EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000004569 (Gene tree)
Gene ID: -
Gene Symbol: HTATSF1
Alias: TAT-SF1
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 14790 bases
Position: chrGeneScaffold_2675:470282-485071
Accession: 5276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000004241	RRM_1	PF00076.22	5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000004569	HTATSF1-201	2076	-	ENSVPAP00000004241	691 (aa)	-	UPI00018BDDC8

Gene Model

Click here to download ENSVPAG00000004569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000004569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000004569	HTATSF1	99	76.812	ENSG00000102241	HTATSF1	92	77.331	Homo_sapiens
ENSVPAG00000004569	HTATSF1	51	53.846	ENSAPOG00000009823	htatsf1	80	55.890	Acanthochromis_polyacanthus
ENSVPAG00000004569	HTATSF1	99	76.728	ENSAMEG00000002921	HTATSF1	91	76.869	Ailuropoda_melanoleuca
ENSVPAG00000004569	HTATSF1	99	68.505	ENSANAG00000027986	-	91	68.613	Aotus_nancymaae
ENSVPAG00000004569	HTATSF1	99	72.583	ENSANAG00000025458	-	97	72.714	Aotus_nancymaae
ENSVPAG00000004569	HTATSF1	99	81.215	ENSBTAG00000054942	HTATSF1	91	81.215	Bos_taurus
ENSVPAG00000004569	HTATSF1	99	75.287	ENSBTAG00000032711	HTATSF1	90	76.266	Bos_taurus
ENSVPAG00000004569	HTATSF1	99	81.215	ENSBTAG00000055212	HTATSF1	91	81.215	Bos_taurus
ENSVPAG00000004569	HTATSF1	99	75.827	ENSCJAG00000003676	HTATSF1	91	75.977	Callithrix_jacchus
ENSVPAG00000004569	HTATSF1	99	76.301	ENSCAFG00000023294	HTATSF1	91	76.590	Canis_familiaris
ENSVPAG00000004569	HTATSF1	99	75.211	ENSCAFG00020024635	HTATSF1	91	75.493	Canis_lupus_dingo
ENSVPAG00000004569	HTATSF1	99	81.073	ENSCHIG00000000312	HTATSF1	91	81.073	Capra_hircus
ENSVPAG00000004569	HTATSF1	99	74.385	ENSTSYG00000028876	HTATSF1	91	74.819	Carlito_syrichta
ENSVPAG00000004569	HTATSF1	99	71.140	ENSCCAG00000025329	-	91	70.435	Cebus_capucinus
ENSVPAG00000004569	HTATSF1	99	75.793	ENSCCAG00000022701	-	91	75.942	Cebus_capucinus
ENSVPAG00000004569	HTATSF1	99	76.744	ENSCATG00000029963	HTATSF1	91	77.101	Cercocebus_atys
ENSVPAG00000004569	HTATSF1	100	67.932	ENSCLAG00000002718	HTATSF1	91	68.777	Chinchilla_lanigera
ENSVPAG00000004569	HTATSF1	99	76.890	ENSCSAG00000007505	HTATSF1	91	77.246	Chlorocebus_sabaeus
ENSVPAG00000004569	HTATSF1	99	76.744	ENSCANG00000028495	HTATSF1	91	77.101	Colobus_angolensis_palliatus
ENSVPAG00000004569	HTATSF1	99	67.680	ENSCGRG00001021602	Htatsf1	91	67.639	Cricetulus_griseus_chok1gshd
ENSVPAG00000004569	HTATSF1	99	62.293	ENSCGRG00000002085	Htatsf1	99	62.083	Cricetulus_griseus_crigri
