EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSVPAG00000004007 (Gene tree)
Gene ID
-
Gene Symbol
AFF1
Alias
AF-4|AF4|MLLT2|PBM1
Full Name
AF4/FMR2 family member 1
Gene Type
protein_coding
Species
Vicugna_pacos
Status
putative
Strand
Plus strand
Length
204104 bases
Position
chrGeneScaffold_2384:107286-311389
Accession
7135
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVPAP00000003724AF-4PF05110.13011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVPAT00000004007AFF1-2013594-ENSVPAP000000037241197 (aa)-UPI00018BE219
Gene Model
Click here to download ENSVPAG00000004007's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000004007's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVPAG00000004007AFF18137.688ENSG00000072364AFF46035.655Homo_sapiens
ENSVPAG00000004007AFF18361.972ENSAPOG00000006096aff48461.972Acanthochromis_polyacanthus
ENSVPAG00000004007AFF19976.260ENSAMEG00000003337AFF110075.854Ailuropoda_melanoleuca
ENSVPAG00000004007AFF17638.176ENSAMEG00000017764AFF45935.376Ailuropoda_melanoleuca
ENSVPAG00000004007AFF18035.070ENSAOCG00000008476aff47935.367Amphiprion_ocellaris
ENSVPAG00000004007AFF18034.970ENSAPEG00000018275aff47935.367Amphiprion_percula
ENSVPAG00000004007AFF17835.895ENSATEG00000010963aff45932.742Anabas_testudineus
ENSVPAG00000004007AFF19952.195ENSAPLG00000004059AFF110051.752Anas_platyrhynchos
ENSVPAG00000004007AFF19936.571ENSAPLG00000011166AFF45933.425Anas_platyrhynchos
ENSVPAG00000004007AFF15146.520ENSAPLG00000003660-6347.059Anas_platyrhynchos
ENSVPAG00000004007AFF19935.280ENSACAG00000022605AFF45932.455Anolis_carolinensis
ENSVPAG00000004007AFF17934.061ENSACAG00000010688AFF26231.800Anolis_carolinensis
ENSVPAG00000004007AFF15850.621ENSACAG00000012192AFF19947.665Anolis_carolinensis
ENSVPAG00000004007AFF15471.064ENSANAG00000017095AFF110075.452Aotus_nancymaae
ENSVPAG00000004007AFF17449.749ENSANAG00000037761AFF49340.047Aotus_nancymaae
ENSVPAG00000004007AFF18034.006ENSACLG00000011879aff47834.175Astatotilapia_calliptera
ENSVPAG00000004007AFF15959.459ENSBTAG00000012449AFF35759.459Bos_taurus
ENSVPAG00000004007AFF19936.579ENSBTAG00000009482AFF45935.368Bos_taurus
ENSVPAG00000004007AFF15879.635ENSBTAG00000018488AFF110079.772Bos_taurus
ENSVPAG00000004007AFF18037.576ENSCJAG00000013322AFF49340.047Callithrix_jacchus
ENSVPAG00000004007AFF15871.287ENSCJAG00000006047AFF110074.384Callithrix_jacchus
ENSVPAG00000004007AFF18256.164ENSCAFG00000000930AFF46135.440Canis_familiaris
ENSVPAG00000004007AFF16456.164ENSCAFG00020000956AFF47161.607Canis_lupus_dingo
ENSVPAG00000004007AFF15880.845ENSCHIG00000008450AFF110079.673Capra_hircus
ENSVPAG00000004007AFF19934.424ENSCHIG00000015153AFF46135.188Capra_hircus
ENSVPAG00000004007AFF19956.092ENSCAPG00000006540AFF15959.497Cavia_aperea
ENSVPAG00000004007AFF16360.000ENSCAPG00000013980AFF49232.170Cavia_aperea
ENSVPAG00000004007AFF19961.948ENSCPOG00000034568AFF19961.639Cavia_porcellus
ENSVPAG00000004007AFF19081.912ENSCCAG00000027623AFF19782.171Cebus_capucinus
ENSVPAG00000004007AFF17449.749ENSCCAG00000030353AFF49739.541Cebus_capucinus
