EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000004880 (Gene tree)
Gene ID: -
Gene Symbol: SHQ1
Alias: FLJ10539|Shq1p
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 99193 bases
Position: chrGeneScaffold_1839:218639-317831
Accession: 25543
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000004520	SHQ1	PF04925.15	1.2e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000004880	SHQ1-201	1599	-	ENSVPAP00000004520	532 (aa)	-	UPI00018BEBC6

Gene Model

Click here to download ENSVPAG00000004880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000004880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000004880	SHQ1	100	73.596	ENSG00000144736	SHQ1	96	72.097	Homo_sapiens
ENSVPAG00000004880	SHQ1	60	60.312	ENSAPOG00000000397	shq1	73	50.110	Acanthochromis_polyacanthus
ENSVPAG00000004880	SHQ1	100	73.308	ENSAMEG00000015140	SHQ1	92	72.932	Ailuropoda_melanoleuca
ENSVPAG00000004880	SHQ1	59	61.709	ENSACIG00000021249	shq1	73	51.304	Amphilophus_citrinellus
ENSVPAG00000004880	SHQ1	60	62.187	ENSAOCG00000023311	shq1	73	51.082	Amphiprion_ocellaris
ENSVPAG00000004880	SHQ1	60	61.250	ENSAPEG00000021686	shq1	73	49.455	Amphiprion_percula
ENSVPAG00000004880	SHQ1	75	53.015	ENSATEG00000008475	shq1	67	51.288	Anabas_testudineus
ENSVPAG00000004880	SHQ1	86	56.863	ENSAPLG00000013926	SHQ1	90	56.427	Anas_platyrhynchos
ENSVPAG00000004880	SHQ1	82	62.014	ENSACAG00000014809	SHQ1	65	62.014	Anolis_carolinensis
ENSVPAG00000004880	SHQ1	100	73.308	ENSANAG00000029241	SHQ1	92	72.180	Aotus_nancymaae
ENSVPAG00000004880	SHQ1	100	57.116	ENSANAG00000030500	-	78	60.486	Aotus_nancymaae
ENSVPAG00000004880	SHQ1	59	60.635	ENSACLG00000023077	shq1	71	46.753	Astatotilapia_calliptera
ENSVPAG00000004880	SHQ1	100	75.940	ENSBTAG00000005436	SHQ1	92	75.564	Bos_taurus
ENSVPAG00000004880	SHQ1	56	34.951	WBGene00021655	Y48A5A.1	53	35.484	Caenorhabditis_elegans
ENSVPAG00000004880	SHQ1	100	70.599	ENSCJAG00000015131	SHQ1	92	71.536	Callithrix_jacchus
ENSVPAG00000004880	SHQ1	84	79.195	ENSCAFG00000006434	SHQ1	91	72.368	Canis_familiaris
ENSVPAG00000004880	SHQ1	84	78.971	ENSCAFG00020016743	SHQ1	96	72.180	Canis_lupus_dingo
ENSVPAG00000004880	SHQ1	100	76.504	ENSCHIG00000012271	SHQ1	83	76.128	Capra_hircus
ENSVPAG00000004880	SHQ1	98	66.412	ENSTSYG00000014439	SHQ1	98	66.031	Carlito_syrichta
ENSVPAG00000004880	SHQ1	99	59.810	ENSCAPG00000009343	SHQ1	96	63.871	Cavia_aperea
