EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000003726 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 52800 bases
Position: chrGeneScaffold_581:19395-72194
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000003456	efThoc1	PF11957.8	2.7e-61	1	2
ENSVPAP00000003456	efThoc1	PF11957.8	2.7e-61	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000003726	-	1974	-	ENSVPAP00000003456	657 (aa)	-	UPI00018BD330

Gene Model

Click here to download ENSVPAG00000003726's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000003726's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000003726	-	77	97.000	ENSG00000079134	THOC1	77	97.000	Homo_sapiens
ENSVPAG00000003726	-	77	97.500	ENSAMEG00000006645	THOC1	77	97.500	Ailuropoda_melanoleuca
ENSVPAG00000003726	-	54	80.124	ENSACIG00000019392	thoc1	57	80.124	Amphilophus_citrinellus
ENSVPAG00000003726	-	66	66.803	ENSAOCG00000008391	thoc1	71	66.803	Amphiprion_ocellaris
ENSVPAG00000003726	-	66	67.500	ENSAPEG00000001093	thoc1	67	67.500	Amphiprion_percula
ENSVPAG00000003726	-	66	68.050	ENSATEG00000004783	thoc1	71	65.464	Anabas_testudineus
ENSVPAG00000003726	-	67	86.634	ENSAPLG00000016149	THOC1	67	86.634	Anas_platyrhynchos
ENSVPAG00000003726	-	77	86.000	ENSACAG00000008307	THOC1	75	81.000	Anolis_carolinensis
ENSVPAG00000003726	-	77	97.000	ENSANAG00000033200	THOC1	76	97.000	Aotus_nancymaae
ENSVPAG00000003726	-	66	67.220	ENSACLG00000016836	thoc1	67	67.220	Astatotilapia_calliptera
ENSVPAG00000003726	-	64	66.327	ENSAMXG00000014708	thoc1	68	66.327	Astyanax_mexicanus
ENSVPAG00000003726	-	77	97.000	ENSBTAG00000019215	THOC1	77	97.000	Bos_taurus
ENSVPAG00000003726	-	77	97.500	ENSCJAG00000020450	THOC1	77	97.500	Callithrix_jacchus
ENSVPAG00000003726	-	77	97.500	ENSCAFG00000018324	THOC1	84	97.500	Canis_familiaris
ENSVPAG00000003726	-	77	97.500	ENSCAFG00020017894	THOC1	77	97.500	Canis_lupus_dingo
ENSVPAG00000003726	-	77	97.000	ENSCHIG00000015399	THOC1	77	97.000	Capra_hircus
ENSVPAG00000003726	-	77	96.500	ENSTSYG00000010585	THOC1	77	96.500	Carlito_syrichta
ENSVPAG00000003726	-	66	88.083	ENSCAPG00000016270	THOC1	73	88.083	Cavia_aperea
ENSVPAG00000003726	-	77	94.000	ENSCPOG00000000959	THOC1	77	94.000	Cavia_porcellus
ENSVPAG00000003726	-	77	97.500	ENSCCAG00000025766	THOC1	77	97.500	Cebus_capucinus
ENSVPAG00000003726	-	77	97.500	ENSCATG00000028180	THOC1	78	97.500	Cercocebus_atys
ENSVPAG00000003726	-	67	94.500	ENSCLAG00000009117	THOC1	69	94.500	Chinchilla_lanigera
ENSVPAG00000003726	-	77	97.500	ENSCSAG00000017631	THOC1	77	97.500	Chlorocebus_sabaeus
