EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000005179 (Gene tree)
Gene ID: -
Gene Symbol: ZC3H13
Alias: DKFZp434D1812|KIAA0853|Xio
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 104597 bases
Position: chrGeneScaffold_1148:75314-179910
Accession: 20368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000004803	zf-CCCH	PF00642.24	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005178	ZC3H13-201	4956	-	ENSVPAP00000004803	1651 (aa)	-	UPI00018BDA71

Gene Model

Click here to download ENSVPAG00000005179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005179	ZC3H13	61	92.727	ENSG00000123200	ZC3H13	98	97.345	Homo_sapiens
ENSVPAG00000005179	ZC3H13	84	89.650	ENSAMEG00000013117	ZC3H13	84	89.650	Ailuropoda_melanoleuca
ENSVPAG00000005179	ZC3H13	52	63.830	ENSACIG00000001200	zc3h13	73	51.908	Amphilophus_citrinellus
ENSVPAG00000005179	ZC3H13	51	56.911	ENSATEG00000003937	zc3h13	63	56.911	Anabas_testudineus
ENSVPAG00000005179	ZC3H13	84	82.727	ENSAPLG00000002707	ZC3H13	89	82.727	Anas_platyrhynchos
ENSVPAG00000005179	ZC3H13	84	93.636	ENSANAG00000033079	ZC3H13	84	93.636	Aotus_nancymaae
ENSVPAG00000005179	ZC3H13	69	58.065	ENSACLG00000027909	zc3h13	63	58.065	Astatotilapia_calliptera
ENSVPAG00000005179	ZC3H13	84	92.727	ENSCJAG00000016756	ZC3H13	84	92.727	Callithrix_jacchus
ENSVPAG00000005179	ZC3H13	84	90.000	ENSCAFG00000004511	ZC3H13	84	90.000	Canis_familiaris
ENSVPAG00000005179	ZC3H13	84	90.000	ENSCAFG00020019269	ZC3H13	96	87.621	Canis_lupus_dingo
ENSVPAG00000005179	ZC3H13	84	91.818	ENSCHIG00000020072	ZC3H13	84	91.818	Capra_hircus
ENSVPAG00000005179	ZC3H13	84	93.636	ENSTSYG00000000992	ZC3H13	84	93.636	Carlito_syrichta
ENSVPAG00000005179	ZC3H13	84	88.182	ENSCPOG00000000646	ZC3H13	84	88.182	Cavia_porcellus
ENSVPAG00000005179	ZC3H13	77	97.345	ENSCCAG00000032728	ZC3H13	79	97.345	Cebus_capucinus
ENSVPAG00000005179	ZC3H13	61	94.545	ENSCATG00000041075	ZC3H13	84	94.545	Cercocebus_atys
ENSVPAG00000005179	ZC3H13	84	86.146	ENSCLAG00000000610	ZC3H13	84	86.465	Chinchilla_lanigera
ENSVPAG00000005179	ZC3H13	61	93.636	ENSCSAG00000017764	ZC3H13	84	93.636	Chlorocebus_sabaeus
ENSVPAG00000005179	ZC3H13	76	93.805	ENSCHOG00000009724	ZC3H13	76	93.805	Choloepus_hoffmanni
ENSVPAG00000005179	ZC3H13	84	92.727	ENSCANG00000037422	ZC3H13	84	92.727	Colobus_angolensis_palliatus
ENSVPAG00000005179	ZC3H13	65	91.818	ENSCGRG00001014490	Zc3h13	83	91.818	Cricetulus_griseus_chok1gshd
ENSVPAG00000005179	ZC3H13	65	91.818	ENSCGRG00000002575	Zc3h13	83	91.818	Cricetulus_griseus_crigri
ENSVPAG00000005179	ZC3H13	60	61.616	ENSCSEG00000010275	zc3h13	54	61.616	Cynoglossus_semilaevis
ENSVPAG00000005179	ZC3H13	77	58.537	ENSCVAG00000014663	zc3h13	74	58.537	Cyprinodon_variegatus
ENSVPAG00000005179	ZC3H13	84	90.909	ENSDNOG00000005390	ZC3H13	84	90.909	Dasypus_novemcinctus
ENSVPAG00000005179	ZC3H13	79	98.667	ENSDORG00000000600	Zc3h13	80	98.667	Dipodomys_ordii
ENSVPAG00000005179	ZC3H13	84	90.909	ENSEASG00005017100	ZC3H13	84	90.909	Equus_asinus_asinus
ENSVPAG00000005179	ZC3H13	80	95.527	ENSECAG00000022843	ZC3H13	84	90.909	Equus_caballus
