EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000005083 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 848 bases
Position: chrscaffold_126372:101-948
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000004714	Exo_endo_phos	PF03372.23	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005083	APEX1-201	705	-	ENSVPAP00000004714	234 (aa)	-	UPI00018BC264

Gene Model

Click here to download ENSVPAG00000005083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005083's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005083	APEX1	100	90.254	ENSG00000100823	APEX1	74	90.254	Homo_sapiens
ENSVPAG00000005083	APEX1	100	64.681	ENSAPOG00000017002	apex1	77	64.681	Acanthochromis_polyacanthus
ENSVPAG00000005083	APEX1	100	91.525	ENSAMEG00000005418	APEX1	74	91.525	Ailuropoda_melanoleuca
ENSVPAG00000005083	APEX1	100	65.957	ENSACIG00000010653	apex1	79	65.957	Amphilophus_citrinellus
ENSVPAG00000005083	APEX1	100	64.255	ENSAOCG00000009649	apex1	76	64.255	Amphiprion_ocellaris
ENSVPAG00000005083	APEX1	100	64.255	ENSAPEG00000021453	apex1	76	64.255	Amphiprion_percula
ENSVPAG00000005083	APEX1	99	65.385	ENSATEG00000002883	apex1	74	65.385	Anabas_testudineus
ENSVPAG00000005083	APEX1	100	69.362	ENSACAG00000008099	APEX1	74	69.362	Anolis_carolinensis
ENSVPAG00000005083	APEX1	100	90.678	ENSANAG00000030117	APEX1	74	90.678	Aotus_nancymaae
ENSVPAG00000005083	APEX1	100	66.809	ENSACLG00000018441	apex1	76	66.809	Astatotilapia_calliptera
ENSVPAG00000005083	APEX1	100	64.681	ENSAMXG00000034699	apex1	75	64.681	Astyanax_mexicanus
ENSVPAG00000005083	APEX1	100	90.678	ENSBTAG00000002745	APEX1	74	90.678	Bos_taurus
ENSVPAG00000005083	APEX1	99	43.777	WBGene00001372	exo-3	80	43.777	Caenorhabditis_elegans
ENSVPAG00000005083	APEX1	100	91.102	ENSCJAG00000009726	APEX1	74	91.102	Callithrix_jacchus
ENSVPAG00000005083	APEX1	100	91.102	ENSCAFG00000032033	APEX1	74	91.102	Canis_familiaris
ENSVPAG00000005083	APEX1	100	91.102	ENSCAFG00020014377	-	74	91.102	Canis_lupus_dingo
ENSVPAG00000005083	APEX1	100	73.191	ENSCHIG00000014537	-	74	73.191	Capra_hircus
ENSVPAG00000005083	APEX1	100	90.678	ENSCHIG00000007298	-	74	90.678	Capra_hircus
ENSVPAG00000005083	APEX1	100	89.831	ENSTSYG00000034813	APEX1	74	89.831	Carlito_syrichta
ENSVPAG00000005083	APEX1	100	90.678	ENSCAPG00000016235	APEX1	91	90.678	Cavia_aperea
ENSVPAG00000005083	APEX1	100	90.678	ENSCPOG00000030909	APEX1	74	90.678	Cavia_porcellus
ENSVPAG00000005083	APEX1	100	77.542	ENSCCAG00000031931	-	76	77.542	Cebus_capucinus
ENSVPAG00000005083	APEX1	100	91.102	ENSCCAG00000033056	-	74	91.102	Cebus_capucinus
ENSVPAG00000005083	APEX1	100	90.254	ENSCATG00000015580	APEX1	74	90.254	Cercocebus_atys
ENSVPAG00000005083	APEX1	100	89.407	ENSCLAG00000001002	APEX1	74	89.407	Chinchilla_lanigera