ENSVPAG00000003726	-	73	95.429	ENSCHOG00000010609	THOC1	73	95.429	Choloepus_hoffmanni
ENSVPAG00000003726	-	77	91.542	ENSCPBG00000027558	THOC1	77	91.542	Chrysemys_picta_bellii
ENSVPAG00000003726	-	51	62.838	ENSCSAVG00000010649	-	55	62.838	Ciona_savignyi
ENSVPAG00000003726	-	77	97.000	ENSCANG00000034265	THOC1	78	97.000	Colobus_angolensis_palliatus
ENSVPAG00000003726	-	77	95.500	ENSCGRG00001016464	Thoc1	77	95.500	Cricetulus_griseus_chok1gshd
ENSVPAG00000003726	-	67	95.500	ENSCGRG00000010269	-	69	95.500	Cricetulus_griseus_crigri
ENSVPAG00000003726	-	67	91.089	ENSCGRG00000003390	-	72	91.089	Cricetulus_griseus_crigri
ENSVPAG00000003726	-	66	65.574	ENSCSEG00000012486	thoc1	71	65.574	Cynoglossus_semilaevis
ENSVPAG00000003726	-	66	65.816	ENSCVAG00000020600	thoc1	67	65.816	Cyprinodon_variegatus
ENSVPAG00000003726	-	66	67.500	ENSDARG00000088246	thoc1	66	67.500	Danio_rerio
ENSVPAG00000003726	-	77	95.500	ENSDNOG00000019217	THOC1	77	95.500	Dasypus_novemcinctus
ENSVPAG00000003726	-	67	94.500	ENSDORG00000008060	Thoc1	68	94.500	Dipodomys_ordii
ENSVPAG00000003726	-	68	77.698	ENSETEG00000004165	THOC1	75	77.698	Echinops_telfairi
ENSVPAG00000003726	-	67	62.551	ENSEBUG00000005998	thoc1	71	62.551	Eptatretus_burgeri
ENSVPAG00000003726	-	77	97.500	ENSEASG00005002549	THOC1	74	97.500	Equus_asinus_asinus
ENSVPAG00000003726	-	77	97.500	ENSECAG00000009267	THOC1	69	97.500	Equus_caballus
ENSVPAG00000003726	-	67	78.500	ENSEEUG00000012214	-	69	78.500	Erinaceus_europaeus
ENSVPAG00000003726	-	67	68.500	ENSELUG00000023277	thoc1	68	68.159	Esox_lucius
ENSVPAG00000003726	-	77	97.000	ENSFCAG00000022454	THOC1	67	97.000	Felis_catus
ENSVPAG00000003726	-	67	88.557	ENSFALG00000006205	THOC1	69	88.557	Ficedula_albicollis
ENSVPAG00000003726	-	67	94.500	ENSFDAG00000006842	THOC1	68	94.500	Fukomys_damarensis
ENSVPAG00000003726	-	66	65.641	ENSFHEG00000008841	thoc1	72	65.641	Fundulus_heteroclitus
ENSVPAG00000003726	-	66	68.465	ENSGMOG00000011486	thoc1	67	68.465	Gadus_morhua
ENSVPAG00000003726	-	77	87.562	ENSGALG00000014915	THOC1	76	87.562	Gallus_gallus
ENSVPAG00000003726	-	66	65.145	ENSGAFG00000021464	thoc1	71	65.145	Gambusia_affinis
ENSVPAG00000003726	-	67	67.500	ENSGACG00000017361	thoc1	67	67.500	Gasterosteus_aculeatus
ENSVPAG00000003726	-	77	91.542	ENSGAGG00000021230	-	78	91.542	Gopherus_agassizii
ENSVPAG00000003726	-	77	97.000	ENSGGOG00000003013	THOC1	77	97.000	Gorilla_gorilla
ENSVPAG00000003726	-	66	67.220	ENSHBUG00000009096	thoc1	67	67.220	Haplochromis_burtoni
ENSVPAG00000003726	-	77	93.000	ENSHGLG00000003712	-	77	93.000	Heterocephalus_glaber_female
