EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000003557 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 11871 bases
Position: chrGeneScaffold_489:160303-172173
Accession: 21368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000003295	zf-U11-48K	PF05253.12	5.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000003555	SNRNP48-201	864	-	ENSVPAP00000003295	287 (aa)	-	UPI00018BD871

Gene Model

Click here to download ENSVPAG00000003557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000003557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000003557	SNRNP48	99	87.633	ENSG00000168566	SNRNP48	85	87.805	Homo_sapiens
ENSVPAG00000003557	SNRNP48	77	50.435	ENSAPOG00000021430	snrnp48	69	50.000	Acanthochromis_polyacanthus
ENSVPAG00000003557	SNRNP48	99	85.763	ENSAMEG00000017349	SNRNP48	85	85.763	Ailuropoda_melanoleuca
ENSVPAG00000003557	SNRNP48	79	50.000	ENSACIG00000002032	snrnp48	68	50.000	Amphilophus_citrinellus
ENSVPAG00000003557	SNRNP48	77	50.435	ENSAOCG00000010562	snrnp48	69	50.000	Amphiprion_ocellaris
ENSVPAG00000003557	SNRNP48	71	51.923	ENSAPEG00000003231	snrnp48	68	50.427	Amphiprion_percula
ENSVPAG00000003557	SNRNP48	71	53.140	ENSATEG00000020210	snrnp48	71	49.794	Anabas_testudineus
ENSVPAG00000003557	SNRNP48	98	63.014	ENSACAG00000002811	SNRNP48	90	63.356	Anolis_carolinensis
ENSVPAG00000003557	SNRNP48	99	86.572	ENSANAG00000033538	SNRNP48	85	86.760	Aotus_nancymaae
ENSVPAG00000003557	SNRNP48	91	47.212	ENSAMXG00000015309	snrnp48	73	49.583	Astyanax_mexicanus
ENSVPAG00000003557	SNRNP48	99	87.633	ENSBTAG00000001123	SNRNP48	84	87.456	Bos_taurus
ENSVPAG00000003557	SNRNP48	99	87.279	ENSCJAG00000021330	SNRNP48	85	87.456	Callithrix_jacchus
ENSVPAG00000003557	SNRNP48	100	88.502	ENSCAFG00000009574	SNRNP48	71	88.502	Canis_familiaris
ENSVPAG00000003557	SNRNP48	100	88.850	ENSCAFG00020013203	SNRNP48	84	88.850	Canis_lupus_dingo
ENSVPAG00000003557	SNRNP48	99	89.399	ENSCHIG00000015216	SNRNP48	84	89.199	Capra_hircus
ENSVPAG00000003557	SNRNP48	99	86.316	ENSTSYG00000000698	SNRNP48	85	86.063	Carlito_syrichta
ENSVPAG00000003557	SNRNP48	99	85.664	ENSCAPG00000006768	SNRNP48	93	85.664	Cavia_aperea
ENSVPAG00000003557	SNRNP48	99	85.512	ENSCPOG00000007910	SNRNP48	84	85.664	Cavia_porcellus
ENSVPAG00000003557	SNRNP48	99	85.866	ENSCCAG00000035652	SNRNP48	85	86.063	Cebus_capucinus
ENSVPAG00000003557	SNRNP48	99	86.219	ENSCATG00000033947	SNRNP48	85	86.411	Cercocebus_atys
ENSVPAG00000003557	SNRNP48	99	85.866	ENSCLAG00000003765	SNRNP48	84	86.014	Chinchilla_lanigera
ENSVPAG00000003557	SNRNP48	100	87.456	ENSCSAG00000007409	SNRNP48	85	87.456	Chlorocebus_sabaeus
ENSVPAG00000003557	SNRNP48	99	65.552	ENSCPBG00000019146	SNRNP48	91	65.552	Chrysemys_picta_bellii
ENSVPAG00000003557	SNRNP48	90	32.576	ENSCING00000004121	-	77	32.576	Ciona_intestinalis
ENSVPAG00000003557	SNRNP48	99	86.926	ENSCANG00000030017	SNRNP48	85	87.108	Colobus_angolensis_palliatus
ENSVPAG00000003557	SNRNP48	100	84.321	ENSCGRG00001001076	-	85	84.321	Cricetulus_griseus_chok1gshd
ENSVPAG00000003557	SNRNP48	99	67.491	ENSCGRG00001008805	-	82	66.431	Cricetulus_griseus_chok1gshd
