EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000005281 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 23618 bases
Position: chrGeneScaffold_1558:149853-173470
Accession: 102543816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000004902	PRP4	PF08799.11	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005281	PRPF4-201	1569	-	ENSVPAP00000004902	522 (aa)	XP_006211411	UPI00018BD1E7

Gene Model

Click here to download ENSVPAG00000005281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005281	PRPF4	100	99.234	ENSG00000136875	PRPF4	100	99.234	Homo_sapiens
ENSVPAG00000005281	PRPF4	96	76.987	ENSAPOG00000014132	prpf4	98	76.987	Acanthochromis_polyacanthus
ENSVPAG00000005281	PRPF4	100	99.042	ENSAMEG00000013048	PRPF4	98	99.042	Ailuropoda_melanoleuca
ENSVPAG00000005281	PRPF4	96	76.786	ENSACIG00000005579	prpf4	99	76.786	Amphilophus_citrinellus
ENSVPAG00000005281	PRPF4	96	76.436	ENSAOCG00000005457	prpf4	99	76.436	Amphiprion_ocellaris
ENSVPAG00000005281	PRPF4	96	76.238	ENSAPEG00000000776	prpf4	99	76.238	Amphiprion_percula
ENSVPAG00000005281	PRPF4	96	76.190	ENSATEG00000023013	prpf4	99	76.190	Anabas_testudineus
ENSVPAG00000005281	PRPF4	99	89.788	ENSAPLG00000006534	PRPF4	96	90.643	Anas_platyrhynchos
ENSVPAG00000005281	PRPF4	100	89.885	ENSACAG00000015110	PRPF4	100	89.885	Anolis_carolinensis
ENSVPAG00000005281	PRPF4	100	99.234	ENSANAG00000022464	PRPF4	96	99.234	Aotus_nancymaae
ENSVPAG00000005281	PRPF4	96	76.587	ENSACLG00000019031	prpf4	99	76.587	Astatotilapia_calliptera
ENSVPAG00000005281	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSVPAG00000005281	PRPF4	100	98.276	ENSBTAG00000004571	PRPF4	100	98.276	Bos_taurus
ENSVPAG00000005281	PRPF4	90	44.093	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSVPAG00000005281	PRPF4	100	99.425	ENSCJAG00000017856	PRPF4	100	99.425	Callithrix_jacchus
ENSVPAG00000005281	PRPF4	100	99.042	ENSCAFG00000003224	PRPF4	97	99.042	Canis_familiaris
ENSVPAG00000005281	PRPF4	100	99.042	ENSCAFG00020022637	PRPF4	100	99.042	Canis_lupus_dingo
ENSVPAG00000005281	PRPF4	100	98.851	ENSCHIG00000024648	-	100	98.851	Capra_hircus
ENSVPAG00000005281	PRPF4	100	98.851	ENSTSYG00000010366	PRPF4	100	98.851	Carlito_syrichta
ENSVPAG00000005281	PRPF4	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSVPAG00000005281	PRPF4	100	98.851	ENSCPOG00000010747	-	100	98.851	Cavia_porcellus
ENSVPAG00000005281	PRPF4	100	92.337	ENSCPOG00000014729	-	100	92.337	Cavia_porcellus
ENSVPAG00000005281	PRPF4	100	99.042	ENSCCAG00000028990	PRPF4	100	99.042	Cebus_capucinus
ENSVPAG00000005281	PRPF4	100	98.851	ENSCATG00000021552	PRPF4	100	98.851	Cercocebus_atys