ENSVPAG00000004007AFF17447.236ENSCATG00000044510AFF49239.846Cercocebus_atys
ENSVPAG00000004007AFF19084.496ENSCATG00000039501AFF19384.496Cercocebus_atys
ENSVPAG00000004007AFF18037.538ENSCLAG00000013850AFF46034.868Chinchilla_lanigera
ENSVPAG00000004007AFF19962.206ENSCLAG00000005537AFF19962.063Chinchilla_lanigera
ENSVPAG00000004007AFF18037.640ENSCSAG00000013682AFF46035.655Chlorocebus_sabaeus
ENSVPAG00000004007AFF15874.221ENSCSAG00000004333AFF110075.842Chlorocebus_sabaeus
ENSVPAG00000004007AFF16679.710ENSCHOG00000000041AFF17878.099Choloepus_hoffmanni
ENSVPAG00000004007AFF110054.781ENSCPBG00000005382AFF110054.170Chrysemys_picta_bellii
ENSVPAG00000004007AFF15874.504ENSCANG00000037514AFF110075.698Colobus_angolensis_palliatus
ENSVPAG00000004007AFF18037.843ENSCANG00000030350AFF46035.933Colobus_angolensis_palliatus
ENSVPAG00000004007AFF17637.913ENSCGRG00001016680Aff46134.916Cricetulus_griseus_chok1gshd
ENSVPAG00000004007AFF15861.528ENSCGRG00000004837Aff18562.074Cricetulus_griseus_crigri
ENSVPAG00000004007AFF17637.301ENSCGRG00000008529Aff46034.958Cricetulus_griseus_crigri
ENSVPAG00000004007AFF16956.489ENSCSEG00000017002aff46958.772Cynoglossus_semilaevis
ENSVPAG00000004007AFF18559.722ENSDARG00000001857aff48659.722Danio_rerio
ENSVPAG00000004007AFF15873.446ENSDNOG00000048783-10071.478Dasypus_novemcinctus
ENSVPAG00000004007AFF17637.913ENSDNOG00000016669AFF46035.097Dasypus_novemcinctus
ENSVPAG00000004007AFF15870.739ENSDORG00000013881Aff110070.539Dipodomys_ordii
ENSVPAG00000004007AFF15058.108ENSDORG00000007294Aff37458.667Dipodomys_ordii
ENSVPAG00000004007AFF15282.353ENSETEG00000014905AFF15867.137Echinops_telfairi
ENSVPAG00000004007AFF15351.327ENSETEG00000002756AFF25254.082Echinops_telfairi
ENSVPAG00000004007AFF17637.607ENSEASG00005018361AFF46135.605Equus_asinus_asinus
ENSVPAG00000004007AFF19585.463ENSECAG00000003619AFF110075.142Equus_caballus
ENSVPAG00000004007AFF17637.821ENSECAG00000011969AFF46135.744Equus_caballus
ENSVPAG00000004007AFF17090.000ENSEEUG00000013664-7490.000Erinaceus_europaeus
ENSVPAG00000004007AFF16653.425ENSEEUG00000011214AFF45553.425Erinaceus_europaeus
ENSVPAG00000004007AFF18360.563ENSELUG00000023871aff46560.938Esox_lucius
ENSVPAG00000004007AFF15845.391ENSFALG00000005554AFF110045.521Ficedula_albicollis
ENSVPAG00000004007AFF18037.449ENSFDAG00000005342AFF46034.314Fukomys_damarensis
ENSVPAG00000004007AFF19965.214ENSFDAG00000018846AFF19964.122Fukomys_damarensis
ENSVPAG00000004007AFF18359.722ENSFHEG00000004526aff47559.483Fundulus_heteroclitus
ENSVPAG00000004007AFF17638.429ENSGALG00000030147AFF46235.775Gallus_gallus
ENSVPAG00000004007AFF19157.143ENSGALG00000043935AFF19557.143Gallus_gallus
ENSVPAG00000004007AFF18558.209ENSGACG00000020734aff46558.209Gasterosteus_aculeatus
ENSVPAG00000004007AFF15874.290ENSGGOG00000008497AFF110075.947Gorilla_gorilla
ENSVPAG00000004007AFF18037.945ENSGGOG00000011786AFF49435.201Gorilla_gorilla
ENSVPAG00000004007AFF18034.006ENSHBUG00000021987aff47934.175Haplochromis_burtoni
ENSVPAG00000004007AFF18654.667ENSHGLG00000006661AFF49235.000Heterocephalus_glaber_female
