EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000003503 (Gene tree)
Gene ID: -
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 19730 bases
Position: chrGeneScaffold_1429:487787-507516
Accession: 2325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000003245	Beta-Casp	PF10996.8	3.7e-21	1	1
ENSVPAP00000003245	Lactamase_B	PF00753.27	6.2e-07	1	1
ENSVPAP00000003245	RMMBL	PF07521.12	4.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000003502	CPSF2-201	2343	-	ENSVPAP00000003245	781 (aa)	-	UPI00018BDCAF

Gene Model

Click here to download ENSVPAG00000003503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000003503's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000003503	CPSF2	100	99.616	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSVPAG00000003503	CPSF2	100	85.787	ENSAPOG00000001242	cpsf2	99	85.787	Acanthochromis_polyacanthus
ENSVPAG00000003503	CPSF2	100	86.185	ENSACIG00000009331	cpsf2	99	86.185	Amphilophus_citrinellus
ENSVPAG00000003503	CPSF2	100	85.914	ENSAOCG00000014095	cpsf2	99	85.914	Amphiprion_ocellaris
ENSVPAG00000003503	CPSF2	100	85.914	ENSAPEG00000009158	cpsf2	99	85.914	Amphiprion_percula
ENSVPAG00000003503	CPSF2	96	86.184	ENSATEG00000017644	cpsf2	99	84.281	Anabas_testudineus
ENSVPAG00000003503	CPSF2	100	96.046	ENSAPLG00000006330	CPSF2	99	96.046	Anas_platyrhynchos
ENSVPAG00000003503	CPSF2	100	95.013	ENSACAG00000009245	CPSF2	99	95.013	Anolis_carolinensis
ENSVPAG00000003503	CPSF2	100	99.616	ENSANAG00000022915	CPSF2	99	99.616	Aotus_nancymaae
ENSVPAG00000003503	CPSF2	100	85.623	ENSAMXG00000018696	cpsf2	99	85.623	Astyanax_mexicanus
ENSVPAG00000003503	CPSF2	100	99.616	ENSBTAG00000010227	CPSF2	99	99.616	Bos_taurus
ENSVPAG00000003503	CPSF2	100	41.618	WBGene00017313	cpsf-2	99	41.080	Caenorhabditis_elegans
ENSVPAG00000003503	CPSF2	100	99.616	ENSCJAG00000018069	CPSF2	99	99.616	Callithrix_jacchus
ENSVPAG00000003503	CPSF2	100	99.744	ENSCAFG00000010909	CPSF2	99	99.744	Canis_familiaris
ENSVPAG00000003503	CPSF2	100	99.744	ENSCAFG00020020670	CPSF2	99	99.744	Canis_lupus_dingo
ENSVPAG00000003503	CPSF2	100	99.616	ENSCHIG00000023848	CPSF2	99	99.616	Capra_hircus
ENSVPAG00000003503	CPSF2	100	98.464	ENSTSYG00000009036	CPSF2	99	98.464	Carlito_syrichta
ENSVPAG00000003503	CPSF2	100	99.872	ENSCPOG00000010899	CPSF2	99	99.872	Cavia_porcellus
ENSVPAG00000003503	CPSF2	100	99.616	ENSCCAG00000028088	CPSF2	99	99.616	Cebus_capucinus
ENSVPAG00000003503	CPSF2	100	99.744	ENSCATG00000030132	CPSF2	99	99.744	Cercocebus_atys
ENSVPAG00000003503	CPSF2	100	99.744	ENSCLAG00000012404	CPSF2	99	99.744	Chinchilla_lanigera
ENSVPAG00000003503	CPSF2	100	99.744	ENSCSAG00000011300	CPSF2	99	99.744	Chlorocebus_sabaeus