ENSVPAG00000005083	APEX1	100	89.831	ENSCSAG00000016670	-	74	89.831	Chlorocebus_sabaeus
ENSVPAG00000005083	APEX1	100	89.831	ENSCSAG00000016685	-	74	89.831	Chlorocebus_sabaeus
ENSVPAG00000005083	APEX1	100	69.787	ENSCPBG00000009567	APEX1	74	69.787	Chrysemys_picta_bellii
ENSVPAG00000005083	APEX1	100	55.319	ENSCING00000008137	-	75	55.319	Ciona_intestinalis
ENSVPAG00000005083	APEX1	100	48.085	ENSCSAVG00000007144	-	92	47.679	Ciona_savignyi
ENSVPAG00000005083	APEX1	100	90.254	ENSCANG00000030726	APEX1	74	90.254	Colobus_angolensis_palliatus
ENSVPAG00000005083	APEX1	100	87.712	ENSCGRG00001017046	Apex1	74	87.712	Cricetulus_griseus_chok1gshd
ENSVPAG00000005083	APEX1	100	87.712	ENSCGRG00000008984	Apex1	74	87.712	Cricetulus_griseus_crigri
ENSVPAG00000005083	APEX1	100	62.553	ENSCSEG00000017499	apex1	76	62.553	Cynoglossus_semilaevis
ENSVPAG00000005083	APEX1	100	65.957	ENSCVAG00000022075	apex1	76	65.957	Cyprinodon_variegatus
ENSVPAG00000005083	APEX1	100	65.106	ENSDARG00000045843	apex1	76	65.106	Danio_rerio
ENSVPAG00000005083	APEX1	100	84.322	ENSDNOG00000042234	APEX1	70	84.322	Dasypus_novemcinctus
ENSVPAG00000005083	APEX1	100	90.254	ENSDORG00000001616	Apex1	74	90.254	Dipodomys_ordii
ENSVPAG00000005083	APEX1	100	87.288	ENSETEG00000004855	-	74	87.288	Echinops_telfairi
ENSVPAG00000005083	APEX1	100	59.322	ENSEBUG00000000622	-	91	59.322	Eptatretus_burgeri
ENSVPAG00000005083	APEX1	100	91.102	ENSEASG00005017489	APEX1	55	91.102	Equus_asinus_asinus
ENSVPAG00000005083	APEX1	100	91.102	ENSECAG00000022325	APEX1	61	91.102	Equus_caballus
ENSVPAG00000005083	APEX1	96	87.611	ENSEEUG00000012569	APEX1	78	87.611	Erinaceus_europaeus
ENSVPAG00000005083	APEX1	100	64.255	ENSELUG00000021706	apex1	75	64.255	Esox_lucius
ENSVPAG00000005083	APEX1	100	90.254	ENSFCAG00000030869	APEX1	74	90.254	Felis_catus
ENSVPAG00000005083	APEX1	100	88.983	ENSFDAG00000006120	APEX1	74	88.983	Fukomys_damarensis
ENSVPAG00000005083	APEX1	100	66.809	ENSFHEG00000009031	apex1	63	66.809	Fundulus_heteroclitus
ENSVPAG00000005083	APEX1	100	61.702	ENSGMOG00000007943	apex1	75	61.702	Gadus_morhua
ENSVPAG00000005083	APEX1	100	66.383	ENSGAFG00000005311	apex1	76	66.383	Gambusia_affinis
ENSVPAG00000005083	APEX1	100	63.830	ENSGACG00000019497	apex1	88	63.830	Gasterosteus_aculeatus
ENSVPAG00000005083	APEX1	100	69.787	ENSGAGG00000014999	APEX1	74	69.787	Gopherus_agassizii
ENSVPAG00000005083	APEX1	100	90.254	ENSGGOG00000002128	APEX1	74	90.254	Gorilla_gorilla
ENSVPAG00000005083	APEX1	100	66.809	ENSHBUG00000005894	apex1	76	66.809	Haplochromis_burtoni
ENSVPAG00000005083	APEX1	100	90.254	ENSHGLG00000002848	APEX1	74	90.254	Heterocephalus_glaber_female
ENSVPAG00000005083	APEX1	100	90.254	ENSHGLG00100017878	APEX1	74	90.254	Heterocephalus_glaber_male
ENSVPAG00000005083	APEX1	100	65.106	ENSHCOG00000009961	apex1	76	65.106	Hippocampus_comes
