EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000004709 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 27707 bases
Position: chrGeneScaffold_2323:5489-33195
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000004367	KH_1	PF00013.29	6.8e-70	1	4
ENSVPAP00000004367	KH_1	PF00013.29	6.8e-70	2	4
ENSVPAP00000004367	KH_1	PF00013.29	6.8e-70	3	4
ENSVPAP00000004367	KH_1	PF00013.29	6.8e-70	4	4
ENSVPAP00000004367	KH_2	PF07650.17	7.3e-23	1	2
ENSVPAP00000004367	KH_2	PF07650.17	7.3e-23	2	2
ENSVPAP00000004367	DUF1897	PF09005.10	3.3e-12	1	2
ENSVPAP00000004367	DUF1897	PF09005.10	3.3e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000004709	FUBP1-201	1950	-	ENSVPAP00000004367	650 (aa)	-	UPI00018BCBBA

Gene Model

Click here to download ENSVPAG00000004709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000004709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000004709	FUBP1	50	36.364	ENSVPAG00000007807	NOVA1	51	36.364
ENSVPAG00000004709	FUBP1	63	63.115	ENSVPAG00000010837	-	100	62.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000004709	FUBP1	100	99.692	ENSG00000162613	FUBP1	99	99.692	Homo_sapiens
ENSVPAG00000004709	FUBP1	99	70.462	ENSAPOG00000014845	fubp1	70	75.652	Acanthochromis_polyacanthus
ENSVPAG00000004709	FUBP1	99	96.396	ENSAMEG00000007372	FUBP1	99	96.396	Ailuropoda_melanoleuca
ENSVPAG00000004709	FUBP1	99	69.278	ENSACIG00000020024	fubp1	69	73.904	Amphilophus_citrinellus
ENSVPAG00000004709	FUBP1	99	68.105	ENSAPEG00000012232	fubp1	72	77.074	Amphiprion_percula
ENSVPAG00000004709	FUBP1	99	72.360	ENSATEG00000018619	fubp1	70	77.753	Anabas_testudineus
ENSVPAG00000004709	FUBP1	93	97.347	ENSAPLG00000005965	FUBP1	100	97.347	Anas_platyrhynchos
ENSVPAG00000004709	FUBP1	99	85.860	ENSACAG00000006310	FUBP1	96	87.135	Anolis_carolinensis
ENSVPAG00000004709	FUBP1	99	71.166	ENSACLG00000006708	fubp1	72	77.974	Astatotilapia_calliptera
ENSVPAG00000004709	FUBP1	87	77.612	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSVPAG00000004709	FUBP1	100	99.538	ENSCJAG00000007062	FUBP1	99	99.689	Callithrix_jacchus
ENSVPAG00000004709	FUBP1	99	99.844	ENSCAFG00000020361	FUBP1	99	99.844	Canis_familiaris
ENSVPAG00000004709	FUBP1	94	99.180	ENSTSYG00000000148	FUBP1	99	99.180	Carlito_syrichta
ENSVPAG00000004709	FUBP1	57	98.535	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSVPAG00000004709	FUBP1	100	98.622	ENSCPOG00000002757	FUBP1	99	98.622	Cavia_porcellus
ENSVPAG00000004709	FUBP1	100	84.682	ENSCCAG00000036537	FUBP1	99	84.971	Cebus_capucinus
ENSVPAG00000004709	FUBP1	100	99.692	ENSCATG00000042126	FUBP1	99	99.692	Cercocebus_atys
ENSVPAG00000004709	FUBP1	100	99.385	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSVPAG00000004709	FUBP1	99	99.689	ENSCSAG00000001402	FUBP1	99	99.689	Chlorocebus_sabaeus
ENSVPAG00000004709	FUBP1	100	99.231	ENSCHOG00000008177	FUBP1	99	99.231	Choloepus_hoffmanni