ENSVPAG00000004880	SHQ1	84	70.996	ENSCPOG00000011443	SHQ1	91	65.804	Cavia_porcellus
ENSVPAG00000004880	SHQ1	88	78.465	ENSCCAG00000027080	SHQ1	84	79.195	Cebus_capucinus
ENSVPAG00000004880	SHQ1	99	58.801	ENSCCAG00000036087	-	78	63.920	Cebus_capucinus
ENSVPAG00000004880	SHQ1	100	71.910	ENSCATG00000041238	SHQ1	96	72.472	Cercocebus_atys
ENSVPAG00000004880	SHQ1	98	67.857	ENSCLAG00000004206	SHQ1	90	67.985	Chinchilla_lanigera
ENSVPAG00000004880	SHQ1	88	76.433	ENSCSAG00000011514	SHQ1	92	79.287	Chlorocebus_sabaeus
ENSVPAG00000004880	SHQ1	80	65.412	ENSCPBG00000006441	SHQ1	70	64.896	Chrysemys_picta_bellii
ENSVPAG00000004880	SHQ1	99	73.157	ENSCANG00000039295	SHQ1	92	71.645	Colobus_angolensis_palliatus
ENSVPAG00000004880	SHQ1	100	64.419	ENSCGRG00001012583	Shq1	92	63.670	Cricetulus_griseus_chok1gshd
ENSVPAG00000004880	SHQ1	100	64.419	ENSCGRG00000009849	Shq1	92	63.670	Cricetulus_griseus_crigri
ENSVPAG00000004880	SHQ1	70	52.432	ENSCSEG00000007829	shq1	71	50.773	Cynoglossus_semilaevis
ENSVPAG00000004880	SHQ1	73	52.699	ENSCVAG00000020049	shq1	87	44.762	Cyprinodon_variegatus
ENSVPAG00000004880	SHQ1	100	71.670	ENSDNOG00000033937	SHQ1	92	71.107	Dasypus_novemcinctus
ENSVPAG00000004880	SHQ1	99	57.974	ENSETEG00000005766	SHQ1	91	57.223	Echinops_telfairi
ENSVPAG00000004880	SHQ1	66	47.578	ENSEBUG00000005445	shq1	56	51.587	Eptatretus_burgeri
ENSVPAG00000004880	SHQ1	100	74.060	ENSEASG00005002237	SHQ1	92	73.684	Equus_asinus_asinus
ENSVPAG00000004880	SHQ1	99	73.546	ENSECAG00000015673	SHQ1	89	73.171	Equus_caballus
ENSVPAG00000004880	SHQ1	100	71.241	ENSEEUG00000010568	SHQ1	92	70.865	Erinaceus_europaeus
ENSVPAG00000004880	SHQ1	69	51.771	ENSELUG00000003476	shq1	83	45.161	Esox_lucius
ENSVPAG00000004880	SHQ1	100	71.617	ENSFCAG00000012781	SHQ1	92	70.489	Felis_catus
ENSVPAG00000004880	SHQ1	97	57.143	ENSFALG00000013428	SHQ1	71	62.587	Ficedula_albicollis
ENSVPAG00000004880	SHQ1	99	64.791	ENSFDAG00000005595	SHQ1	84	63.818	Fukomys_damarensis
ENSVPAG00000004880	SHQ1	73	54.359	ENSFHEG00000017552	shq1	74	49.779	Fundulus_heteroclitus
ENSVPAG00000004880	SHQ1	66	49.284	ENSGMOG00000007350	shq1	88	49.284	Gadus_morhua
ENSVPAG00000004880	SHQ1	98	55.408	ENSGALG00000007798	SHQ1	72	60.502	Gallus_gallus
ENSVPAG00000004880	SHQ1	66	51.289	ENSGACG00000011797	shq1	66	59.848	Gasterosteus_aculeatus
ENSVPAG00000004880	SHQ1	100	73.408	ENSGGOG00000034818	SHQ1	96	71.910	Gorilla_gorilla
ENSVPAG00000004880	SHQ1	59	60.635	ENSHBUG00000010857	shq1	69	50.346	Haplochromis_burtoni