ENSVPAG00000005083	APEX1	100	64.681	ENSIPUG00000005799	apex1	76	64.681	Ictalurus_punctatus
ENSVPAG00000005083	APEX1	100	90.678	ENSSTOG00000010096	APEX1	74	90.678	Ictidomys_tridecemlineatus
ENSVPAG00000005083	APEX1	100	79.237	ENSJJAG00000003660	-	74	79.237	Jaculus_jaculus
ENSVPAG00000005083	APEX1	100	88.983	ENSJJAG00000012067	-	74	88.983	Jaculus_jaculus
ENSVPAG00000005083	APEX1	100	76.695	ENSJJAG00000020465	-	75	76.695	Jaculus_jaculus
ENSVPAG00000005083	APEX1	100	65.957	ENSKMAG00000021171	apex1	76	65.957	Kryptolebias_marmoratus
ENSVPAG00000005083	APEX1	100	63.404	ENSLBEG00000010248	apex1	76	63.404	Labrus_bergylta
ENSVPAG00000005083	APEX1	100	65.106	ENSLACG00000008617	APEX1	75	65.106	Latimeria_chalumnae
ENSVPAG00000005083	APEX1	100	66.809	ENSLOCG00000015516	apex1	74	66.809	Lepisosteus_oculatus
ENSVPAG00000005083	APEX1	100	88.983	ENSLAFG00000021872	APEX1	74	88.983	Loxodonta_africana
ENSVPAG00000005083	APEX1	100	90.254	ENSMFAG00000002565	APEX1	74	90.254	Macaca_fascicularis
ENSVPAG00000005083	APEX1	100	90.254	ENSMMUG00000048039	APEX1	74	90.254	Macaca_mulatta
ENSVPAG00000005083	APEX1	100	90.254	ENSMNEG00000036944	APEX1	74	90.254	Macaca_nemestrina
ENSVPAG00000005083	APEX1	100	90.254	ENSMLEG00000042125	APEX1	74	90.254	Mandrillus_leucophaeus
ENSVPAG00000005083	APEX1	100	65.957	ENSMAMG00000023526	apex1	76	65.957	Mastacembelus_armatus
ENSVPAG00000005083	APEX1	100	66.809	ENSMZEG00005014187	apex1	76	66.809	Maylandia_zebra
ENSVPAG00000005083	APEX1	100	88.136	ENSMAUG00000013994	Apex1	75	88.136	Mesocricetus_auratus
ENSVPAG00000005083	APEX1	100	90.254	ENSMICG00000043554	APEX1	74	90.254	Microcebus_murinus
ENSVPAG00000005083	APEX1	100	88.136	ENSMOCG00000013721	Apex1	74	88.136	Microtus_ochrogaster
ENSVPAG00000005083	APEX1	100	62.128	ENSMMOG00000010031	apex1	74	62.128	Mola_mola
ENSVPAG00000005083	APEX1	100	84.322	ENSMODG00000007125	APEX1	74	84.322	Monodelphis_domestica
ENSVPAG00000005083	APEX1	100	57.872	ENSMALG00000011699	apex1	62	57.872	Monopterus_albus
ENSVPAG00000005083	APEX1	99	88.511	MGP_CAROLIEiJ_G0019209	Apex1	74	88.511	Mus_caroli
ENSVPAG00000005083	APEX1	100	89.831	ENSMUSG00000035960	Apex1	74	89.831	Mus_musculus
ENSVPAG00000005083	APEX1	100	89.407	MGP_PahariEiJ_G0030232	Apex1	74	89.407	Mus_pahari
ENSVPAG00000005083	APEX1	100	89.831	MGP_SPRETEiJ_G0020101	Apex1	74	89.831	Mus_spretus
ENSVPAG00000005083	APEX1	100	89.831	ENSMLUG00000028957	APEX1	74	89.831	Myotis_lucifugus
ENSVPAG00000005083	APEX1	100	89.831	ENSNGAG00000002725	-	74	89.831	Nannospalax_galili
ENSVPAG00000005083	APEX1	83	69.543	ENSNGAG00000021748	-	57	69.543	Nannospalax_galili
ENSVPAG00000005083	APEX1	100	67.234	ENSNBRG00000005334	apex1	69	67.234	Neolamprologus_brichardi
ENSVPAG00000005083	APEX1	100	90.254	ENSNLEG00000010839	APEX1	75	90.254	Nomascus_leucogenys