ENSVPAG00000005179	ZC3H13	84	90.909	ENSFCAG00000004877	ZC3H13	84	90.909	Felis_catus
ENSVPAG00000005179	ZC3H13	65	78.182	ENSFALG00000008196	ZC3H13	69	78.182	Ficedula_albicollis
ENSVPAG00000005179	ZC3H13	84	89.091	ENSFDAG00000012323	ZC3H13	84	89.091	Fukomys_damarensis
ENSVPAG00000005179	ZC3H13	84	80.909	ENSGALG00000016984	ZC3H13	64	80.909	Gallus_gallus
ENSVPAG00000005179	ZC3H13	80	55.372	ENSGACG00000015166	zc3h13	67	55.372	Gasterosteus_aculeatus
ENSVPAG00000005179	ZC3H13	61	91.818	ENSGGOG00000005496	ZC3H13	84	91.818	Gorilla_gorilla
ENSVPAG00000005179	ZC3H13	72	54.918	ENSHBUG00000007100	zc3h13	63	54.918	Haplochromis_burtoni
ENSVPAG00000005179	ZC3H13	84	88.182	ENSHGLG00000006309	ZC3H13	84	88.182	Heterocephalus_glaber_female
ENSVPAG00000005179	ZC3H13	84	88.182	ENSHGLG00100007460	ZC3H13	83	88.182	Heterocephalus_glaber_male
ENSVPAG00000005179	ZC3H13	84	91.818	ENSSTOG00000029682	ZC3H13	84	91.818	Ictidomys_tridecemlineatus
ENSVPAG00000005179	ZC3H13	84	90.909	ENSJJAG00000019971	Zc3h13	84	90.909	Jaculus_jaculus
ENSVPAG00000005179	ZC3H13	61	58.197	ENSKMAG00000010701	zc3h13	68	58.197	Kryptolebias_marmoratus
ENSVPAG00000005179	ZC3H13	84	73.636	ENSLACG00000003806	ZC3H13	86	73.636	Latimeria_chalumnae
ENSVPAG00000005179	ZC3H13	61	93.636	ENSMFAG00000004060	ZC3H13	84	93.636	Macaca_fascicularis
ENSVPAG00000005179	ZC3H13	61	93.636	ENSMMUG00000017025	ZC3H13	84	93.636	Macaca_mulatta
ENSVPAG00000005179	ZC3H13	61	93.636	ENSMNEG00000044356	ZC3H13	84	93.636	Macaca_nemestrina
ENSVPAG00000005179	ZC3H13	61	94.545	ENSMLEG00000039387	ZC3H13	64	94.545	Mandrillus_leucophaeus
ENSVPAG00000005179	ZC3H13	71	56.098	ENSMAMG00000022274	zc3h13	87	56.098	Mastacembelus_armatus
ENSVPAG00000005179	ZC3H13	69	58.065	ENSMZEG00005007473	zc3h13	63	58.065	Maylandia_zebra
ENSVPAG00000005179	ZC3H13	84	81.818	ENSMGAG00000014996	ZC3H13	63	81.818	Meleagris_gallopavo
ENSVPAG00000005179	ZC3H13	84	90.909	ENSMICG00000014772	ZC3H13	84	90.909	Microcebus_murinus
ENSVPAG00000005179	ZC3H13	83	87.387	ENSMODG00000014969	ZC3H13	68	87.387	Monodelphis_domestica
ENSVPAG00000005179	ZC3H13	70	67.021	ENSMALG00000010585	zc3h13	56	67.021	Monopterus_albus
ENSVPAG00000005179	ZC3H13	53	91.150	MGP_CAROLIEiJ_G0019512	Zc3h13	84	90.909	Mus_caroli
ENSVPAG00000005179	ZC3H13	53	90.265	ENSMUSG00000022000	Zc3h13	84	90.000	Mus_musculus
ENSVPAG00000005179	ZC3H13	84	90.000	MGP_PahariEiJ_G0030530	Zc3h13	84	90.000	Mus_pahari
ENSVPAG00000005179	ZC3H13	53	91.150	MGP_SPRETEiJ_G0020407	Zc3h13	84	90.000	Mus_spretus
ENSVPAG00000005179	ZC3H13	84	89.968	ENSMPUG00000001602	ZC3H13	83	89.968	Mustela_putorius_furo
ENSVPAG00000005179	ZC3H13	84	89.091	ENSMLUG00000006920	ZC3H13	84	89.091	Myotis_lucifugus
ENSVPAG00000005179	ZC3H13	84	86.364	ENSNGAG00000002157	Zc3h13	84	86.364	Nannospalax_galili
ENSVPAG00000005179	ZC3H13	84	93.636	ENSNLEG00000002498	ZC3H13	84	93.636	Nomascus_leucogenys
ENSVPAG00000005179	ZC3H13	84	90.000	ENSODEG00000005178	ZC3H13	84	90.000	Octodon_degus
ENSVPAG00000005179	ZC3H13	74	64.894	ENSONIG00000012236	zc3h13	63	64.894	Oreochromis_niloticus
ENSVPAG00000005179	ZC3H13	84	85.455	ENSOANG00000015580	ZC3H13	84	85.455	Ornithorhynchus_anatinus