ENSVPAG00000003503	CPSF2	100	92.574	ENSCHOG00000012904	CPSF2	99	92.574	Choloepus_hoffmanni
ENSVPAG00000003503	CPSF2	100	96.419	ENSCPBG00000008766	CPSF2	97	96.419	Chrysemys_picta_bellii
ENSVPAG00000003503	CPSF2	100	54.738	ENSCING00000007881	-	99	54.364	Ciona_intestinalis
ENSVPAG00000003503	CPSF2	94	99.726	ENSCANG00000041651	CPSF2	99	99.726	Colobus_angolensis_palliatus
ENSVPAG00000003503	CPSF2	100	98.592	ENSCGRG00001006901	Cpsf2	99	98.592	Cricetulus_griseus_chok1gshd
ENSVPAG00000003503	CPSF2	100	98.592	ENSCGRG00000012416	Cpsf2	99	98.592	Cricetulus_griseus_crigri
ENSVPAG00000003503	CPSF2	100	83.756	ENSCSEG00000004116	cpsf2	99	83.756	Cynoglossus_semilaevis
ENSVPAG00000003503	CPSF2	100	85.152	ENSCVAG00000000095	cpsf2	99	85.279	Cyprinodon_variegatus
ENSVPAG00000003503	CPSF2	100	85.551	ENSDARG00000028971	cpsf2	99	85.551	Danio_rerio
ENSVPAG00000003503	CPSF2	100	99.616	ENSDNOG00000042757	CPSF2	99	99.616	Dasypus_novemcinctus
ENSVPAG00000003503	CPSF2	100	99.488	ENSDORG00000013709	Cpsf2	99	99.488	Dipodomys_ordii
ENSVPAG00000003503	CPSF2	100	53.865	FBgn0027873	Cpsf100	99	53.625	Drosophila_melanogaster
ENSVPAG00000003503	CPSF2	100	90.537	ENSETEG00000012123	CPSF2	99	90.537	Echinops_telfairi
ENSVPAG00000003503	CPSF2	52	76.225	ENSEBUG00000012098	cpsf2	93	76.225	Eptatretus_burgeri
ENSVPAG00000003503	CPSF2	91	97.270	ENSEASG00005021193	CPSF2	99	97.270	Equus_asinus_asinus
ENSVPAG00000003503	CPSF2	100	99.616	ENSECAG00000023935	CPSF2	99	99.616	Equus_caballus
ENSVPAG00000003503	CPSF2	100	84.045	ENSELUG00000008442	cpsf2	99	84.045	Esox_lucius
ENSVPAG00000003503	CPSF2	100	99.616	ENSFCAG00000007886	CPSF2	99	99.616	Felis_catus
ENSVPAG00000003503	CPSF2	100	96.292	ENSFALG00000002412	CPSF2	99	96.292	Ficedula_albicollis
ENSVPAG00000003503	CPSF2	100	99.744	ENSFDAG00000006327	CPSF2	99	99.744	Fukomys_damarensis
ENSVPAG00000003503	CPSF2	96	84.444	ENSFHEG00000015465	cpsf2	98	84.706	Fundulus_heteroclitus
ENSVPAG00000003503	CPSF2	100	83.439	ENSGMOG00000008761	cpsf2	99	83.439	Gadus_morhua
ENSVPAG00000003503	CPSF2	100	95.524	ENSGALG00000010783	CPSF2	99	96.036	Gallus_gallus
ENSVPAG00000003503	CPSF2	100	85.406	ENSGAFG00000001407	cpsf2	99	85.406	Gambusia_affinis
ENSVPAG00000003503	CPSF2	100	84.518	ENSGACG00000008418	cpsf2	99	84.518	Gasterosteus_aculeatus
ENSVPAG00000003503	CPSF2	100	96.547	ENSGAGG00000008287	CPSF2	99	96.547	Gopherus_agassizii
ENSVPAG00000003503	CPSF2	100	99.616	ENSGGOG00000011799	CPSF2	99	99.616	Gorilla_gorilla
ENSVPAG00000003503	CPSF2	100	85.152	ENSHBUG00000023466	cpsf2	99	85.152	Haplochromis_burtoni