ENSVPAG00000004007AFF19965.025ENSHGLG00000001384AFF19964.585Heterocephalus_glaber_female
ENSVPAG00000004007AFF18037.487ENSHGLG00100018576AFF49235.000Heterocephalus_glaber_male
ENSVPAG00000004007AFF17735.619ENSHCOG00000016280aff47935.342Hippocampus_comes
ENSVPAG00000004007AFF15161.194ENSHCOG00000000539-5361.194Hippocampus_comes
ENSVPAG00000004007AFF17637.740ENSSTOG00000026695AFF46056.164Ictidomys_tridecemlineatus
ENSVPAG00000004007AFF15875.106ENSSTOG00000006530AFF19974.918Ictidomys_tridecemlineatus
ENSVPAG00000004007AFF16748.023ENSSTOG00000012140AFF36960.000Ictidomys_tridecemlineatus
ENSVPAG00000004007AFF15864.681ENSJJAG00000022877Aff15964.681Jaculus_jaculus
ENSVPAG00000004007AFF16559.459ENSJJAG00000013155Aff37460.000Jaculus_jaculus
ENSVPAG00000004007AFF19937.040ENSJJAG00000000912Aff46034.680Jaculus_jaculus
ENSVPAG00000004007AFF17835.677ENSLBEG00000017778aff47835.197Labrus_bergylta
ENSVPAG00000004007AFF19946.688ENSLACG00000007303AFF19946.742Latimeria_chalumnae
ENSVPAG00000004007AFF17737.945ENSLACG00000008849AFF45933.380Latimeria_chalumnae
ENSVPAG00000004007AFF17735.950ENSLOCG00000010610aff45833.109Lepisosteus_oculatus
ENSVPAG00000004007AFF17072.028ENSLOCG00000004025AFF17667.586Lepisosteus_oculatus
ENSVPAG00000004007AFF17638.682ENSLAFG00000010555AFF46035.744Loxodonta_africana
ENSVPAG00000004007AFF16449.351ENSLAFG00000018691AFF28534.899Loxodonta_africana
ENSVPAG00000004007AFF15960.000ENSLAFG00000012884AFF35760.000Loxodonta_africana
ENSVPAG00000004007AFF17447.236ENSMFAG00000034615AFF49239.846Macaca_fascicularis
ENSVPAG00000004007AFF18984.555ENSMFAG00000037700AFF19384.555Macaca_fascicularis
ENSVPAG00000004007AFF18037.984ENSMMUG00000015640AFF49535.017Macaca_mulatta
ENSVPAG00000004007AFF15874.504ENSMMUG00000014076AFF110076.089Macaca_mulatta
ENSVPAG00000004007AFF15474.174ENSMNEG00000031536AFF110076.151Macaca_nemestrina
ENSVPAG00000004007AFF17447.236ENSMNEG00000033381AFF49239.846Macaca_nemestrina
ENSVPAG00000004007AFF17447.236ENSMLEG00000028953AFF49239.846Mandrillus_leucophaeus
ENSVPAG00000004007AFF15874.646ENSMLEG00000039099AFF110076.151Mandrillus_leucophaeus
ENSVPAG00000004007AFF17835.678ENSMAMG00000021453aff47834.995Mastacembelus_armatus
ENSVPAG00000004007AFF18034.006ENSMZEG00005003218aff47934.175Maylandia_zebra
ENSVPAG00000004007AFF19946.623ENSMGAG00000007646AFF19945.122Meleagris_gallopavo
ENSVPAG00000004007AFF15833.105ENSMGAG00000008246-9233.243Meleagris_gallopavo
ENSVPAG00000004007AFF19936.520ENSMGAG00000009144AFF46134.262Meleagris_gallopavo
ENSVPAG00000004007AFF17745.946ENSMAUG00000013669Aff47945.946Mesocricetus_auratus
ENSVPAG00000004007AFF17050.649ENSMICG00000002753-9339.075Microcebus_murinus
ENSVPAG00000004007AFF17637.766ENSMOCG00000003884Aff46034.306Microtus_ochrogaster
ENSVPAG00000004007AFF15861.308ENSMOCG00000017389Aff16061.413Microtus_ochrogaster
ENSVPAG00000004007AFF16956.693ENSMMOG00000013763aff47157.759Mola_mola
ENSVPAG00000004007AFF17938.105ENSMODG00000013842AFF45933.380Monodelphis_domestica
ENSVPAG00000004007AFF19953.496ENSMODG00000020745AFF19751.749Monodelphis_domestica
