EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000004214 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 23686 bases
Position: chrGeneScaffold_418:50923-74608
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000003915	ResIII	PF04851.15	3.7e-07	1	1
ENSVPAP00000003915	DEAD	PF00270.29	4.9e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000004213	-	1497	-	ENSVPAP00000003915	498 (aa)	-	UPI00018BCE5A

Gene Model

Click here to download ENSVPAG00000004214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000004214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000004214	-	54	31.022	ENSVPAG00000000142	-	86	31.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000004214	-	57	98.592	ENSG00000088205	DDX18	56	86.331	Homo_sapiens
ENSVPAG00000004214	-	57	90.845	ENSAPLG00000011648	DDX18	54	90.845	Anas_platyrhynchos
ENSVPAG00000004214	-	57	74.296	ENSANAG00000026802	-	51	78.261	Aotus_nancymaae
ENSVPAG00000004214	-	56	77.698	ENSANAG00000034318	-	54	77.698	Aotus_nancymaae
ENSVPAG00000004214	-	57	97.173	ENSANAG00000024417	-	50	97.173	Aotus_nancymaae
ENSVPAG00000004214	-	57	89.789	ENSAMXG00000042612	-	63	89.789	Astyanax_mexicanus
ENSVPAG00000004214	-	56	63.929	WBGene00015232	B0511.6	51	63.929	Caenorhabditis_elegans
ENSVPAG00000004214	-	66	97.535	ENSCAFG00020014114	DDX18	50	97.535	Canis_lupus_dingo
ENSVPAG00000004214	-	66	97.887	ENSCHIG00000019280	DDX18	51	97.887	Capra_hircus
ENSVPAG00000004214	-	66	96.831	ENSCAPG00000004039	DDX18	55	96.831	Cavia_aperea
ENSVPAG00000004214	-	66	96.831	ENSCPOG00000007532	DDX18	50	96.831	Cavia_porcellus
ENSVPAG00000004214	-	56	76.895	ENSCCAG00000018129	-	55	76.895	Cebus_capucinus
ENSVPAG00000004214	-	66	99.296	ENSCCAG00000023595	-	60	99.296	Cebus_capucinus
ENSVPAG00000004214	-	56	79.433	ENSCSAVG00000004895	-	53	79.433	Ciona_savignyi
ENSVPAG00000004214	-	66	86.972	ENSCGRG00001016185	-	54	86.972	Cricetulus_griseus_chok1gshd
ENSVPAG00000004214	-	66	95.775	ENSCGRG00001010803	-	50	95.775	Cricetulus_griseus_chok1gshd
ENSVPAG00000004214	-	66	86.972	ENSCGRG00000013152	-	54	86.972	Cricetulus_griseus_crigri
ENSVPAG00000004214	-	66	95.775	ENSCGRG00000008440	-	52	95.775	Cricetulus_griseus_crigri
ENSVPAG00000004214	-	57	94.737	ENSDNOG00000019096	-	52	94.737	Dasypus_novemcinctus
ENSVPAG00000004214	-	66	95.775	ENSDORG00000011340	Ddx18	53	95.775	Dipodomys_ordii
ENSVPAG00000004214	-	57	88.028	ENSGMOG00000007113	ddx18	53	88.028	Gadus_morhua
ENSVPAG00000004214	-	66	80.435	ENSGGOG00000039210	-	54	80.435	Gorilla_gorilla
ENSVPAG00000004214	-	66	97.535	ENSHGLG00000016324	-	50	97.535	Heterocephalus_glaber_female
ENSVPAG00000004214	-	66	97.535	ENSHGLG00100001563	DDX18	50	97.535	Heterocephalus_glaber_male