ENSVPAG00000003503	CPSF2	100	99.616	ENSHGLG00000018311	CPSF2	99	99.616	Heterocephalus_glaber_female
ENSVPAG00000003503	CPSF2	100	99.616	ENSHGLG00100016460	CPSF2	99	99.616	Heterocephalus_glaber_male
ENSVPAG00000003503	CPSF2	100	84.518	ENSHCOG00000019527	cpsf2	98	84.518	Hippocampus_comes
ENSVPAG00000003503	CPSF2	100	85.623	ENSIPUG00000020857	cpsf2	99	85.623	Ictalurus_punctatus
ENSVPAG00000003503	CPSF2	100	99.744	ENSSTOG00000009528	CPSF2	99	99.744	Ictidomys_tridecemlineatus
ENSVPAG00000003503	CPSF2	100	99.360	ENSJJAG00000017925	Cpsf2	99	99.360	Jaculus_jaculus
ENSVPAG00000003503	CPSF2	100	84.645	ENSKMAG00000019429	cpsf2	99	84.645	Kryptolebias_marmoratus
ENSVPAG00000003503	CPSF2	95	84.048	ENSLBEG00000011585	cpsf2	99	84.203	Labrus_bergylta
ENSVPAG00000003503	CPSF2	100	89.386	ENSLACG00000019024	CPSF2	99	89.898	Latimeria_chalumnae
ENSVPAG00000003503	CPSF2	100	87.563	ENSLOCG00000014102	cpsf2	99	87.563	Lepisosteus_oculatus
ENSVPAG00000003503	CPSF2	100	99.361	ENSLAFG00000004891	CPSF2	99	99.361	Loxodonta_africana
ENSVPAG00000003503	CPSF2	100	99.744	ENSMFAG00000041212	CPSF2	99	99.744	Macaca_fascicularis
ENSVPAG00000003503	CPSF2	100	99.744	ENSMMUG00000000699	CPSF2	99	99.744	Macaca_mulatta
ENSVPAG00000003503	CPSF2	100	99.744	ENSMNEG00000031584	CPSF2	99	99.744	Macaca_nemestrina
ENSVPAG00000003503	CPSF2	100	99.744	ENSMLEG00000029394	CPSF2	99	99.744	Mandrillus_leucophaeus
ENSVPAG00000003503	CPSF2	100	85.787	ENSMAMG00000004235	cpsf2	99	85.787	Mastacembelus_armatus
ENSVPAG00000003503	CPSF2	100	85.279	ENSMZEG00005001769	cpsf2	99	85.279	Maylandia_zebra
ENSVPAG00000003503	CPSF2	100	95.530	ENSMGAG00000013122	CPSF2	99	96.041	Meleagris_gallopavo
ENSVPAG00000003503	CPSF2	100	98.592	ENSMAUG00000015160	Cpsf2	99	98.592	Mesocricetus_auratus
ENSVPAG00000003503	CPSF2	100	99.616	ENSMICG00000016441	CPSF2	99	99.616	Microcebus_murinus
ENSVPAG00000003503	CPSF2	100	98.592	ENSMOCG00000015372	Cpsf2	99	98.592	Microtus_ochrogaster
ENSVPAG00000003503	CPSF2	100	81.091	ENSMMOG00000015590	cpsf2	99	81.091	Mola_mola
ENSVPAG00000003503	CPSF2	100	98.976	ENSMODG00000002042	CPSF2	99	98.976	Monodelphis_domestica
ENSVPAG00000003503	CPSF2	100	82.614	ENSMALG00000022275	cpsf2	99	82.614	Monopterus_albus
ENSVPAG00000003503	CPSF2	100	98.079	ENSMUSG00000041781	Cpsf2	99	98.079	Mus_musculus
ENSVPAG00000003503	CPSF2	100	98.335	MGP_PahariEiJ_G0029791	Cpsf2	99	98.335	Mus_pahari
ENSVPAG00000003503	CPSF2	100	98.079	MGP_SPRETEiJ_G0018877	Cpsf2	99	98.079	Mus_spretus
ENSVPAG00000003503	CPSF2	100	99.744	ENSMPUG00000007617	CPSF2	98	99.744	Mustela_putorius_furo
ENSVPAG00000003503	CPSF2	100	98.976	ENSMLUG00000005570	CPSF2	99	98.976	Myotis_lucifugus