ENSVPAG00000004007AFF17159.091ENSMALG00000017690aff47159.091Monopterus_albus
ENSVPAG00000004007AFF18037.551MGP_CAROLIEiJ_G0016331Aff46054.795Mus_caroli
ENSVPAG00000004007AFF18037.412ENSMUSG00000049470Aff46054.795Mus_musculus
ENSVPAG00000004007AFF15955.405ENSMUSG00000037138Aff38055.405Mus_musculus
ENSVPAG00000004007AFF17637.712MGP_PahariEiJ_G0017466Aff46054.795Mus_pahari
ENSVPAG00000004007AFF18037.412MGP_SPRETEiJ_G0017175Aff46054.795Mus_spretus
ENSVPAG00000004007AFF19974.817ENSMLUG00000000293AFF110072.209Myotis_lucifugus
ENSVPAG00000004007AFF17637.792ENSMLUG00000015081AFF45935.596Myotis_lucifugus
ENSVPAG00000004007AFF17638.019ENSNGAG00000019867Aff46034.085Nannospalax_galili
ENSVPAG00000004007AFF15873.864ENSNLEG00000009429AFF15973.796Nomascus_leucogenys
ENSVPAG00000004007AFF17055.333ENSNLEG00000012874AFF49239.589Nomascus_leucogenys
ENSVPAG00000004007AFF15450.980ENSMEUG00000003076-5551.131Notamacropus_eugenii
ENSVPAG00000004007AFF110066.939ENSOPRG00000017154-10067.784Ochotona_princeps
ENSVPAG00000004007AFF19367.347ENSODEG00000007407AFF110067.347Octodon_degus
ENSVPAG00000004007AFF18037.169ENSODEG00000008137AFF46034.680Octodon_degus
ENSVPAG00000004007AFF18034.735ENSONIG00000008446aff47834.526Oreochromis_niloticus
ENSVPAG00000004007AFF15855.509ENSOANG00000013624AFF110054.553Ornithorhynchus_anatinus
ENSVPAG00000004007AFF17638.380ENSOCUG00000013635AFF45935.694Oryctolagus_cuniculus
ENSVPAG00000004007AFF17735.010ENSORLG00000001361aff45932.542Oryzias_latipes
ENSVPAG00000004007AFF17735.010ENSORLG00020020601aff45932.542Oryzias_latipes_hni
ENSVPAG00000004007AFF17734.547ENSORLG00015004684aff45932.295Oryzias_latipes_hsok
ENSVPAG00000004007AFF17637.740ENSOGAG00000028482AFF46034.868Otolemur_garnettii
ENSVPAG00000004007AFF15859.238ENSOGAG00000031211-8358.798Otolemur_garnettii
ENSVPAG00000004007AFF17637.527ENSOARG00000013406AFF46035.327Ovis_aries
ENSVPAG00000004007AFF19979.491ENSOARG00000004522AFF15880.113Ovis_aries
ENSVPAG00000004007AFF15874.964ENSPPAG00000029196AFF110076.175Pan_paniscus
ENSVPAG00000004007AFF18037.945ENSPPAG00000043255AFF49835.243Pan_paniscus
ENSVPAG00000004007AFF17782.500ENSPTIG00000011838AFF110076.230Panthera_tigris_altaica
ENSVPAG00000004007AFF17031.965ENSPTIG00000018781AFF39052.703Panthera_tigris_altaica
ENSVPAG00000004007AFF17450.246ENSPTRG00000017228AFF49835.243Pan_troglodytes
ENSVPAG00000004007AFF16584.524ENSPTRG00000016255AFF19984.524Pan_troglodytes
ENSVPAG00000004007AFF17450.246ENSPTRG00000046486-9835.243Pan_troglodytes
ENSVPAG00000004007AFF17447.236ENSPANG00000007039AFF49239.846Papio_anubis
ENSVPAG00000004007AFF15672.847ENSPANG00000016722AFF15872.780Papio_anubis
ENSVPAG00000004007AFF16354.545ENSPKIG00000024325AFF48754.545Paramormyrops_kingsleyae
ENSVPAG00000004007AFF110051.263ENSPSIG00000003759AFF110050.285Pelodiscus_sinensis
ENSVPAG00000004007AFF16833.627ENSPSIG00000010309AFF29431.545Pelodiscus_sinensis
ENSVPAG00000004007AFF19936.319ENSPSIG00000013003AFF45834.801Pelodiscus_sinensis
ENSVPAG00000004007AFF15830.926ENSPMGG00000006477aff49831.005Periophthalmus_magnuspinnatus