ENSVPAG00000004880	SHQ1	99	67.031	ENSHGLG00000003637	SHQ1	83	65.082	Heterocephalus_glaber_female
ENSVPAG00000004880	SHQ1	99	67.276	ENSHGLG00100011957	SHQ1	83	65.385	Heterocephalus_glaber_male
ENSVPAG00000004880	SHQ1	94	44.841	ENSHCOG00000010799	shq1	67	48.694	Hippocampus_comes
ENSVPAG00000004880	SHQ1	73	49.231	ENSIPUG00000001247	shq1	68	44.743	Ictalurus_punctatus
ENSVPAG00000004880	SHQ1	97	63.689	ENSSTOG00000010043	SHQ1	75	68.445	Ictidomys_tridecemlineatus
ENSVPAG00000004880	SHQ1	100	64.662	ENSJJAG00000017611	Shq1	92	63.534	Jaculus_jaculus
ENSVPAG00000004880	SHQ1	80	50.572	ENSKMAG00000004457	shq1	72	50.441	Kryptolebias_marmoratus
ENSVPAG00000004880	SHQ1	97	51.613	ENSLACG00000014243	SHQ1	66	57.788	Latimeria_chalumnae
ENSVPAG00000004880	SHQ1	100	48.629	ENSLOCG00000009970	shq1	90	48.629	Lepisosteus_oculatus
ENSVPAG00000004880	SHQ1	98	56.274	ENSMFAG00000037396	-	82	63.901	Macaca_fascicularis
ENSVPAG00000004880	SHQ1	100	72.097	ENSMFAG00000039148	SHQ1	96	72.659	Macaca_fascicularis
ENSVPAG00000004880	SHQ1	100	71.910	ENSMMUG00000009571	SHQ1	96	72.472	Macaca_mulatta
ENSVPAG00000004880	SHQ1	98	56.084	ENSMMUG00000021761	-	76	66.507	Macaca_mulatta
ENSVPAG00000004880	SHQ1	100	72.097	ENSMNEG00000032667	SHQ1	92	72.659	Macaca_nemestrina
ENSVPAG00000004880	SHQ1	100	71.910	ENSMLEG00000038493	SHQ1	92	72.472	Mandrillus_leucophaeus
ENSVPAG00000004880	SHQ1	96	45.756	ENSMAMG00000023432	shq1	66	50.889	Mastacembelus_armatus
ENSVPAG00000004880	SHQ1	59	60.635	ENSMZEG00005008649	shq1	69	50.115	Maylandia_zebra
ENSVPAG00000004880	SHQ1	97	55.939	ENSMGAG00000009640	SHQ1	70	60.739	Meleagris_gallopavo
ENSVPAG00000004880	SHQ1	100	64.165	ENSMAUG00000022030	Shq1	92	63.602	Mesocricetus_auratus
ENSVPAG00000004880	SHQ1	100	71.482	ENSMICG00000009224	SHQ1	98	71.670	Microcebus_murinus
ENSVPAG00000004880	SHQ1	100	62.852	ENSMOCG00000017836	Shq1	91	62.852	Microtus_ochrogaster
ENSVPAG00000004880	SHQ1	95	57.228	ENSMODG00000003926	SHQ1	89	55.842	Monodelphis_domestica
ENSVPAG00000004880	SHQ1	97	47.448	ENSMALG00000008870	shq1	68	51.220	Monopterus_albus
ENSVPAG00000004880	SHQ1	100	63.039	MGP_CAROLIEiJ_G0028689	Shq1	92	62.664	Mus_caroli
ENSVPAG00000004880	SHQ1	100	63.602	ENSMUSG00000035378	Shq1	92	63.039	Mus_musculus
ENSVPAG00000004880	SHQ1	100	63.790	MGP_PahariEiJ_G0022440	Shq1	92	63.977	Mus_pahari
ENSVPAG00000004880	SHQ1	100	63.790	MGP_SPRETEiJ_G0029717	Shq1	77	67.857	Mus_spretus