ENSVPAG00000003503	CPSF2	100	99.104	ENSNGAG00000020312	Cpsf2	99	99.104	Nannospalax_galili
ENSVPAG00000003503	CPSF2	100	85.660	ENSNBRG00000022402	cpsf2	99	85.660	Neolamprologus_brichardi
ENSVPAG00000003503	CPSF2	100	98.720	ENSNLEG00000017132	CPSF2	99	98.720	Nomascus_leucogenys
ENSVPAG00000003503	CPSF2	91	99.353	ENSMEUG00000008138	CPSF2	91	99.353	Notamacropus_eugenii
ENSVPAG00000003503	CPSF2	94	91.655	ENSOPRG00000008484	-	99	91.655	Ochotona_princeps
ENSVPAG00000003503	CPSF2	100	99.488	ENSODEG00000008682	CPSF2	99	99.488	Octodon_degus
ENSVPAG00000003503	CPSF2	100	86.041	ENSONIG00000005901	cpsf2	99	86.041	Oreochromis_niloticus
ENSVPAG00000003503	CPSF2	100	98.592	ENSOANG00000003822	CPSF2	99	98.592	Ornithorhynchus_anatinus
ENSVPAG00000003503	CPSF2	100	99.360	ENSOCUG00000005713	CPSF2	99	99.360	Oryctolagus_cuniculus
ENSVPAG00000003503	CPSF2	100	79.949	ENSORLG00000011628	cpsf2	99	79.949	Oryzias_latipes
ENSVPAG00000003503	CPSF2	100	84.772	ENSORLG00020016980	cpsf2	99	84.772	Oryzias_latipes_hni
ENSVPAG00000003503	CPSF2	100	84.772	ENSORLG00015011910	cpsf2	99	84.772	Oryzias_latipes_hsok
ENSVPAG00000003503	CPSF2	100	84.010	ENSOMEG00000022876	cpsf2	99	84.010	Oryzias_melastigma
ENSVPAG00000003503	CPSF2	100	96.552	ENSOARG00000012889	CPSF2	99	96.552	Ovis_aries
ENSVPAG00000003503	CPSF2	100	99.616	ENSPPAG00000039666	CPSF2	99	99.616	Pan_paniscus
ENSVPAG00000003503	CPSF2	99	99.615	ENSPPRG00000010869	CPSF2	99	99.615	Panthera_pardus
ENSVPAG00000003503	CPSF2	100	99.616	ENSPTIG00000021202	CPSF2	99	99.616	Panthera_tigris_altaica
ENSVPAG00000003503	CPSF2	100	99.616	ENSPTRG00000006651	CPSF2	99	99.616	Pan_troglodytes
ENSVPAG00000003503	CPSF2	100	99.744	ENSPANG00000017417	CPSF2	99	99.744	Papio_anubis
ENSVPAG00000003503	CPSF2	100	82.061	ENSPKIG00000021453	cpsf2	99	82.061	Paramormyrops_kingsleyae
ENSVPAG00000003503	CPSF2	100	95.908	ENSPSIG00000006289	CPSF2	99	95.908	Pelodiscus_sinensis
ENSVPAG00000003503	CPSF2	76	79.534	ENSPMGG00000002511	cpsf2	99	79.700	Periophthalmus_magnuspinnatus
ENSVPAG00000003503	CPSF2	100	98.848	ENSPEMG00000007917	Cpsf2	99	98.848	Peromyscus_maniculatus_bairdii
ENSVPAG00000003503	CPSF2	100	74.177	ENSPMAG00000006205	cpsf2	99	74.177	Petromyzon_marinus
ENSVPAG00000003503	CPSF2	100	98.976	ENSPCIG00000011393	CPSF2	99	98.976	Phascolarctos_cinereus
ENSVPAG00000003503	CPSF2	100	85.279	ENSPFOG00000018648	cpsf2	99	85.279	Poecilia_formosa
ENSVPAG00000003503	CPSF2	100	85.279	ENSPLAG00000019199	cpsf2	99	85.279	Poecilia_latipinna
ENSVPAG00000003503	CPSF2	96	85.658	ENSPMEG00000012100	cpsf2	99	85.658	Poecilia_mexicana
ENSVPAG00000003503	CPSF2	100	85.152	ENSPREG00000008960	cpsf2	99	85.152	Poecilia_reticulata