ENSVPAG00000005281	PRPF4	100	99.042	ENSCLAG00000013448	PRPF4	100	99.042	Chinchilla_lanigera
ENSVPAG00000005281	PRPF4	87	96.018	ENSCHOG00000007233	PRPF4	100	96.018	Choloepus_hoffmanni
ENSVPAG00000005281	PRPF4	99	91.103	ENSCPBG00000019136	PRPF4	74	91.103	Chrysemys_picta_bellii
ENSVPAG00000005281	PRPF4	96	59.055	ENSCING00000001299	-	97	58.416	Ciona_intestinalis
ENSVPAG00000005281	PRPF4	94	58.468	ENSCSAVG00000009178	-	99	59.091	Ciona_savignyi
ENSVPAG00000005281	PRPF4	100	99.042	ENSCANG00000003246	PRPF4	100	99.042	Colobus_angolensis_palliatus
ENSVPAG00000005281	PRPF4	100	98.851	ENSCGRG00001016992	Prpf4	100	98.851	Cricetulus_griseus_chok1gshd
ENSVPAG00000005281	PRPF4	100	98.851	ENSCGRG00000017560	Prpf4	100	98.851	Cricetulus_griseus_crigri
ENSVPAG00000005281	PRPF4	97	75.446	ENSCSEG00000020451	prpf4	99	75.446	Cynoglossus_semilaevis
ENSVPAG00000005281	PRPF4	97	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSVPAG00000005281	PRPF4	100	97.893	ENSDNOG00000013203	PRPF4	100	97.893	Dasypus_novemcinctus
ENSVPAG00000005281	PRPF4	100	98.851	ENSDORG00000026275	Prpf4	100	98.851	Dipodomys_ordii
ENSVPAG00000005281	PRPF4	87	56.455	FBgn0036733	U4-U6-60K	99	50.365	Drosophila_melanogaster
ENSVPAG00000005281	PRPF4	100	97.132	ENSETEG00000020389	PRPF4	100	97.132	Echinops_telfairi
ENSVPAG00000005281	PRPF4	96	72.769	ENSEBUG00000015229	prpf4	87	73.227	Eptatretus_burgeri
ENSVPAG00000005281	PRPF4	100	99.234	ENSEASG00005022678	PRPF4	100	99.234	Equus_asinus_asinus
ENSVPAG00000005281	PRPF4	100	99.234	ENSECAG00000007072	PRPF4	100	99.234	Equus_caballus
ENSVPAG00000005281	PRPF4	100	78.166	ENSEEUG00000007480	PRPF4	100	78.166	Erinaceus_europaeus
ENSVPAG00000005281	PRPF4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSVPAG00000005281	PRPF4	100	99.425	ENSFCAG00000005514	PRPF4	100	99.425	Felis_catus
ENSVPAG00000005281	PRPF4	98	87.973	ENSFALG00000005423	PRPF4	90	85.806	Ficedula_albicollis
ENSVPAG00000005281	PRPF4	100	98.851	ENSFDAG00000005839	PRPF4	100	98.851	Fukomys_damarensis
ENSVPAG00000005281	PRPF4	96	75.794	ENSFHEG00000001300	prpf4	99	75.794	Fundulus_heteroclitus
ENSVPAG00000005281	PRPF4	98	90.411	ENSGALG00000008857	PRPF4	96	90.058	Gallus_gallus
ENSVPAG00000005281	PRPF4	65	70.294	ENSGAFG00000012164	prpf4	70	70.294	Gambusia_affinis
ENSVPAG00000005281	PRPF4	96	69.444	ENSGACG00000015476	prpf4	99	68.651	Gasterosteus_aculeatus
ENSVPAG00000005281	PRPF4	99	90.909	ENSGAGG00000025029	PRPF4	96	90.909	Gopherus_agassizii
ENSVPAG00000005281	PRPF4	100	99.042	ENSGGOG00000006943	PRPF4	100	99.042	Gorilla_gorilla