ENSVPAG00000004709	FUBP1	100	98.162	ENSCGRG00001007103	Fubp1	99	98.162	Cricetulus_griseus_chok1gshd
ENSVPAG00000004709	FUBP1	94	98.858	ENSCGRG00000003372	Fubp1	100	98.658	Cricetulus_griseus_crigri
ENSVPAG00000004709	FUBP1	99	70.615	ENSCSEG00000021412	fubp1	70	76.316	Cynoglossus_semilaevis
ENSVPAG00000004709	FUBP1	99	68.935	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSVPAG00000004709	FUBP1	99	69.565	ENSDARG00000029248	fubp1	70	76.774	Danio_rerio
ENSVPAG00000004709	FUBP1	82	56.213	ENSDNOG00000034565	-	83	74.699	Dasypus_novemcinctus
ENSVPAG00000004709	FUBP1	100	99.692	ENSDORG00000016534	Fubp1	99	99.692	Dipodomys_ordii
ENSVPAG00000004709	FUBP1	77	97.983	ENSETEG00000000948	-	61	97.983	Echinops_telfairi
ENSVPAG00000004709	FUBP1	82	47.197	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSVPAG00000004709	FUBP1	100	85.846	ENSEEUG00000001287	FUBP1	99	85.846	Erinaceus_europaeus
ENSVPAG00000004709	FUBP1	99	68.485	ENSELUG00000007990	fubp1	70	74.298	Esox_lucius
ENSVPAG00000004709	FUBP1	99	95.969	ENSFALG00000005768	FUBP1	98	95.969	Ficedula_albicollis
ENSVPAG00000004709	FUBP1	100	99.077	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSVPAG00000004709	FUBP1	99	71.189	ENSFHEG00000005230	fubp1	74	83.036	Fundulus_heteroclitus
ENSVPAG00000004709	FUBP1	99	66.308	ENSGMOG00000003370	fubp1	70	69.956	Gadus_morhua
ENSVPAG00000004709	FUBP1	99	96.589	ENSGALG00000008939	FUBP1	99	96.589	Gallus_gallus
ENSVPAG00000004709	FUBP1	99	69.865	ENSGAFG00000020972	fubp1	91	77.778	Gambusia_affinis
ENSVPAG00000004709	FUBP1	99	70.138	ENSGACG00000016563	fubp1	70	75.877	Gasterosteus_aculeatus
ENSVPAG00000004709	FUBP1	99	70.030	ENSHBUG00000009835	fubp1	85	76.923	Haplochromis_burtoni
ENSVPAG00000004709	FUBP1	100	98.775	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSVPAG00000004709	FUBP1	99	83.283	ENSHGLG00000002808	-	72	91.228	Heterocephalus_glaber_female
ENSVPAG00000004709	FUBP1	100	98.775	ENSHGLG00100003417	-	99	98.775	Heterocephalus_glaber_male
ENSVPAG00000004709	FUBP1	99	83.891	ENSHGLG00100001414	-	72	91.886	Heterocephalus_glaber_male
ENSVPAG00000004709	FUBP1	99	68.358	ENSHCOG00000000910	fubp1	70	74.735	Hippocampus_comes
ENSVPAG00000004709	FUBP1	99	74.125	ENSIPUG00000009896	fubp1	70	76.840	Ictalurus_punctatus
ENSVPAG00000004709	FUBP1	100	99.387	ENSSTOG00000014312	FUBP1	99	99.844	Ictidomys_tridecemlineatus
ENSVPAG00000004709	FUBP1	99	98.142	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSVPAG00000004709	FUBP1	99	70.353	ENSKMAG00000018897	fubp1	69	76.432	Kryptolebias_marmoratus
ENSVPAG00000004709	FUBP1	99	67.166	ENSLBEG00000012700	fubp1	72	74.790	Labrus_bergylta
ENSVPAG00000004709	FUBP1	97	71.196	ENSLOCG00000003745	fubp1	92	74.180	Lepisosteus_oculatus
ENSVPAG00000004709	FUBP1	100	96.125	ENSLAFG00000003273	FUBP1	99	98.014	Loxodonta_africana