ENSVPAG00000005179	ZC3H13	84	92.727	ENSOCUG00000015173	ZC3H13	84	92.727	Oryctolagus_cuniculus
ENSVPAG00000005179	ZC3H13	50	69.880	ENSORLG00000005201	zc3h13	50	69.880	Oryzias_latipes
ENSVPAG00000005179	ZC3H13	51	67.442	ENSORLG00020016576	zc3h13	50	67.442	Oryzias_latipes_hni
ENSVPAG00000005179	ZC3H13	51	64.516	ENSORLG00015014966	zc3h13	51	64.516	Oryzias_latipes_hsok
ENSVPAG00000005179	ZC3H13	64	59.130	ENSOMEG00000007044	zc3h13	75	59.130	Oryzias_melastigma
ENSVPAG00000005179	ZC3H13	84	92.727	ENSOGAG00000012032	ZC3H13	84	92.727	Otolemur_garnettii
ENSVPAG00000005179	ZC3H13	84	91.818	ENSOARG00000007790	ZC3H13	84	91.818	Ovis_aries
ENSVPAG00000005179	ZC3H13	84	92.727	ENSPPAG00000034465	ZC3H13	85	92.727	Pan_paniscus
ENSVPAG00000005179	ZC3H13	84	90.000	ENSPPRG00000005440	ZC3H13	84	90.000	Panthera_pardus
ENSVPAG00000005179	ZC3H13	84	90.000	ENSPTIG00000014867	ZC3H13	84	90.000	Panthera_tigris_altaica
ENSVPAG00000005179	ZC3H13	84	92.727	ENSPTRG00000005851	ZC3H13	84	92.727	Pan_troglodytes
ENSVPAG00000005179	ZC3H13	65	93.636	ENSPANG00000014127	ZC3H13	84	93.636	Papio_anubis
ENSVPAG00000005179	ZC3H13	84	86.486	ENSPCIG00000029529	ZC3H13	84	86.486	Phascolarctos_cinereus
ENSVPAG00000005179	ZC3H13	62	57.851	ENSPLAG00000014095	zc3h13	58	57.851	Poecilia_latipinna
ENSVPAG00000005179	ZC3H13	61	57.025	ENSPMEG00000006928	zc3h13	74	57.025	Poecilia_mexicana
ENSVPAG00000005179	ZC3H13	72	90.909	ENSPCAG00000001146	ZC3H13	72	91.026	Procavia_capensis
ENSVPAG00000005179	ZC3H13	69	92.251	ENSPVAG00000012353	ZC3H13	72	92.251	Pteropus_vampyrus
ENSVPAG00000005179	ZC3H13	63	54.918	ENSPNYG00000016000	zc3h13	63	54.918	Pundamilia_nyererei
ENSVPAG00000005179	ZC3H13	84	63.636	ENSPNAG00000011008	zc3h13	54	63.636	Pygocentrus_nattereri
ENSVPAG00000005179	ZC3H13	53	89.381	ENSRNOG00000011237	Zc3h13	84	88.182	Rattus_norvegicus
ENSVPAG00000005179	ZC3H13	84	93.636	ENSRBIG00000010463	ZC3H13	84	93.636	Rhinopithecus_bieti
ENSVPAG00000005179	ZC3H13	79	97.345	ENSSBOG00000027228	ZC3H13	84	90.909	Saimiri_boliviensis_boliviensis
ENSVPAG00000005179	ZC3H13	51	54.472	ENSSMAG00000007110	zc3h13	64	54.472	Scophthalmus_maximus
ENSVPAG00000005179	ZC3H13	60	56.911	ENSSDUG00000021808	zc3h13	88	50.463	Seriola_dumerili
ENSVPAG00000005179	ZC3H13	71	90.909	ENSSARG00000007106	ZC3H13	71	90.909	Sorex_araneus
ENSVPAG00000005179	ZC3H13	79	81.132	ENSSPUG00000013358	ZC3H13	82	81.132	Sphenodon_punctatus
ENSVPAG00000005179	ZC3H13	50	55.556	ENSSPAG00000019966	zc3h13	74	55.556	Stegastes_partitus
ENSVPAG00000005179	ZC3H13	84	92.727	ENSSSCG00000009414	ZC3H13	84	92.727	Sus_scrofa
ENSVPAG00000005179	ZC3H13	64	51.200	ENSTNIG00000014523	zc3h13	82	51.200	Tetraodon_nigroviridis
ENSVPAG00000005179	ZC3H13	79	98.230	ENSTTRG00000003611	ZC3H13	79	98.230	Tursiops_truncatus
ENSVPAG00000005179	ZC3H13	84	89.650	ENSUMAG00000016220	ZC3H13	84	89.650	Ursus_maritimus
ENSVPAG00000005179	ZC3H13	84	89.490	ENSVVUG00000028395	ZC3H13	84	89.490	Vulpes_vulpes
ENSVPAG00000005179	ZC3H13	84	68.182	ENSXETG00000014637	zc3h13	95	59.514	Xenopus_tropicalis
ENSVPAG00000005179	ZC3H13	64	56.557	ENSXMAG00000012423	zc3h13	67	56.667	Xiphophorus_maculatus