ENSVPAG00000003503	CPSF2	63	99.596	ENSPPYG00000029685	-	99	99.596	Pongo_abelii
ENSVPAG00000003503	CPSF2	100	99.232	ENSPCAG00000012477	CPSF2	99	99.232	Procavia_capensis
ENSVPAG00000003503	CPSF2	100	99.616	ENSPCOG00000026387	CPSF2	99	99.616	Propithecus_coquereli
ENSVPAG00000003503	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSVPAG00000003503	CPSF2	100	85.298	ENSPNYG00000023356	cpsf2	99	85.298	Pundamilia_nyererei
ENSVPAG00000003503	CPSF2	100	86.768	ENSPNAG00000001849	cpsf2	99	86.768	Pygocentrus_nattereri
ENSVPAG00000003503	CPSF2	100	98.464	ENSRNOG00000005733	Cpsf2	99	98.464	Rattus_norvegicus
ENSVPAG00000003503	CPSF2	100	99.744	ENSRBIG00000044792	CPSF2	99	99.744	Rhinopithecus_bieti
ENSVPAG00000003503	CPSF2	100	99.744	ENSRROG00000034875	CPSF2	99	99.744	Rhinopithecus_roxellana
ENSVPAG00000003503	CPSF2	100	99.616	ENSSBOG00000024571	CPSF2	99	99.616	Saimiri_boliviensis_boliviensis
ENSVPAG00000003503	CPSF2	100	99.104	ENSSHAG00000010458	CPSF2	99	99.104	Sarcophilus_harrisii
ENSVPAG00000003503	CPSF2	100	87.150	ENSSFOG00015002117	cpsf2	99	87.150	Scleropages_formosus
ENSVPAG00000003503	CPSF2	100	84.010	ENSSMAG00000002001	cpsf2	99	84.010	Scophthalmus_maximus
ENSVPAG00000003503	CPSF2	100	86.168	ENSSDUG00000004084	cpsf2	99	86.168	Seriola_dumerili
ENSVPAG00000003503	CPSF2	100	85.660	ENSSLDG00000024330	cpsf2	99	85.660	Seriola_lalandi_dorsalis
ENSVPAG00000003503	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSVPAG00000003503	CPSF2	100	95.780	ENSSPUG00000013485	CPSF2	99	95.780	Sphenodon_punctatus
ENSVPAG00000003503	CPSF2	100	85.152	ENSSPAG00000013284	cpsf2	99	85.152	Stegastes_partitus
ENSVPAG00000003503	CPSF2	100	99.616	ENSSSCG00000002447	CPSF2	99	99.616	Sus_scrofa
ENSVPAG00000003503	CPSF2	100	96.419	ENSTGUG00000012571	-	99	96.419	Taeniopygia_guttata
ENSVPAG00000003503	CPSF2	100	84.518	ENSTRUG00000003742	cpsf2	99	84.518	Takifugu_rubripes
ENSVPAG00000003503	CPSF2	100	83.418	ENSTNIG00000012228	cpsf2	99	84.177	Tetraodon_nigroviridis
ENSVPAG00000003503	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSVPAG00000003503	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSVPAG00000003503	CPSF2	100	99.872	ENSUAMG00000028071	CPSF2	99	99.872	Ursus_americanus
ENSVPAG00000003503	CPSF2	100	99.872	ENSUMAG00000005029	CPSF2	99	99.872	Ursus_maritimus
ENSVPAG00000003503	CPSF2	100	99.744	ENSVVUG00000024642	CPSF2	99	99.744	Vulpes_vulpes
ENSVPAG00000003503	CPSF2	100	92.072	ENSXETG00000010289	cpsf2	99	92.072	Xenopus_tropicalis
ENSVPAG00000003503	CPSF2	100	85.660	ENSXCOG00000001764	cpsf2	99	85.660	Xiphophorus_couchianus
ENSVPAG00000003503	CPSF2	100	85.787	ENSXMAG00000017048	cpsf2	99	85.787	Xiphophorus_maculatus