ENSVPAG00000005083	APEX1	100	84.746	ENSMEUG00000014519	APEX1	75	84.746	Notamacropus_eugenii
ENSVPAG00000005083	APEX1	100	89.831	ENSOPRG00000014029	APEX1	74	89.831	Ochotona_princeps
ENSVPAG00000005083	APEX1	96	78.414	ENSODEG00000004777	-	76	78.414	Octodon_degus
ENSVPAG00000005083	APEX1	100	68.220	ENSODEG00000006583	-	73	68.220	Octodon_degus
ENSVPAG00000005083	APEX1	100	90.254	ENSODEG00000001703	-	74	90.254	Octodon_degus
ENSVPAG00000005083	APEX1	100	66.809	ENSONIG00000012089	apex1	76	66.809	Oreochromis_niloticus
ENSVPAG00000005083	APEX1	100	80.508	ENSOANG00000008836	APEX1	59	80.508	Ornithorhynchus_anatinus
ENSVPAG00000005083	APEX1	100	90.678	ENSOCUG00000005022	APEX1	74	90.678	Oryctolagus_cuniculus
ENSVPAG00000005083	APEX1	100	65.532	ENSORLG00000012378	apex1	76	65.532	Oryzias_latipes
ENSVPAG00000005083	APEX1	100	65.532	ENSORLG00020021371	apex1	76	65.532	Oryzias_latipes_hni
ENSVPAG00000005083	APEX1	100	65.532	ENSORLG00015020089	apex1	76	65.532	Oryzias_latipes_hsok
ENSVPAG00000005083	APEX1	100	64.681	ENSOMEG00000018876	apex1	76	64.681	Oryzias_melastigma
ENSVPAG00000005083	APEX1	100	88.983	ENSOGAG00000013335	-	74	88.983	Otolemur_garnettii
ENSVPAG00000005083	APEX1	100	76.667	ENSOGAG00000029355	-	76	76.667	Otolemur_garnettii
ENSVPAG00000005083	APEX1	100	89.831	ENSOARG00000019740	-	74	89.831	Ovis_aries
ENSVPAG00000005083	APEX1	100	75.424	ENSOARG00000014424	-	75	75.424	Ovis_aries
ENSVPAG00000005083	APEX1	96	85.398	ENSOARG00000001876	-	73	85.398	Ovis_aries
ENSVPAG00000005083	APEX1	100	90.678	ENSPPAG00000038760	APEX1	75	90.678	Pan_paniscus
ENSVPAG00000005083	APEX1	100	90.254	ENSPPRG00000011794	APEX1	74	90.254	Panthera_pardus
ENSVPAG00000005083	APEX1	100	90.254	ENSPTIG00000014829	APEX1	74	90.254	Panthera_tigris_altaica
ENSVPAG00000005083	APEX1	100	90.678	ENSPTRG00000006093	APEX1	75	90.678	Pan_troglodytes
ENSVPAG00000005083	APEX1	100	90.254	ENSPANG00000022757	APEX1	74	90.254	Papio_anubis
ENSVPAG00000005083	APEX1	100	62.979	ENSPKIG00000003504	apex1	75	62.979	Paramormyrops_kingsleyae
ENSVPAG00000005083	APEX1	100	63.404	ENSPMGG00000016596	apex1	71	63.404	Periophthalmus_magnuspinnatus
ENSVPAG00000005083	APEX1	100	88.983	ENSPEMG00000019097	Apex1	74	88.983	Peromyscus_maniculatus_bairdii
ENSVPAG00000005083	APEX1	100	64.831	ENSPMAG00000007275	-	80	64.831	Petromyzon_marinus
ENSVPAG00000005083	APEX1	100	84.322	ENSPCIG00000023274	APEX1	74	84.322	Phascolarctos_cinereus
ENSVPAG00000005083	APEX1	100	66.809	ENSPFOG00000004178	apex1	76	66.809	Poecilia_formosa
ENSVPAG00000005083	APEX1	100	66.809	ENSPLAG00000012779	apex1	76	66.809	Poecilia_latipinna
ENSVPAG00000005083	APEX1	100	66.809	ENSPMEG00000019623	apex1	76	66.809	Poecilia_mexicana
ENSVPAG00000005083	APEX1	100	66.809	ENSPREG00000014298	apex1	76	66.809	Poecilia_reticulata