ENSVPAG00000004569	HTATSF1	99	72.675	ENSDNOG00000002254	HTATSF1	92	72.521	Dasypus_novemcinctus
ENSVPAG00000004569	HTATSF1	87	42.193	ENSETEG00000006377	-	57	47.045	Echinops_telfairi
ENSVPAG00000004569	HTATSF1	99	77.260	ENSEASG00005003440	HTATSF1	91	77.401	Equus_asinus_asinus
ENSVPAG00000004569	HTATSF1	99	77.260	ENSECAG00000009156	HTATSF1	91	77.401	Equus_caballus
ENSVPAG00000004569	HTATSF1	99	62.947	ENSEEUG00000010668	HTATSF1	91	63.662	Erinaceus_europaeus
ENSVPAG00000004569	HTATSF1	100	76.681	ENSFCAG00000031924	HTATSF1	91	76.700	Felis_catus
ENSVPAG00000004569	HTATSF1	99	65.612	ENSFDAG00000008617	HTATSF1	91	66.571	Fukomys_damarensis
ENSVPAG00000004569	HTATSF1	50	52.342	ENSGACG00000020459	htatsf1	82	53.846	Gasterosteus_aculeatus
ENSVPAG00000004569	HTATSF1	99	76.812	ENSGGOG00000026072	HTATSF1	92	77.331	Gorilla_gorilla
ENSVPAG00000004569	HTATSF1	98	66.763	ENSHGLG00000005328	HTATSF1	91	66.524	Heterocephalus_glaber_female
ENSVPAG00000004569	HTATSF1	99	72.818	ENSSTOG00000012505	HTATSF1	90	72.389	Ictidomys_tridecemlineatus
ENSVPAG00000004569	HTATSF1	99	64.483	ENSLAFG00000014307	HTATSF1	90	64.338	Loxodonta_africana
ENSVPAG00000004569	HTATSF1	99	76.599	ENSMFAG00000044705	HTATSF1	91	76.957	Macaca_fascicularis
ENSVPAG00000004569	HTATSF1	99	76.599	ENSMMUG00000006450	HTATSF1	91	76.957	Macaca_mulatta
ENSVPAG00000004569	HTATSF1	99	71.345	ENSMNEG00000024084	HTATSF1	91	72.439	Macaca_nemestrina
ENSVPAG00000004569	HTATSF1	99	76.599	ENSMLEG00000035511	HTATSF1	91	76.957	Mandrillus_leucophaeus
ENSVPAG00000004569	HTATSF1	99	67.705	ENSMAUG00000007235	Htatsf1	91	66.667	Mesocricetus_auratus
ENSVPAG00000004569	HTATSF1	99	73.418	ENSMICG00000009348	HTATSF1	91	75.109	Microcebus_murinus
ENSVPAG00000004569	HTATSF1	99	65.508	ENSMOCG00000023007	-	91	66.243	Microtus_ochrogaster
ENSVPAG00000004569	HTATSF1	99	64.892	ENSMOCG00000022370	-	87	64.040	Microtus_ochrogaster
ENSVPAG00000004569	HTATSF1	51	52.105	ENSMALG00000019977	htatsf1	84	53.543	Monopterus_albus
ENSVPAG00000004569	HTATSF1	99	64.773	MGP_CAROLIEiJ_G0033094	Htatsf1	90	65.186	Mus_caroli
ENSVPAG00000004569	HTATSF1	98	65.123	ENSMUSG00000067873	Htatsf1	91	65.665	Mus_musculus
ENSVPAG00000004569	HTATSF1	98	64.978	MGP_SPRETEiJ_G0034249	Htatsf1	91	65.522	Mus_spretus
ENSVPAG00000004569	HTATSF1	100	75.698	ENSMPUG00000001901	HTATSF1	91	75.740	Mustela_putorius_furo
ENSVPAG00000004569	HTATSF1	99	66.520	ENSMLUG00000009234	-	90	68.950	Myotis_lucifugus
ENSVPAG00000004569	HTATSF1	99	71.064	ENSMLUG00000028418	-	91	71.348	Myotis_lucifugus