ENSVPAG00000003726	-	59	98.507	ENSHGLG00000009264	-	85	98.507	Heterocephalus_glaber_female
ENSVPAG00000003726	-	77	93.500	ENSHGLG00100003570	THOC1	77	93.500	Heterocephalus_glaber_male
ENSVPAG00000003726	-	66	87.047	ENSHGLG00100002225	-	87	87.047	Heterocephalus_glaber_male
ENSVPAG00000003726	-	57	64.948	ENSIPUG00000005306	thoc1	65	64.835	Ictalurus_punctatus
ENSVPAG00000003726	-	77	97.000	ENSSTOG00000006484	THOC1	77	97.000	Ictidomys_tridecemlineatus
ENSVPAG00000003726	-	67	66.390	ENSKMAG00000003904	thoc1	68	65.672	Kryptolebias_marmoratus
ENSVPAG00000003726	-	66	69.295	ENSLBEG00000020372	thoc1	65	69.295	Labrus_bergylta
ENSVPAG00000003726	-	77	77.114	ENSLACG00000014869	THOC1	77	74.000	Latimeria_chalumnae
ENSVPAG00000003726	-	66	74.742	ENSLOCG00000002097	thoc1	66	72.539	Lepisosteus_oculatus
ENSVPAG00000003726	-	77	95.500	ENSLAFG00000009585	THOC1	77	95.500	Loxodonta_africana
ENSVPAG00000003726	-	77	97.500	ENSMFAG00000041520	THOC1	77	97.500	Macaca_fascicularis
ENSVPAG00000003726	-	77	97.500	ENSMMUG00000004662	THOC1	77	97.500	Macaca_mulatta
ENSVPAG00000003726	-	77	97.500	ENSMNEG00000040177	THOC1	77	97.500	Macaca_nemestrina
ENSVPAG00000003726	-	77	97.500	ENSMLEG00000034201	THOC1	77	97.500	Mandrillus_leucophaeus
ENSVPAG00000003726	-	66	67.213	ENSMAMG00000016747	thoc1	70	67.213	Mastacembelus_armatus
ENSVPAG00000003726	-	66	67.220	ENSMZEG00005024609	thoc1	67	67.220	Maylandia_zebra
ENSVPAG00000003726	-	67	87.562	ENSMGAG00000009811	THOC1	70	87.562	Meleagris_gallopavo
ENSVPAG00000003726	-	77	94.500	ENSMAUG00000010272	Thoc1	77	94.500	Mesocricetus_auratus
ENSVPAG00000003726	-	77	95.500	ENSMICG00000027200	THOC1	77	95.500	Microcebus_murinus
ENSVPAG00000003726	-	77	89.447	ENSMOCG00000014536	-	66	89.447	Microtus_ochrogaster
ENSVPAG00000003726	-	77	89.000	ENSMOCG00000014924	-	73	89.000	Microtus_ochrogaster
ENSVPAG00000003726	-	66	67.220	ENSMMOG00000011772	thoc1	72	67.220	Mola_mola
ENSVPAG00000003726	-	77	94.527	ENSMODG00000021482	THOC1	77	94.527	Monodelphis_domestica
ENSVPAG00000003726	-	66	67.220	ENSMALG00000021872	thoc1	70	66.524	Monopterus_albus
ENSVPAG00000003726	-	77	93.000	MGP_CAROLIEiJ_G0021989	Thoc1	77	93.000	Mus_caroli
ENSVPAG00000003726	-	77	93.500	ENSMUSG00000024287	Thoc1	79	93.500	Mus_musculus
ENSVPAG00000003726	-	77	93.500	MGP_PahariEiJ_G0018726	Thoc1	77	93.500	Mus_pahari
ENSVPAG00000003726	-	77	93.500	MGP_SPRETEiJ_G0022905	Thoc1	77	93.500	Mus_spretus
ENSVPAG00000003726	-	77	97.000	ENSMPUG00000005448	THOC1	77	97.000	Mustela_putorius_furo
ENSVPAG00000003726	-	77	95.000	ENSMLUG00000004090	-	77	95.000	Myotis_lucifugus