ENSVPAG00000004709	FUBP1	100	99.692	ENSMFAG00000031825	FUBP1	99	99.692	Macaca_fascicularis
ENSVPAG00000004709	FUBP1	100	99.692	ENSMMUG00000002899	FUBP1	99	99.692	Macaca_mulatta
ENSVPAG00000004709	FUBP1	100	99.692	ENSMNEG00000045212	FUBP1	99	99.692	Macaca_nemestrina
ENSVPAG00000004709	FUBP1	99	71.385	ENSMZEG00005024298	fubp1	70	78.384	Maylandia_zebra
ENSVPAG00000004709	FUBP1	93	96.860	ENSMGAG00000009424	FUBP1	99	96.860	Meleagris_gallopavo
ENSVPAG00000004709	FUBP1	100	98.775	ENSMAUG00000016428	Fubp1	100	97.987	Mesocricetus_auratus
ENSVPAG00000004709	FUBP1	100	98.622	ENSMOCG00000014751	Fubp1	98	100.000	Microtus_ochrogaster
ENSVPAG00000004709	FUBP1	88	73.818	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSVPAG00000004709	FUBP1	95	91.038	ENSMODG00000020804	FUBP1	100	91.038	Monodelphis_domestica
ENSVPAG00000004709	FUBP1	99	70.489	ENSMALG00000015173	fubp1	70	76.856	Monopterus_albus
ENSVPAG00000004709	FUBP1	100	98.308	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.658	Mus_caroli
ENSVPAG00000004709	FUBP1	100	98.000	ENSMUSG00000028034	Fubp1	100	97.987	Mus_musculus
ENSVPAG00000004709	FUBP1	100	98.769	MGP_PahariEiJ_G0027191	Fubp1	100	98.658	Mus_pahari
ENSVPAG00000004709	FUBP1	100	98.154	MGP_SPRETEiJ_G0026693	Fubp1	100	98.658	Mus_spretus
ENSVPAG00000004709	FUBP1	99	95.217	ENSMLUG00000014802	FUBP1	99	95.217	Myotis_lucifugus
ENSVPAG00000004709	FUBP1	100	94.793	ENSNGAG00000014302	Fubp1	100	98.658	Nannospalax_galili
ENSVPAG00000004709	FUBP1	99	69.302	ENSNBRG00000015099	fubp1	72	77.974	Neolamprologus_brichardi
ENSVPAG00000004709	FUBP1	100	95.706	ENSNLEG00000009772	FUBP1	99	95.706	Nomascus_leucogenys
ENSVPAG00000004709	FUBP1	90	100.000	ENSMEUG00000007917	-	78	100.000	Notamacropus_eugenii
ENSVPAG00000004709	FUBP1	91	98.582	ENSOPRG00000001175	FUBP1	90	98.582	Ochotona_princeps
ENSVPAG00000004709	FUBP1	99	66.978	ENSODEG00000003657	-	99	66.199	Octodon_degus
ENSVPAG00000004709	FUBP1	100	99.231	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSVPAG00000004709	FUBP1	99	69.985	ENSONIG00000018381	fubp1	69	78.384	Oreochromis_niloticus
ENSVPAG00000004709	FUBP1	88	92.727	ENSOANG00000009777	FUBP1	99	92.562	Ornithorhynchus_anatinus
ENSVPAG00000004709	FUBP1	99	68.896	ENSORLG00000003540	fubp1	71	77.753	Oryzias_latipes
ENSVPAG00000004709	FUBP1	99	68.833	ENSORLG00020005908	fubp1	70	77.093	Oryzias_latipes_hni
ENSVPAG00000004709	FUBP1	99	70.607	ENSORLG00015008779	fubp1	70	77.093	Oryzias_latipes_hsok
ENSVPAG00000004709	FUBP1	99	70.342	ENSOMEG00000021943	fubp1	70	76.211	Oryzias_melastigma
ENSVPAG00000004709	FUBP1	99	95.821	ENSOGAG00000014233	FUBP1	99	95.821	Otolemur_garnettii
ENSVPAG00000004709	FUBP1	99	96.833	ENSOARG00000013259	FUBP1	99	96.682	Ovis_aries
ENSVPAG00000004709	FUBP1	100	99.846	ENSPPRG00000000413	FUBP1	99	99.846	Panthera_pardus
ENSVPAG00000004709	FUBP1	100	99.846	ENSPTIG00000019450	FUBP1	99	99.846	Panthera_tigris_altaica