ENSVPAG00000004569	HTATSF1	98	69.546	ENSNGAG00000017831	Htatsf1	90	69.175	Nannospalax_galili
ENSVPAG00000004569	HTATSF1	99	76.667	ENSNLEG00000002746	HTATSF1	91	76.957	Nomascus_leucogenys
ENSVPAG00000004569	HTATSF1	52	60.598	ENSOANG00000011674	-	89	60.598	Ornithorhynchus_anatinus
ENSVPAG00000004569	HTATSF1	99	70.899	ENSOCUG00000012570	HTATSF1	91	71.552	Oryctolagus_cuniculus
ENSVPAG00000004569	HTATSF1	98	71.574	ENSOGAG00000005565	HTATSF1	92	72.183	Otolemur_garnettii
ENSVPAG00000004569	HTATSF1	99	81.215	ENSOARG00000011215	-	91	81.215	Ovis_aries
ENSVPAG00000004569	HTATSF1	99	75.490	ENSOARG00000000481	-	91	73.706	Ovis_aries
ENSVPAG00000004569	HTATSF1	99	76.957	ENSPPAG00000024268	HTATSF1	92	77.475	Pan_paniscus
ENSVPAG00000004569	HTATSF1	100	76.967	ENSPPRG00000014209	HTATSF1	91	76.990	Panthera_pardus
ENSVPAG00000004569	HTATSF1	100	76.967	ENSPTIG00000016887	HTATSF1	94	76.990	Panthera_tigris_altaica
ENSVPAG00000004569	HTATSF1	99	76.957	ENSPTRG00000044591	HTATSF1	92	77.475	Pan_troglodytes
ENSVPAG00000004569	HTATSF1	84	75.897	ENSPANG00000010946	HTATSF1	83	76.320	Papio_anubis
ENSVPAG00000004569	HTATSF1	98	68.633	ENSPEMG00000022397	Htatsf1	91	68.848	Peromyscus_maniculatus_bairdii
ENSVPAG00000004569	HTATSF1	86	75.671	ENSPPYG00000020765	HTATSF1	76	77.509	Pongo_abelii
ENSVPAG00000004569	HTATSF1	97	62.018	ENSPCAG00000010576	HTATSF1	90	61.370	Procavia_capensis
ENSVPAG00000004569	HTATSF1	99	76.369	ENSPCOG00000021823	HTATSF1	91	76.522	Propithecus_coquereli
ENSVPAG00000004569	HTATSF1	99	70.845	ENSPVAG00000010281	HTATSF1	90	70.845	Pteropus_vampyrus
ENSVPAG00000004569	HTATSF1	99	65.972	ENSRNOG00000027761	Htatsf1	91	66.246	Rattus_norvegicus
ENSVPAG00000004569	HTATSF1	99	65.843	ENSRBIG00000035486	HTATSF1	90	65.942	Rhinopithecus_bieti
ENSVPAG00000004569	HTATSF1	99	76.163	ENSRROG00000021939	HTATSF1	91	76.522	Rhinopithecus_roxellana
ENSVPAG00000004569	HTATSF1	99	72.832	ENSSBOG00000017914	-	92	73.149	Saimiri_boliviensis_boliviensis
ENSVPAG00000004569	HTATSF1	99	74.709	ENSSBOG00000027186	-	91	75.217	Saimiri_boliviensis_boliviensis
ENSVPAG00000004569	HTATSF1	99	61.087	ENSSARG00000005193	HTATSF1	90	60.933	Sorex_araneus
ENSVPAG00000004569	HTATSF1	99	72.374	ENSSSCG00000023062	HTATSF1	90	72.518	Sus_scrofa
ENSVPAG00000004569	HTATSF1	87	71.119	ENSTTRG00000002269	HTATSF1	85	71.993	Tursiops_truncatus
ENSVPAG00000004569	HTATSF1	100	77.825	ENSUAMG00000012048	HTATSF1	92	77.969	Ursus_americanus
ENSVPAG00000004569	HTATSF1	100	76.816	ENSUMAG00000010393	HTATSF1	92	76.955	Ursus_maritimus
ENSVPAG00000004569	HTATSF1	99	74.930	ENSVVUG00000024802	HTATSF1	91	75.211	Vulpes_vulpes