ENSVPAG00000003726	-	67	75.758	ENSMLUG00000027965	-	73	75.000	Myotis_lucifugus
ENSVPAG00000003726	-	77	95.500	ENSNGAG00000001401	-	77	95.500	Nannospalax_galili
ENSVPAG00000003726	-	67	79.188	ENSNGAG00000008061	-	66	79.188	Nannospalax_galili
ENSVPAG00000003726	-	66	67.635	ENSNBRG00000005991	thoc1	69	67.635	Neolamprologus_brichardi
ENSVPAG00000003726	-	77	97.500	ENSNLEG00000006835	THOC1	77	97.500	Nomascus_leucogenys
ENSVPAG00000003726	-	67	80.247	ENSMEUG00000009756	THOC1	69	80.247	Notamacropus_eugenii
ENSVPAG00000003726	-	60	95.930	ENSOPRG00000001108	THOC1	61	95.930	Ochotona_princeps
ENSVPAG00000003726	-	77	93.000	ENSODEG00000006623	THOC1	76	93.000	Octodon_degus
ENSVPAG00000003726	-	67	68.201	ENSONIG00000009440	thoc1	67	68.201	Oreochromis_niloticus
ENSVPAG00000003726	-	77	97.000	ENSOCUG00000011601	THOC1	77	97.000	Oryctolagus_cuniculus
ENSVPAG00000003726	-	66	66.805	ENSORLG00000017629	thoc1	67	66.805	Oryzias_latipes
ENSVPAG00000003726	-	66	66.805	ENSORLG00020007567	thoc1	67	66.805	Oryzias_latipes_hni
ENSVPAG00000003726	-	66	66.805	ENSORLG00015007356	thoc1	69	66.393	Oryzias_latipes_hsok
ENSVPAG00000003726	-	66	65.306	ENSOMEG00000008200	thoc1	77	65.641	Oryzias_melastigma
ENSVPAG00000003726	-	76	87.179	ENSOGAG00000000470	THOC1	76	87.179	Otolemur_garnettii
ENSVPAG00000003726	-	67	97.000	ENSOARG00000009238	THOC1	67	97.000	Ovis_aries
ENSVPAG00000003726	-	77	97.000	ENSPPAG00000031812	THOC1	77	97.000	Pan_paniscus
ENSVPAG00000003726	-	77	97.000	ENSPPRG00000023794	THOC1	77	97.000	Panthera_pardus
ENSVPAG00000003726	-	77	97.000	ENSPTIG00000007469	THOC1	77	97.000	Panthera_tigris_altaica
ENSVPAG00000003726	-	77	97.500	ENSPTRG00000009816	THOC1	76	97.500	Pan_troglodytes
ENSVPAG00000003726	-	77	97.500	ENSPANG00000008665	THOC1	77	97.500	Papio_anubis
ENSVPAG00000003726	-	66	69.008	ENSPKIG00000005906	thoc1	67	69.008	Paramormyrops_kingsleyae
ENSVPAG00000003726	-	58	92.040	ENSPSIG00000007691	THOC1	70	92.040	Pelodiscus_sinensis
ENSVPAG00000003726	-	65	68.103	ENSPMGG00000008279	thoc1	68	68.103	Periophthalmus_magnuspinnatus
ENSVPAG00000003726	-	77	94.500	ENSPEMG00000021789	Thoc1	77	94.500	Peromyscus_maniculatus_bairdii
ENSVPAG00000003726	-	53	95.025	ENSPCIG00000026942	THOC1	75	95.025	Phascolarctos_cinereus
ENSVPAG00000003726	-	66	65.306	ENSPFOG00000011673	thoc1	67	65.306	Poecilia_formosa
ENSVPAG00000003726	-	66	65.417	ENSPLAG00000019648	thoc1	67	65.417	Poecilia_latipinna
ENSVPAG00000003726	-	66	65.128	ENSPMEG00000007083	thoc1	67	65.128	Poecilia_mexicana
ENSVPAG00000003726	-	66	65.145	ENSPREG00000006719	thoc1	67	65.145	Poecilia_reticulata