ENSVPAG00000005281	PRPF4	96	76.389	ENSHBUG00000000562	prpf4	99	76.389	Haplochromis_burtoni
ENSVPAG00000005281	PRPF4	100	80.268	ENSHGLG00000003838	-	100	80.268	Heterocephalus_glaber_female
ENSVPAG00000005281	PRPF4	100	81.489	ENSHGLG00000016628	-	100	82.252	Heterocephalus_glaber_female
ENSVPAG00000005281	PRPF4	100	98.851	ENSHGLG00000015191	PRPF4	100	98.851	Heterocephalus_glaber_female
ENSVPAG00000005281	PRPF4	100	80.268	ENSHGLG00100005571	-	100	80.268	Heterocephalus_glaber_male
ENSVPAG00000005281	PRPF4	97	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSVPAG00000005281	PRPF4	100	98.659	ENSSTOG00000027833	PRPF4	100	98.659	Ictidomys_tridecemlineatus
ENSVPAG00000005281	PRPF4	100	98.851	ENSJJAG00000008838	Prpf4	100	98.851	Jaculus_jaculus
ENSVPAG00000005281	PRPF4	96	75.794	ENSKMAG00000013236	prpf4	99	75.794	Kryptolebias_marmoratus
ENSVPAG00000005281	PRPF4	96	75.498	ENSLBEG00000020611	prpf4	99	75.498	Labrus_bergylta
ENSVPAG00000005281	PRPF4	98	80.859	ENSLACG00000016317	PRPF4	98	80.859	Latimeria_chalumnae
ENSVPAG00000005281	PRPF4	97	81.386	ENSLOCG00000000581	prpf4	99	81.386	Lepisosteus_oculatus
ENSVPAG00000005281	PRPF4	100	97.893	ENSLAFG00000018225	PRPF4	100	97.893	Loxodonta_africana
ENSVPAG00000005281	PRPF4	100	98.659	ENSMFAG00000039397	PRPF4	100	98.659	Macaca_fascicularis
ENSVPAG00000005281	PRPF4	100	98.851	ENSMMUG00000005844	PRPF4	100	98.851	Macaca_mulatta
ENSVPAG00000005281	PRPF4	100	87.548	ENSMNEG00000033737	PRPF4	100	88.506	Macaca_nemestrina
ENSVPAG00000005281	PRPF4	100	98.851	ENSMLEG00000040284	PRPF4	100	98.851	Mandrillus_leucophaeus
ENSVPAG00000005281	PRPF4	97	75.740	ENSMAMG00000020141	prpf4	99	75.740	Mastacembelus_armatus
ENSVPAG00000005281	PRPF4	96	76.587	ENSMZEG00005023205	prpf4	99	76.587	Maylandia_zebra
ENSVPAG00000005281	PRPF4	99	88.676	ENSMGAG00000001796	PRPF4	97	88.676	Meleagris_gallopavo
ENSVPAG00000005281	PRPF4	100	98.276	ENSMAUG00000018022	Prpf4	100	98.276	Mesocricetus_auratus
ENSVPAG00000005281	PRPF4	100	98.659	ENSMICG00000015022	PRPF4	100	98.659	Microcebus_murinus
ENSVPAG00000005281	PRPF4	100	98.276	ENSMOCG00000018273	Prpf4	100	98.276	Microtus_ochrogaster
ENSVPAG00000005281	PRPF4	97	74.455	ENSMMOG00000021177	prpf4	99	74.455	Mola_mola
ENSVPAG00000005281	PRPF4	100	94.656	ENSMODG00000004444	-	100	94.656	Monodelphis_domestica
ENSVPAG00000005281	PRPF4	100	94.646	ENSMODG00000025096	-	97	94.646	Monodelphis_domestica
ENSVPAG00000005281	PRPF4	96	76.190	ENSMALG00000013624	prpf4	99	76.190	Monopterus_albus
ENSVPAG00000005281	PRPF4	100	98.659	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.659	Mus_caroli