ENSVPAG00000004214	-	66	97.887	ENSSTOG00000010541	DDX18	50	97.887	Ictidomys_tridecemlineatus
ENSVPAG00000004214	-	57	87.324	ENSKMAG00000005975	ddx18	91	78.090	Kryptolebias_marmoratus
ENSVPAG00000004214	-	57	96.831	ENSLAFG00000006915	DDX18	50	96.831	Loxodonta_africana
ENSVPAG00000004214	-	66	95.775	ENSMAUG00000015244	Ddx18	50	95.775	Mesocricetus_auratus
ENSVPAG00000004214	-	66	94.366	ENSMICG00000027163	-	57	94.366	Microcebus_murinus
ENSVPAG00000004214	-	66	92.606	ENSMOCG00000013664	-	53	92.606	Microtus_ochrogaster
ENSVPAG00000004214	-	66	90.493	ENSMOCG00000019953	-	50	90.493	Microtus_ochrogaster
ENSVPAG00000004214	-	66	90.141	ENSMOCG00000012842	-	50	91.901	Microtus_ochrogaster
ENSVPAG00000004214	-	66	89.085	ENSMMOG00000019289	ddx18	53	89.085	Mola_mola
ENSVPAG00000004214	-	66	94.366	MGP_CAROLIEiJ_G0014529	Ddx18	50	94.366	Mus_caroli
ENSVPAG00000004214	-	66	95.423	ENSMUSG00000001674	Ddx18	50	95.423	Mus_musculus
ENSVPAG00000004214	-	66	95.423	MGP_PahariEiJ_G0027765	Ddx18	50	95.423	Mus_pahari
ENSVPAG00000004214	-	54	76.015	ENSMPUG00000000414	-	62	76.015	Mustela_putorius_furo
ENSVPAG00000004214	-	66	80.634	ENSNLEG00000027282	-	51	85.714	Nomascus_leucogenys
ENSVPAG00000004214	-	66	98.592	ENSOPRG00000001701	DDX18	50	98.592	Ochotona_princeps
ENSVPAG00000004214	-	66	97.183	ENSODEG00000007330	DDX18	50	97.183	Octodon_degus
ENSVPAG00000004214	-	66	67.391	ENSOCUG00000023972	-	55	63.604	Oryctolagus_cuniculus
ENSVPAG00000004214	-	57	98.592	ENSPPAG00000033473	DDX18	50	98.592	Pan_paniscus
ENSVPAG00000004214	-	66	76.761	ENSPTRG00000047092	-	50	85.714	Pan_troglodytes
ENSVPAG00000004214	-	57	98.944	ENSPTRG00000012391	DDX18	50	98.944	Pan_troglodytes
ENSVPAG00000004214	-	66	95.775	ENSPEMG00000010438	-	50	95.775	Peromyscus_maniculatus_bairdii
ENSVPAG00000004214	-	57	84.722	ENSPMAG00000009147	ddx18	52	84.722	Petromyzon_marinus
ENSVPAG00000004214	-	66	85.664	ENSPLAG00000005210	ddx18	53	85.664	Poecilia_latipinna
ENSVPAG00000004214	-	57	98.944	ENSPPYG00000012796	DDX18	51	98.944	Pongo_abelii
ENSVPAG00000004214	-	54	65.809	YMR290C	-	54	65.809	Saccharomyces_cerevisiae
ENSVPAG00000004214	-	57	89.789	ENSSLDG00000003692	ddx18	50	89.789	Seriola_lalandi_dorsalis
ENSVPAG00000004214	-	66	98.239	ENSSARG00000005248	DDX18	66	98.239	Sorex_araneus
ENSVPAG00000004214	-	66	91.901	ENSTGUG00000011611	DDX18	52	91.901	Taeniopygia_guttata
ENSVPAG00000004214	-	57	90.845	ENSTNIG00000017834	ddx18	51	90.845	Tetraodon_nigroviridis
ENSVPAG00000004214	-	66	97.887	ENSUAMG00000016457	DDX18	54	97.887	Ursus_americanus
ENSVPAG00000004214	-	66	76.596	ENSXCOG00000015361	ddx18	96	77.540	Xiphophorus_couchianus