ENSVPAG00000003557	SNRNP48	100	84.321	ENSCGRG00000007781	Snrnp48	85	84.321	Cricetulus_griseus_crigri
ENSVPAG00000003557	SNRNP48	73	52.358	ENSCSEG00000000722	snrnp48	60	52.358	Cynoglossus_semilaevis
ENSVPAG00000003557	SNRNP48	93	45.139	ENSCVAG00000019829	snrnp48	79	43.182	Cyprinodon_variegatus
ENSVPAG00000003557	SNRNP48	85	46.400	ENSDARG00000039989	snrnp48	77	45.455	Danio_rerio
ENSVPAG00000003557	SNRNP48	100	87.108	ENSDNOG00000014978	SNRNP48	84	87.108	Dasypus_novemcinctus
ENSVPAG00000003557	SNRNP48	99	82.867	ENSDORG00000015140	Snrnp48	84	82.578	Dipodomys_ordii
ENSVPAG00000003557	SNRNP48	99	89.860	ENSEASG00005012021	SNRNP48	85	89.547	Equus_asinus_asinus
ENSVPAG00000003557	SNRNP48	100	90.244	ENSECAG00000026937	SNRNP48	85	90.244	Equus_caballus
ENSVPAG00000003557	SNRNP48	100	62.847	ENSEEUG00000015437	SNRNP48	84	63.194	Erinaceus_europaeus
ENSVPAG00000003557	SNRNP48	87	49.416	ENSELUG00000009766	snrnp48	65	51.489	Esox_lucius
ENSVPAG00000003557	SNRNP48	100	89.547	ENSFCAG00000018853	SNRNP48	85	89.547	Felis_catus
ENSVPAG00000003557	SNRNP48	99	64.384	ENSFALG00000007797	SNRNP48	93	64.384	Ficedula_albicollis
ENSVPAG00000003557	SNRNP48	99	84.211	ENSFDAG00000009231	SNRNP48	84	83.916	Fukomys_damarensis
ENSVPAG00000003557	SNRNP48	70	54.187	ENSFHEG00000014647	snrnp48	82	51.046	Fundulus_heteroclitus
ENSVPAG00000003557	SNRNP48	70	52.451	ENSGMOG00000018599	-	80	48.810	Gadus_morhua
ENSVPAG00000003557	SNRNP48	91	67.037	ENSGALG00000013005	SNRNP48	91	67.037	Gallus_gallus
ENSVPAG00000003557	SNRNP48	71	52.404	ENSGAFG00000021639	snrnp48	68	49.580	Gambusia_affinis
ENSVPAG00000003557	SNRNP48	69	52.475	ENSGACG00000017756	-	74	48.413	Gasterosteus_aculeatus
ENSVPAG00000003557	SNRNP48	99	64.883	ENSGAGG00000000865	SNRNP48	97	64.883	Gopherus_agassizii
ENSVPAG00000003557	SNRNP48	99	87.279	ENSGGOG00000013220	SNRNP48	85	87.456	Gorilla_gorilla
ENSVPAG00000003557	SNRNP48	70	51.724	ENSHBUG00000017066	snrnp48	66	49.138	Haplochromis_burtoni
ENSVPAG00000003557	SNRNP48	99	85.614	ENSHGLG00000015241	SNRNP48	84	85.315	Heterocephalus_glaber_female
ENSVPAG00000003557	SNRNP48	99	85.614	ENSHGLG00100010027	SNRNP48	84	85.315	Heterocephalus_glaber_male
ENSVPAG00000003557	SNRNP48	70	50.739	ENSHCOG00000014066	snrnp48	71	46.586	Hippocampus_comes
ENSVPAG00000003557	SNRNP48	100	88.153	ENSSTOG00000014635	SNRNP48	85	88.153	Ictidomys_tridecemlineatus
ENSVPAG00000003557	SNRNP48	100	80.488	ENSJJAG00000011495	Snrnp48	85	80.488	Jaculus_jaculus
ENSVPAG00000003557	SNRNP48	89	46.124	ENSKMAG00000016514	snrnp48	71	47.308	Kryptolebias_marmoratus
ENSVPAG00000003557	SNRNP48	77	51.111	ENSLBEG00000026249	snrnp48	71	50.000	Labrus_bergylta
ENSVPAG00000003557	SNRNP48	100	54.608	ENSLACG00000003958	SNRNP48	81	54.093	Latimeria_chalumnae
ENSVPAG00000003557	SNRNP48	82	52.479	ENSLOCG00000004187	snrnp48	82	48.958	Lepisosteus_oculatus
ENSVPAG00000003557	SNRNP48	99	84.452	ENSLAFG00000011152	SNRNP48	85	84.669	Loxodonta_africana
ENSVPAG00000003557	SNRNP48	99	87.279	ENSMFAG00000045216	SNRNP48	85	87.456	Macaca_fascicularis