ENSVPAG00000005281	PRPF4	100	98.659	ENSMUSG00000066148	Prpf4	100	98.659	Mus_musculus
ENSVPAG00000005281	PRPF4	100	98.467	MGP_PahariEiJ_G0028413	Prpf4	100	98.467	Mus_pahari
ENSVPAG00000005281	PRPF4	100	98.659	MGP_SPRETEiJ_G0027042	Prpf4	100	98.659	Mus_spretus
ENSVPAG00000005281	PRPF4	100	99.042	ENSMPUG00000007883	PRPF4	100	99.042	Mustela_putorius_furo
ENSVPAG00000005281	PRPF4	100	99.042	ENSMLUG00000015309	-	97	99.042	Myotis_lucifugus
ENSVPAG00000005281	PRPF4	100	97.126	ENSMLUG00000008626	-	97	97.126	Myotis_lucifugus
ENSVPAG00000005281	PRPF4	100	93.487	ENSNGAG00000000468	Prpf4	100	93.487	Nannospalax_galili
ENSVPAG00000005281	PRPF4	96	76.786	ENSNBRG00000007972	prpf4	99	76.786	Neolamprologus_brichardi
ENSVPAG00000005281	PRPF4	100	99.234	ENSNLEG00000016647	PRPF4	100	99.234	Nomascus_leucogenys
ENSVPAG00000005281	PRPF4	98	95.303	ENSMEUG00000013256	PRPF4	99	95.303	Notamacropus_eugenii
ENSVPAG00000005281	PRPF4	100	98.659	ENSOPRG00000005302	PRPF4	100	98.659	Ochotona_princeps
ENSVPAG00000005281	PRPF4	100	99.234	ENSODEG00000018147	PRPF4	100	99.234	Octodon_degus
ENSVPAG00000005281	PRPF4	99	74.713	ENSONIG00000012671	prpf4	99	76.587	Oreochromis_niloticus
ENSVPAG00000005281	PRPF4	100	99.042	ENSOCUG00000005046	PRPF4	100	99.042	Oryctolagus_cuniculus
ENSVPAG00000005281	PRPF4	96	74.950	ENSORLG00000019641	prpf4	98	74.950	Oryzias_latipes
ENSVPAG00000005281	PRPF4	96	74.950	ENSORLG00020019438	prpf4	98	74.950	Oryzias_latipes_hni
ENSVPAG00000005281	PRPF4	96	74.788	ENSOMEG00000020941	prpf4	98	74.788	Oryzias_melastigma
ENSVPAG00000005281	PRPF4	100	94.636	ENSOGAG00000007802	PRPF4	98	94.636	Otolemur_garnettii
ENSVPAG00000005281	PRPF4	100	98.659	ENSOARG00000006319	PRPF4	97	98.659	Ovis_aries
ENSVPAG00000005281	PRPF4	100	99.042	ENSPPAG00000041797	PRPF4	100	99.042	Pan_paniscus
ENSVPAG00000005281	PRPF4	100	99.234	ENSPPRG00000014360	PRPF4	100	99.234	Panthera_pardus
ENSVPAG00000005281	PRPF4	100	99.234	ENSPTIG00000009574	PRPF4	100	99.234	Panthera_tigris_altaica
ENSVPAG00000005281	PRPF4	100	99.234	ENSPTRG00000021274	PRPF4	100	99.234	Pan_troglodytes
ENSVPAG00000005281	PRPF4	100	98.659	ENSPANG00000025776	PRPF4	96	98.659	Papio_anubis
ENSVPAG00000005281	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSVPAG00000005281	PRPF4	98	90.856	ENSPSIG00000010713	PRPF4	90	90.856	Pelodiscus_sinensis
ENSVPAG00000005281	PRPF4	99	58.349	ENSPMGG00000000997	prpf4	99	58.349	Periophthalmus_magnuspinnatus
ENSVPAG00000005281	PRPF4	100	98.851	ENSPEMG00000024115	Prpf4	100	98.851	Peromyscus_maniculatus_bairdii
ENSVPAG00000005281	PRPF4	98	95.303	ENSPCIG00000003821	PRPF4	99	95.303	Phascolarctos_cinereus