ENSVPAG00000004880	SHQ1	100	72.744	ENSMPUG00000017006	SHQ1	90	72.368	Mustela_putorius_furo
ENSVPAG00000004880	SHQ1	97	69.674	ENSMLUG00000013539	SHQ1	80	74.710	Myotis_lucifugus
ENSVPAG00000004880	SHQ1	82	60.959	ENSNGAG00000023317	Shq1	91	56.788	Nannospalax_galili
ENSVPAG00000004880	SHQ1	59	60.635	ENSNBRG00000024004	shq1	81	50.115	Neolamprologus_brichardi
ENSVPAG00000004880	SHQ1	100	74.345	ENSNLEG00000002731	SHQ1	96	72.846	Nomascus_leucogenys
ENSVPAG00000004880	SHQ1	70	47.467	ENSMEUG00000009350	-	69	47.815	Notamacropus_eugenii
ENSVPAG00000004880	SHQ1	98	63.048	ENSODEG00000009192	SHQ1	90	62.405	Octodon_degus
ENSVPAG00000004880	SHQ1	59	60.635	ENSONIG00000020264	shq1	69	49.885	Oreochromis_niloticus
ENSVPAG00000004880	SHQ1	99	69.088	ENSOCUG00000016695	SHQ1	91	68.343	Oryctolagus_cuniculus
ENSVPAG00000004880	SHQ1	72	52.344	ENSORLG00000023538	shq1	55	58.654	Oryzias_latipes
ENSVPAG00000004880	SHQ1	72	52.344	ENSORLG00020003697	shq1	55	58.974	Oryzias_latipes_hni
ENSVPAG00000004880	SHQ1	72	51.562	ENSORLG00015021040	shq1	55	58.333	Oryzias_latipes_hsok
ENSVPAG00000004880	SHQ1	82	81.279	ENSOGAG00000003898	SHQ1	90	74.468	Otolemur_garnettii
ENSVPAG00000004880	SHQ1	100	75.047	ENSOARG00000009547	SHQ1	77	81.333	Ovis_aries
ENSVPAG00000004880	SHQ1	88	68.376	ENSPPAG00000043263	-	82	68.904	Pan_paniscus
ENSVPAG00000004880	SHQ1	100	73.783	ENSPPAG00000027714	SHQ1	96	72.285	Pan_paniscus
ENSVPAG00000004880	SHQ1	100	72.744	ENSPPRG00000004769	SHQ1	92	71.617	Panthera_pardus
ENSVPAG00000004880	SHQ1	100	71.053	ENSPTIG00000011478	SHQ1	91	69.925	Panthera_tigris_altaica
ENSVPAG00000004880	SHQ1	88	67.308	ENSPTRG00000048303	-	81	67.562	Pan_troglodytes
ENSVPAG00000004880	SHQ1	100	73.596	ENSPTRG00000015106	SHQ1	96	72.097	Pan_troglodytes
ENSVPAG00000004880	SHQ1	84	78.174	ENSPANG00000002881	SHQ1	96	72.846	Papio_anubis
ENSVPAG00000004880	SHQ1	72	49.738	ENSPKIG00000021517	shq1	70	45.982	Paramormyrops_kingsleyae
ENSVPAG00000004880	SHQ1	96	60.078	ENSPSIG00000005536	SHQ1	86	58.824	Pelodiscus_sinensis
ENSVPAG00000004880	SHQ1	73	50.384	ENSPMGG00000008838	shq1	70	48.837	Periophthalmus_magnuspinnatus
ENSVPAG00000004880	SHQ1	100	65.103	ENSPEMG00000000251	Shq1	92	63.415	Peromyscus_maniculatus_bairdii
ENSVPAG00000004880	SHQ1	74	45.813	ENSPMAG00000005372	shq1	58	53.933	Petromyzon_marinus
ENSVPAG00000004880	SHQ1	73	52.430	ENSPFOG00000003118	shq1	88	43.945	Poecilia_formosa
ENSVPAG00000004880	SHQ1	58	59.547	ENSPMEG00000011076	shq1	61	62.651	Poecilia_mexicana
