppargc1a	58	79.394	Xiphophorus_maculatus