ENSVPAG00000004007AFF19477.419ENSPCIG00000011395AFF19977.419Phascolarctos_cinereus
ENSVPAG00000004007AFF17938.129ENSPCIG00000000197AFF45933.287Phascolarctos_cinereus
ENSVPAG00000004007AFF16353.543ENSPLAG00000005101aff27652.893Poecilia_latipinna
ENSVPAG00000004007AFF15148.235ENSPLAG00000012910-5449.306Poecilia_latipinna
ENSVPAG00000004007AFF18037.843ENSPPYG00000015775AFF46035.655Pongo_abelii
ENSVPAG00000004007AFF15591.304ENSPCAG00000005658AFF17491.304Procavia_capensis
ENSVPAG00000004007AFF17638.248ENSPCOG00000023876AFF49034.492Propithecus_coquereli
ENSVPAG00000004007AFF17637.513ENSPVAG00000015204AFF46035.376Pteropus_vampyrus
ENSVPAG00000004007AFF18034.006ENSPNYG00000014804aff47934.175Pundamilia_nyererei
ENSVPAG00000004007AFF18656.164ENSRBIG00000029376AFF46135.794Rhinopithecus_bieti
ENSVPAG00000004007AFF110076.335ENSRBIG00000032242AFF110075.514Rhinopithecus_bieti
ENSVPAG00000004007AFF19185.788ENSRROG00000045716AFF19383.979Rhinopithecus_roxellana
ENSVPAG00000004007AFF18656.164ENSRROG00000033812AFF49135.664Rhinopithecus_roxellana
ENSVPAG00000004007AFF17449.749ENSSBOG00000021562AFF410041.294Saimiri_boliviensis_boliviensis
ENSVPAG00000004007AFF15872.766ENSSBOG00000035401AFF110074.836Saimiri_boliviensis_boliviensis
ENSVPAG00000004007AFF18946.094ENSSHAG00000013198AFF45933.379Sarcophilus_harrisii
ENSVPAG00000004007AFF19954.207ENSSHAG00000004203AFF19952.994Sarcophilus_harrisii
ENSVPAG00000004007AFF15934.464ENSSFOG00015000846AFF49733.506Scleropages_formosus
ENSVPAG00000004007AFF18461.111ENSSMAG00000004734aff48761.111Scophthalmus_maximus
ENSVPAG00000004007AFF17835.444ENSSDUG00000019498aff47835.166Seriola_dumerili
ENSVPAG00000004007AFF17054.110ENSSLDG00000007683aff47058.120Seriola_lalandi_dorsalis
ENSVPAG00000004007AFF15352.493ENSSARG00000013296-7752.802Sorex_araneus
ENSVPAG00000004007AFF17350.543ENSSPUG00000012215AFF49340.952Sphenodon_punctatus
ENSVPAG00000004007AFF19952.640ENSSPUG00000001574AFF19952.227Sphenodon_punctatus
ENSVPAG00000004007AFF16533.292ENSSPAG00000012370aff48833.515Stegastes_partitus
ENSVPAG00000004007AFF15879.574ENSSSCG00000023593AFF16179.433Sus_scrofa
ENSVPAG00000004007AFF18256.164ENSSSCG00000014291AFF46135.391Sus_scrofa
ENSVPAG00000004007AFF19946.179ENSTGUG00000002726AFF110044.915Taeniopygia_guttata
ENSVPAG00000004007AFF18354.795ENSTNIG00000018201aff46654.795Tetraodon_nigroviridis
ENSVPAG00000004007AFF15873.475ENSTBEG00000007536AFF110072.870Tupaia_belangeri
ENSVPAG00000004007AFF19935.603ENSTTRG00000014729AFF45935.408Tursiops_truncatus
ENSVPAG00000004007AFF17638.176ENSUAMG00000025984AFF45935.376Ursus_americanus
ENSVPAG00000004007AFF18778.316ENSUMAG00000025433AFF19075.190Ursus_maritimus
ENSVPAG00000004007AFF15244.340ENSUMAG00000009395AFF25342.268Ursus_maritimus
ENSVPAG00000004007AFF16662.857ENSUMAG00000017952AFF47362.281Ursus_maritimus
ENSVPAG00000004007AFF18256.164ENSVVUG00000024524AFF46135.440Vulpes_vulpes
ENSVPAG00000004007AFF19942.174ENSXETG00000019955aff15941.632Xenopus_tropicalis
ENSVPAG00000004007AFF15831.163ENSXCOG00000006385aff45637.879Xiphophorus_couchianus

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