ENSVPAG00000003557	SNRNP48	99	87.279	ENSMMUG00000014785	SNRNP48	85	87.456	Macaca_mulatta
ENSVPAG00000003557	SNRNP48	99	86.926	ENSMNEG00000042269	SNRNP48	85	87.108	Macaca_nemestrina
ENSVPAG00000003557	SNRNP48	99	87.279	ENSMLEG00000034004	SNRNP48	85	87.456	Mandrillus_leucophaeus
ENSVPAG00000003557	SNRNP48	72	51.659	ENSMAMG00000018673	snrnp48	60	50.431	Mastacembelus_armatus
ENSVPAG00000003557	SNRNP48	98	63.481	ENSMGAG00000006037	SNRNP48	99	64.384	Meleagris_gallopavo
ENSVPAG00000003557	SNRNP48	100	83.972	ENSMAUG00000011944	Snrnp48	85	83.972	Mesocricetus_auratus
ENSVPAG00000003557	SNRNP48	99	86.219	ENSMICG00000012497	SNRNP48	85	86.411	Microcebus_murinus
ENSVPAG00000003557	SNRNP48	100	83.624	ENSMOCG00000015555	Snrnp48	85	83.624	Microtus_ochrogaster
ENSVPAG00000003557	SNRNP48	64	52.688	ENSMMOG00000003072	-	58	52.688	Mola_mola
ENSVPAG00000003557	SNRNP48	99	71.088	ENSMODG00000009996	SNRNP48	80	71.088	Monodelphis_domestica
ENSVPAG00000003557	SNRNP48	74	53.488	ENSMALG00000005725	snrnp48	70	51.046	Monopterus_albus
ENSVPAG00000003557	SNRNP48	100	82.927	MGP_CAROLIEiJ_G0018441	Snrnp48	85	82.927	Mus_caroli
ENSVPAG00000003557	SNRNP48	100	82.578	ENSMUSG00000021431	Snrnp48	85	82.578	Mus_musculus
ENSVPAG00000003557	SNRNP48	100	82.927	MGP_PahariEiJ_G0019509	Snrnp48	85	82.927	Mus_pahari
ENSVPAG00000003557	SNRNP48	100	81.882	MGP_SPRETEiJ_G0019321	Snrnp48	85	81.882	Mus_spretus
ENSVPAG00000003557	SNRNP48	99	83.916	ENSNGAG00000004849	Snrnp48	84	83.916	Nannospalax_galili
ENSVPAG00000003557	SNRNP48	70	51.232	ENSNBRG00000012127	snrnp48	66	48.707	Neolamprologus_brichardi
ENSVPAG00000003557	SNRNP48	99	87.633	ENSNLEG00000011667	SNRNP48	85	87.805	Nomascus_leucogenys
ENSVPAG00000003557	SNRNP48	94	78.229	ENSOPRG00000015471	SNRNP48	82	79.087	Ochotona_princeps
ENSVPAG00000003557	SNRNP48	70	51.724	ENSONIG00000001520	snrnp48	66	49.138	Oreochromis_niloticus
ENSVPAG00000003557	SNRNP48	50	72.222	ENSOANG00000019888	-	70	72.603	Ornithorhynchus_anatinus
ENSVPAG00000003557	SNRNP48	87	88.000	ENSOCUG00000005168	SNRNP48	83	88.095	Oryctolagus_cuniculus
ENSVPAG00000003557	SNRNP48	86	50.980	ENSORLG00000015654	snrnp48	68	52.321	Oryzias_latipes
ENSVPAG00000003557	SNRNP48	86	50.196	ENSORLG00020015976	snrnp48	58	51.477	Oryzias_latipes_hni
ENSVPAG00000003557	SNRNP48	86	51.373	ENSORLG00015022379	snrnp48	58	52.743	Oryzias_latipes_hsok
ENSVPAG00000003557	SNRNP48	96	45.775	ENSOMEG00000022007	snrnp48	81	46.599	Oryzias_melastigma
ENSVPAG00000003557	SNRNP48	93	88.722	ENSOGAG00000005275	SNRNP48	80	89.015	Otolemur_garnettii
ENSVPAG00000003557	SNRNP48	100	87.805	ENSOARG00000017319	SNRNP48	100	87.805	Ovis_aries
ENSVPAG00000003557	SNRNP48	99	87.633	ENSPPAG00000032873	SNRNP48	85	87.805	Pan_paniscus
ENSVPAG00000003557	SNRNP48	100	89.895	ENSPPRG00000004283	SNRNP48	85	89.895	Panthera_pardus
ENSVPAG00000003557	SNRNP48	100	89.895	ENSPTIG00000013502	SNRNP48	100	89.895	Panthera_tigris_altaica
ENSVPAG00000003557	SNRNP48	99	87.633	ENSPTRG00000017703	SNRNP48	85	87.805	Pan_troglodytes
ENSVPAG00000003557	SNRNP48	99	87.279	ENSPANG00000000771	SNRNP48	85	87.456	Papio_anubis