ENSVPAG00000005281	PRPF4	96	69.822	ENSPFOG00000013524	prpf4	98	72.671	Poecilia_formosa
ENSVPAG00000005281	PRPF4	84	69.527	ENSPLAG00000011620	prpf4	96	71.739	Poecilia_latipinna
ENSVPAG00000005281	PRPF4	91	73.795	ENSPMEG00000006813	prpf4	98	73.795	Poecilia_mexicana
ENSVPAG00000005281	PRPF4	98	98.833	ENSPCAG00000002561	PRPF4	100	98.833	Procavia_capensis
ENSVPAG00000005281	PRPF4	100	99.042	ENSPCOG00000011975	PRPF4	100	99.042	Propithecus_coquereli
ENSVPAG00000005281	PRPF4	100	95.402	ENSPVAG00000004708	PRPF4	100	95.402	Pteropus_vampyrus
ENSVPAG00000005281	PRPF4	96	76.587	ENSPNYG00000008013	prpf4	99	76.587	Pundamilia_nyererei
ENSVPAG00000005281	PRPF4	97	80.000	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSVPAG00000005281	PRPF4	100	98.467	ENSRNOG00000014777	Prpf4	100	98.467	Rattus_norvegicus
ENSVPAG00000005281	PRPF4	100	99.042	ENSRBIG00000040221	PRPF4	100	99.042	Rhinopithecus_bieti
ENSVPAG00000005281	PRPF4	100	99.042	ENSRROG00000040240	PRPF4	100	99.042	Rhinopithecus_roxellana
ENSVPAG00000005281	PRPF4	100	95.229	ENSSHAG00000017658	PRPF4	100	95.229	Sarcophilus_harrisii
ENSVPAG00000005281	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSVPAG00000005281	PRPF4	96	75.198	ENSSMAG00000008889	prpf4	99	75.198	Scophthalmus_maximus
ENSVPAG00000005281	PRPF4	96	73.547	ENSSDUG00000022083	prpf4	97	73.747	Seriola_dumerili
ENSVPAG00000005281	PRPF4	96	73.307	ENSSLDG00000008115	prpf4	98	73.506	Seriola_lalandi_dorsalis
ENSVPAG00000005281	PRPF4	100	90.421	ENSSPUG00000015582	PRPF4	100	90.421	Sphenodon_punctatus
ENSVPAG00000005281	PRPF4	96	70.809	ENSSPAG00000011286	prpf4	99	70.809	Stegastes_partitus
ENSVPAG00000005281	PRPF4	100	99.234	ENSSSCG00000024648	PRPF4	100	99.234	Sus_scrofa
ENSVPAG00000005281	PRPF4	94	91.207	ENSTGUG00000002623	PRPF4	100	91.207	Taeniopygia_guttata
ENSVPAG00000005281	PRPF4	97	75.296	ENSTRUG00000008853	prpf4	99	75.296	Takifugu_rubripes
ENSVPAG00000005281	PRPF4	97	74.653	ENSTNIG00000013250	prpf4	99	74.653	Tetraodon_nigroviridis
ENSVPAG00000005281	PRPF4	100	90.805	ENSTBEG00000000821	PRPF4	100	90.805	Tupaia_belangeri
ENSVPAG00000005281	PRPF4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSVPAG00000005281	PRPF4	64	96.119	ENSUAMG00000018288	PRPF4	90	96.119	Ursus_americanus
ENSVPAG00000005281	PRPF4	100	98.276	ENSUMAG00000019375	PRPF4	100	98.276	Ursus_maritimus
ENSVPAG00000005281	PRPF4	100	97.909	ENSVVUG00000002476	PRPF4	100	97.909	Vulpes_vulpes
ENSVPAG00000005281	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.406	Xiphophorus_couchianus
ENSVPAG00000005281	PRPF4	87	64.192	ENSXMAG00000002750	prpf4	98	65.010	Xiphophorus_maculatus