ENSVPAG00000005083	APEX1	100	89.831	ENSPPYG00000005565	APEX1	74	89.831	Pongo_abelii
ENSVPAG00000005083	APEX1	100	86.441	ENSPCAG00000010376	APEX1	74	86.441	Procavia_capensis
ENSVPAG00000005083	APEX1	100	90.254	ENSPCOG00000021564	APEX1	74	90.254	Propithecus_coquereli
ENSVPAG00000005083	APEX1	100	89.831	ENSPVAG00000010736	APEX1	74	89.831	Pteropus_vampyrus
ENSVPAG00000005083	APEX1	100	66.809	ENSPNYG00000023940	apex1	76	66.809	Pundamilia_nyererei
ENSVPAG00000005083	APEX1	91	63.721	ENSPNAG00000020897	apex1	72	63.721	Pygocentrus_nattereri
ENSVPAG00000005083	APEX1	100	89.407	ENSRNOG00000009663	Apex1	74	89.407	Rattus_norvegicus
ENSVPAG00000005083	APEX1	100	89.831	ENSRBIG00000038325	APEX1	73	89.831	Rhinopithecus_bieti
ENSVPAG00000005083	APEX1	100	91.102	ENSSBOG00000018921	-	74	91.102	Saimiri_boliviensis_boliviensis
ENSVPAG00000005083	APEX1	100	78.390	ENSSBOG00000031372	-	76	78.390	Saimiri_boliviensis_boliviensis
ENSVPAG00000005083	APEX1	100	83.898	ENSSHAG00000013524	APEX1	73	83.898	Sarcophilus_harrisii
ENSVPAG00000005083	APEX1	100	60.426	ENSSFOG00015001948	apex1	76	60.426	Scleropages_formosus
ENSVPAG00000005083	APEX1	100	62.553	ENSSMAG00000013348	apex1	75	62.553	Scophthalmus_maximus
ENSVPAG00000005083	APEX1	100	63.830	ENSSDUG00000016377	apex1	76	63.830	Seriola_dumerili
ENSVPAG00000005083	APEX1	100	64.681	ENSSLDG00000023005	apex1	76	64.681	Seriola_lalandi_dorsalis
ENSVPAG00000005083	APEX1	99	66.946	ENSSPUG00000000531	APEX1	79	66.946	Sphenodon_punctatus
ENSVPAG00000005083	APEX1	100	66.383	ENSSPAG00000000458	apex1	77	66.383	Stegastes_partitus
ENSVPAG00000005083	APEX1	100	91.525	ENSSSCG00000040060	-	74	91.525	Sus_scrofa
ENSVPAG00000005083	APEX1	100	59.336	ENSSSCG00000039705	-	79	59.336	Sus_scrofa
ENSVPAG00000005083	APEX1	100	55.319	ENSTGUG00000014378	APEX1	100	55.319	Taeniopygia_guttata
ENSVPAG00000005083	APEX1	100	62.979	ENSTRUG00000004268	apex1	71	62.979	Takifugu_rubripes
ENSVPAG00000005083	APEX1	100	62.979	ENSTNIG00000005778	apex1	76	62.979	Tetraodon_nigroviridis
ENSVPAG00000005083	APEX1	99	85.957	ENSTBEG00000006405	APEX1	74	85.957	Tupaia_belangeri
ENSVPAG00000005083	APEX1	100	89.407	ENSTTRG00000007860	APEX1	100	89.407	Tursiops_truncatus
ENSVPAG00000005083	APEX1	100	91.525	ENSUAMG00000010457	APEX1	74	91.525	Ursus_americanus
ENSVPAG00000005083	APEX1	100	91.525	ENSUMAG00000009178	APEX1	74	91.525	Ursus_maritimus
ENSVPAG00000005083	APEX1	100	91.102	ENSVVUG00000009010	APEX1	74	91.102	Vulpes_vulpes
ENSVPAG00000005083	APEX1	100	64.681	ENSXETG00000024773	apex1	74	64.681	Xenopus_tropicalis
ENSVPAG00000005083	APEX1	100	66.383	ENSXCOG00000015233	apex1	76	66.383	Xiphophorus_couchianus
ENSVPAG00000005083	APEX1	100	66.383	ENSXMAG00000006195	apex1	76	66.383	Xiphophorus_maculatus