EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000004969 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 12761 bases
Position: chrGeneScaffold_1486:81396-94156
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000004605	KH_1	PF00013.29	5.2e-12	1	1
ENSVPAP00000004605	DEAD	PF00270.29	2.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000004968	-	1806	-	ENSVPAP00000004605	602 (aa)	-	UPI00018BD579

Gene Model

Click here to download ENSVPAG00000004969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000004969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000004969	-	55	31.700	ENSVPAG00000001979	DDX52	58	31.232
ENSVPAG00000004969	-	94	64.348	ENSVPAG00000007860	-	88	65.405
ENSVPAG00000004969	-	61	41.534	ENSVPAG00000001476	DDX17	52	41.253
ENSVPAG00000004969	-	70	39.171	ENSVPAG00000010759	DDX5	69	39.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000004969	-	100	74.388	ENSAMEG00000007851	-	94	74.388	Ailuropoda_melanoleuca
ENSVPAG00000004969	-	100	79.504	ENSBTAG00000021814	-	94	79.504	Bos_taurus
ENSVPAG00000004969	-	99	69.802	ENSCAFG00020002717	-	94	70.132	Canis_lupus_dingo
ENSVPAG00000004969	-	100	74.098	ENSCAFG00020010029	-	94	74.098	Canis_lupus_dingo
ENSVPAG00000004969	-	100	79.339	ENSCHIG00000017351	-	94	79.339	Capra_hircus
ENSVPAG00000004969	-	76	66.379	ENSCAPG00000004247	-	92	66.379	Cavia_aperea
ENSVPAG00000004969	-	100	72.623	ENSCPOG00000003991	-	94	72.623	Cavia_porcellus
ENSVPAG00000004969	-	100	67.492	ENSCLAG00000010261	-	94	67.492	Chinchilla_lanigera
ENSVPAG00000004969	-	58	77.358	ENSCHOG00000003450	-	62	77.358	Choloepus_hoffmanni
ENSVPAG00000004969	-	100	73.115	ENSCGRG00001001145	Ddx43	94	72.623	Cricetulus_griseus_chok1gshd
ENSVPAG00000004969	-	86	75.856	ENSCGRG00000010217	Ddx43	93	75.856	Cricetulus_griseus_crigri
ENSVPAG00000004969	-	100	73.246	ENSDNOG00000017589	-	94	73.246	Dasypus_novemcinctus
ENSVPAG00000004969	-	100	72.787	ENSDORG00000030010	Ddx43	94	72.787	Dipodomys_ordii
ENSVPAG00000004969	-	78	77.027	ENSETEG00000001887	-	75	77.027	Echinops_telfairi
ENSVPAG00000004969	-	100	74.468	ENSEASG00005004346	-	84	73.650	Equus_asinus_asinus
ENSVPAG00000004969	-	100	74.795	ENSECAG00000017971	DDX43	93	73.977	Equus_caballus
ENSVPAG00000004969	-	100	72.459	ENSFCAG00000031631	-	94	72.459	Felis_catus
ENSVPAG00000004969	-	86	73.194	ENSHGLG00000001118	-	93	73.194	Heterocephalus_glaber_female
ENSVPAG00000004969	-	96	70.068	ENSHGLG00100011895	-	93	69.580	Heterocephalus_glaber_male
ENSVPAG00000004969	-	86	65.259	ENSSTOG00000032538	-	93	65.259	Ictidomys_tridecemlineatus
ENSVPAG00000004969	-	100	72.951	ENSJJAG00000014184	Ddx43	94	72.951	Jaculus_jaculus
ENSVPAG00000004969	-	93	74.427	ENSLAFG00000012755	-	91	75.091	Loxodonta_africana
ENSVPAG00000004969	-	100	73.115	ENSMAUG00000001441	Ddx43	94	72.623	Mesocricetus_auratus
ENSVPAG00000004969	-	100	72.340	ENSMOCG00000012956	Ddx43	94	72.340	Microtus_ochrogaster
ENSVPAG00000004969	-	100	72.787	MGP_CAROLIEiJ_G0032467	Ddx43	94	72.295	Mus_caroli
ENSVPAG00000004969	-	100	72.951	ENSMUSG00000070291	Ddx43	94	72.459	Mus_musculus
ENSVPAG00000004969	-	100	65.789	MGP_PahariEiJ_G0015333	Ddx43	94	65.461	Mus_pahari
ENSVPAG00000004969	-	100	72.951	MGP_SPRETEiJ_G0033607	Ddx43	94	72.459	Mus_spretus
ENSVPAG00000004969	-	100	74.959	ENSMPUG00000004342	-	94	74.959	Mustela_putorius_furo
ENSVPAG00000004969	-	100	74.267	ENSMLUG00000017604	-	94	74.267	Myotis_lucifugus
ENSVPAG00000004969	-	100	71.967	ENSNGAG00000015102	Ddx43	94	71.967	Nannospalax_galili
ENSVPAG00000004969	-	65	86.207	ENSOPRG00000013523	-	71	86.207	Ochotona_princeps
ENSVPAG00000004969	-	83	71.992	ENSODEG00000016207	-	93	71.992	Octodon_degus
ENSVPAG00000004969	-	100	68.852	ENSOCUG00000006338	-	94	68.852	Oryctolagus_cuniculus
ENSVPAG00000004969	-	100	58.882	ENSOCUG00000025811	-	93	58.882	Oryctolagus_cuniculus
ENSVPAG00000004969	-	100	78.843	ENSOARG00000010873	-	94	78.843	Ovis_aries
ENSVPAG00000004969	-	100	72.459	ENSPTIG00000017842	-	94	72.459	Panthera_tigris_altaica
ENSVPAG00000004969	-	86	75.665	ENSPEMG00000023986	Ddx43	93	75.665	Peromyscus_maniculatus_bairdii
ENSVPAG00000004969	-	99	71.334	ENSPCAG00000005962	-	94	71.334	Procavia_capensis
ENSVPAG00000004969	-	86	77.609	ENSPVAG00000012718	-	93	77.609	Pteropus_vampyrus
ENSVPAG00000004969	-	100	73.115	ENSRNOG00000050868	Ddx43	94	72.623	Rattus_norvegicus
ENSVPAG00000004969	-	83	76.424	ENSSARG00000013493	-	93	76.424	Sorex_araneus
ENSVPAG00000004969	-	100	81.322	ENSSSCG00000004287	-	94	81.322	Sus_scrofa
ENSVPAG00000004969	-	75	85.398	ENSTTRG00000001488	-	81	85.398	Tursiops_truncatus
ENSVPAG00000004969	-	88	76.654	ENSUAMG00000012894	-	83	76.654	Ursus_americanus
ENSVPAG00000004969	-	100	74.632	ENSUMAG00000012291	-	94	74.632	Ursus_maritimus
ENSVPAG00000004969	-	100	73.934	ENSVVUG00000013908	-	94	73.934	Vulpes_vulpes