ENSVPAG00000004709	FUBP1	94	96.072	ENSPSIG00000012965	FUBP1	99	96.791	Pelodiscus_sinensis
ENSVPAG00000004709	FUBP1	99	71.406	ENSPMGG00000009060	fubp1	71	76.739	Periophthalmus_magnuspinnatus
ENSVPAG00000004709	FUBP1	100	97.856	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSVPAG00000004709	FUBP1	57	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSVPAG00000004709	FUBP1	99	68.000	ENSPLAG00000021170	fubp1	72	78.384	Poecilia_latipinna
ENSVPAG00000004709	FUBP1	99	72.558	ENSPMEG00000004747	fubp1	73	78.384	Poecilia_mexicana
ENSVPAG00000004709	FUBP1	99	71.298	ENSPREG00000017911	fubp1	70	78.384	Poecilia_reticulata
ENSVPAG00000004709	FUBP1	71	99.567	ENSPPYG00000001219	-	70	99.567	Pongo_abelii
ENSVPAG00000004709	FUBP1	100	98.923	ENSPCAG00000012617	FUBP1	99	98.923	Procavia_capensis
ENSVPAG00000004709	FUBP1	100	99.846	ENSPCOG00000024974	FUBP1	99	99.846	Propithecus_coquereli
ENSVPAG00000004709	FUBP1	100	95.385	ENSPVAG00000014637	FUBP1	99	95.385	Pteropus_vampyrus
ENSVPAG00000004709	FUBP1	99	71.210	ENSPNYG00000004552	fubp1	73	78.414	Pundamilia_nyererei
ENSVPAG00000004709	FUBP1	99	71.471	ENSPNAG00000016207	fubp1	87	77.223	Pygocentrus_nattereri
ENSVPAG00000004709	FUBP1	99	98.142	ENSRNOG00000043370	Fubp1	99	98.142	Rattus_norvegicus
ENSVPAG00000004709	FUBP1	99	99.689	ENSRBIG00000042950	FUBP1	99	99.689	Rhinopithecus_bieti
ENSVPAG00000004709	FUBP1	99	99.689	ENSRROG00000043534	FUBP1	99	99.689	Rhinopithecus_roxellana
ENSVPAG00000004709	FUBP1	100	99.692	ENSSBOG00000027299	FUBP1	99	99.844	Saimiri_boliviensis_boliviensis
ENSVPAG00000004709	FUBP1	94	97.883	ENSSHAG00000005367	FUBP1	99	98.732	Sarcophilus_harrisii
ENSVPAG00000004709	FUBP1	98	74.062	ENSSFOG00015010213	fubp1	70	79.167	Scleropages_formosus
ENSVPAG00000004709	FUBP1	99	69.774	ENSSDUG00000007383	fubp1	68	76.333	Seriola_dumerili
ENSVPAG00000004709	FUBP1	99	69.820	ENSSLDG00000022863	fubp1	72	76.754	Seriola_lalandi_dorsalis
ENSVPAG00000004709	FUBP1	71	100.000	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSVPAG00000004709	FUBP1	99	88.253	ENSSPUG00000008389	FUBP1	99	86.091	Sphenodon_punctatus
ENSVPAG00000004709	FUBP1	99	72.136	ENSSPAG00000010161	fubp1	69	77.753	Stegastes_partitus
ENSVPAG00000004709	FUBP1	93	96.223	ENSTGUG00000006841	FUBP1	100	96.223	Taeniopygia_guttata
ENSVPAG00000004709	FUBP1	92	72.139	ENSTRUG00000004615	fubp1	65	77.729	Takifugu_rubripes
ENSVPAG00000004709	FUBP1	50	84.459	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSVPAG00000004709	FUBP1	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSVPAG00000004709	FUBP1	100	100.000	ENSTTRG00000000096	FUBP1	99	100.000	Tursiops_truncatus
ENSVPAG00000004709	FUBP1	99	68.615	ENSXCOG00000019354	fubp1	72	76.856	Xiphophorus_couchianus
ENSVPAG00000004709	FUBP1	96	71.677	ENSXMAG00000007168	fubp1	73	78.166	Xiphophorus_maculatus