ENSVPAG00000003557	SNRNP48	98	48.065	ENSPKIG00000013703	snrnp48	52	52.632	Paramormyrops_kingsleyae
ENSVPAG00000003557	SNRNP48	99	62.207	ENSPSIG00000002213	SNRNP48	94	62.626	Pelodiscus_sinensis
ENSVPAG00000003557	SNRNP48	72	50.952	ENSPMGG00000008120	snrnp48	73	50.952	Periophthalmus_magnuspinnatus
ENSVPAG00000003557	SNRNP48	100	84.669	ENSPEMG00000008872	Snrnp48	85	84.669	Peromyscus_maniculatus_bairdii
ENSVPAG00000003557	SNRNP48	70	54.634	ENSPFOG00000003578	snrnp48	59	54.634	Poecilia_formosa
ENSVPAG00000003557	SNRNP48	63	53.514	ENSPLAG00000002290	snrnp48	63	53.514	Poecilia_latipinna
ENSVPAG00000003557	SNRNP48	70	53.659	ENSPMEG00000018033	snrnp48	59	53.659	Poecilia_mexicana
ENSVPAG00000003557	SNRNP48	69	53.465	ENSPREG00000018541	snrnp48	68	50.840	Poecilia_reticulata
ENSVPAG00000003557	SNRNP48	99	85.866	ENSPPYG00000016209	SNRNP48	85	86.063	Pongo_abelii
ENSVPAG00000003557	SNRNP48	73	66.190	ENSPCAG00000011991	SNRNP48	80	66.822	Procavia_capensis
ENSVPAG00000003557	SNRNP48	99	87.633	ENSPVAG00000002854	SNRNP48	85	87.805	Pteropus_vampyrus
ENSVPAG00000003557	SNRNP48	70	52.217	ENSPNYG00000015399	snrnp48	78	46.444	Pundamilia_nyererei
ENSVPAG00000003557	SNRNP48	100	83.972	ENSRNOG00000013756	Snrnp48	85	83.972	Rattus_norvegicus
ENSVPAG00000003557	SNRNP48	87	89.243	ENSRBIG00000043856	SNRNP48	81	89.412	Rhinopithecus_bieti
ENSVPAG00000003557	SNRNP48	99	86.926	ENSRROG00000043229	SNRNP48	85	87.108	Rhinopithecus_roxellana
ENSVPAG00000003557	SNRNP48	99	86.572	ENSSBOG00000019486	SNRNP48	85	86.760	Saimiri_boliviensis_boliviensis
ENSVPAG00000003557	SNRNP48	99	70.990	ENSSHAG00000014483	SNRNP48	84	70.990	Sarcophilus_harrisii
ENSVPAG00000003557	SNRNP48	71	55.825	ENSSFOG00015006610	snrnp48	59	52.610	Scleropages_formosus
ENSVPAG00000003557	SNRNP48	85	48.583	ENSSDUG00000014953	snrnp48	67	49.569	Seriola_dumerili
ENSVPAG00000003557	SNRNP48	85	48.387	ENSSLDG00000005989	snrnp48	68	50.000	Seriola_lalandi_dorsalis
ENSVPAG00000003557	SNRNP48	99	62.963	ENSSPUG00000006257	SNRNP48	85	62.963	Sphenodon_punctatus
ENSVPAG00000003557	SNRNP48	70	51.724	ENSSPAG00000006454	snrnp48	69	49.580	Stegastes_partitus
ENSVPAG00000003557	SNRNP48	99	62.887	ENSTGUG00000007575	SNRNP48	93	62.887	Taeniopygia_guttata
ENSVPAG00000003557	SNRNP48	69	54.455	ENSTRUG00000007031	snrnp48	68	52.119	Takifugu_rubripes
ENSVPAG00000003557	SNRNP48	69	50.990	ENSTNIG00000012977	-	61	50.739	Tetraodon_nigroviridis
ENSVPAG00000003557	SNRNP48	100	70.383	ENSTBEG00000015620	SNRNP48	63	88.318	Tupaia_belangeri
ENSVPAG00000003557	SNRNP48	99	89.046	ENSTTRG00000016715	SNRNP48	85	88.850	Tursiops_truncatus
ENSVPAG00000003557	SNRNP48	100	88.502	ENSUAMG00000003690	SNRNP48	85	88.502	Ursus_americanus
ENSVPAG00000003557	SNRNP48	100	88.502	ENSVVUG00000004996	SNRNP48	84	88.502	Vulpes_vulpes
ENSVPAG00000003557	SNRNP48	87	56.371	ENSXETG00000020447	snrnp48	87	53.846	Xenopus_tropicalis
ENSVPAG00000003557	SNRNP48	64	52.688	ENSXCOG00000004478	snrnp48	58	51.832	Xiphophorus_couchianus
ENSVPAG00000003557	SNRNP48	71	52.885	ENSXMAG00000013595	snrnp48	60	52.857	Xiphophorus_maculatus