ENSVPAG00000003726	-	51	100.000	ENSPPYG00000009049	-	68	100.000	Pongo_abelii
ENSVPAG00000003726	-	77	70.588	ENSPCAG00000005320	THOC1	77	70.588	Procavia_capensis
ENSVPAG00000003726	-	77	96.000	ENSPCOG00000009234	THOC1	77	96.000	Propithecus_coquereli
ENSVPAG00000003726	-	77	97.500	ENSPVAG00000004007	THOC1	79	97.500	Pteropus_vampyrus
ENSVPAG00000003726	-	66	67.220	ENSPNYG00000019152	thoc1	67	67.220	Pundamilia_nyererei
ENSVPAG00000003726	-	66	67.692	ENSPNAG00000023390	thoc1	67	67.692	Pygocentrus_nattereri
ENSVPAG00000003726	-	77	93.500	ENSRNOG00000015332	Thoc1	84	93.500	Rattus_norvegicus
ENSVPAG00000003726	-	77	97.500	ENSRBIG00000033738	THOC1	78	97.500	Rhinopithecus_bieti
ENSVPAG00000003726	-	77	97.500	ENSRROG00000044988	THOC1	78	97.500	Rhinopithecus_roxellana
ENSVPAG00000003726	-	77	97.000	ENSSBOG00000016556	THOC1	77	97.000	Saimiri_boliviensis_boliviensis
ENSVPAG00000003726	-	77	94.030	ENSSHAG00000014829	THOC1	77	94.030	Sarcophilus_harrisii
ENSVPAG00000003726	-	66	69.583	ENSSFOG00015021527	thoc1	67	69.583	Scleropages_formosus
ENSVPAG00000003726	-	66	65.641	ENSSMAG00000018465	thoc1	67	65.641	Scophthalmus_maximus
ENSVPAG00000003726	-	66	67.347	ENSSDUG00000016810	thoc1	67	67.347	Seriola_dumerili
ENSVPAG00000003726	-	66	66.939	ENSSLDG00000015555	thoc1	67	66.939	Seriola_lalandi_dorsalis
ENSVPAG00000003726	-	65	96.000	ENSSARG00000006910	THOC1	65	96.000	Sorex_araneus
ENSVPAG00000003726	-	66	90.909	ENSSPUG00000007238	THOC1	76	90.909	Sphenodon_punctatus
ENSVPAG00000003726	-	64	67.500	ENSSPAG00000018847	thoc1	66	67.500	Stegastes_partitus
ENSVPAG00000003726	-	77	97.500	ENSSSCG00000025653	THOC1	76	97.500	Sus_scrofa
ENSVPAG00000003726	-	77	87.562	ENSTGUG00000010204	THOC1	77	87.562	Taeniopygia_guttata
ENSVPAG00000003726	-	66	67.220	ENSTRUG00000013518	thoc1	67	67.220	Takifugu_rubripes
ENSVPAG00000003726	-	66	67.220	ENSTNIG00000008473	thoc1	66	67.220	Tetraodon_nigroviridis
ENSVPAG00000003726	-	77	92.000	ENSTBEG00000016920	THOC1	78	92.000	Tupaia_belangeri
ENSVPAG00000003726	-	77	97.500	ENSTTRG00000016664	THOC1	77	97.500	Tursiops_truncatus
ENSVPAG00000003726	-	77	97.500	ENSUAMG00000002527	THOC1	81	97.500	Ursus_americanus
ENSVPAG00000003726	-	77	97.500	ENSUMAG00000019693	THOC1	77	97.500	Ursus_maritimus
ENSVPAG00000003726	-	77	97.500	ENSVVUG00000004384	THOC1	77	97.500	Vulpes_vulpes
ENSVPAG00000003726	-	67	72.772	ENSXETG00000003155	thoc1	66	72.772	Xenopus_tropicalis
ENSVPAG00000003726	-	66	65.145	ENSXCOG00000016085	thoc1	67	65.145	Xiphophorus_couchianus
ENSVPAG00000003726	-	66	65.145	ENSXMAG00000002353	thoc1	67	65.145	Xiphophorus_maculatus