ENSVPAG00000004880	SHQ1	72	51.042	ENSPREG00000000591	shq1	75	48.227	Poecilia_reticulata
ENSVPAG00000004880	SHQ1	100	73.221	ENSPPYG00000013717	SHQ1	92	71.910	Pongo_abelii
ENSVPAG00000004880	SHQ1	96	71.820	ENSPCAG00000009035	SHQ1	91	70.172	Procavia_capensis
ENSVPAG00000004880	SHQ1	84	75.166	ENSPCOG00000008415	SHQ1	92	71.933	Propithecus_coquereli
ENSVPAG00000004880	SHQ1	100	75.188	ENSPVAG00000017392	SHQ1	92	74.812	Pteropus_vampyrus
ENSVPAG00000004880	SHQ1	59	60.635	ENSPNYG00000003878	shq1	69	49.885	Pundamilia_nyererei
ENSVPAG00000004880	SHQ1	72	48.964	ENSPNAG00000026840	shq1	66	46.882	Pygocentrus_nattereri
ENSVPAG00000004880	SHQ1	100	60.784	ENSRNOG00000005433	Shq1	92	65.336	Rattus_norvegicus
ENSVPAG00000004880	SHQ1	99	67.925	ENSRBIG00000026280	SHQ1	97	66.415	Rhinopithecus_bieti
ENSVPAG00000004880	SHQ1	99	73.157	ENSRROG00000034126	SHQ1	92	71.456	Rhinopithecus_roxellana
ENSVPAG00000004880	SHQ1	99	70.113	ENSSBOG00000021038	SHQ1	87	100.000	Saimiri_boliviensis_boliviensis
ENSVPAG00000004880	SHQ1	98	56.154	ENSSHAG00000015077	SHQ1	91	56.346	Sarcophilus_harrisii
ENSVPAG00000004880	SHQ1	75	53.125	ENSSFOG00015016241	shq1	66	51.395	Scleropages_formosus
ENSVPAG00000004880	SHQ1	60	63.208	ENSSMAG00000016151	shq1	50	63.107	Scophthalmus_maximus
ENSVPAG00000004880	SHQ1	59	60.494	ENSSDUG00000011986	shq1	70	50.685	Seriola_dumerili
ENSVPAG00000004880	SHQ1	54	62.587	ENSSLDG00000013908	shq1	70	50.457	Seriola_lalandi_dorsalis
ENSVPAG00000004880	SHQ1	100	56.955	ENSSARG00000007119	SHQ1	91	56.579	Sorex_araneus
ENSVPAG00000004880	SHQ1	83	61.348	ENSSPUG00000011526	-	82	61.348	Sphenodon_punctatus
ENSVPAG00000004880	SHQ1	100	77.068	ENSSSCG00000011518	SHQ1	92	76.692	Sus_scrofa
ENSVPAG00000004880	SHQ1	97	56.923	ENSTGUG00000009933	SHQ1	74	62.587	Taeniopygia_guttata
ENSVPAG00000004880	SHQ1	54	56.294	ENSTRUG00000009446	shq1	71	46.889	Takifugu_rubripes
ENSVPAG00000004880	SHQ1	54	55.594	ENSTNIG00000007354	shq1	57	55.472	Tetraodon_nigroviridis
ENSVPAG00000004880	SHQ1	67	86.364	ENSTBEG00000011295	SHQ1	72	62.590	Tupaia_belangeri
ENSVPAG00000004880	SHQ1	100	76.504	ENSTTRG00000005320	SHQ1	92	76.128	Tursiops_truncatus
ENSVPAG00000004880	SHQ1	98	71.209	ENSUMAG00000024031	SHQ1	89	70.825	Ursus_maritimus
ENSVPAG00000004880	SHQ1	84	79.418	ENSVVUG00000013906	SHQ1	91	72.556	Vulpes_vulpes
ENSVPAG00000004880	SHQ1	75	54.156	ENSXETG00000032215	shq1	70	52.727	Xenopus_tropicalis