EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000005375 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 18318 bases
Position: chrGeneScaffold_515:4245-22562
Accession: 102540079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000004992	RtcB	PF01139.17	2.6e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005375	RTCB-201	1518	-	ENSVPAP00000004992	505 (aa)	XP_006205922	UPI00018BDE9A

Gene Model

Click here to download ENSVPAG00000005375's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005375's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005375	RTCB	100	99.802	ENSG00000100220	RTCB	100	99.802	Homo_sapiens
ENSVPAG00000005375	RTCB	100	94.455	ENSAPOG00000006040	rtcb	100	94.455	Acanthochromis_polyacanthus
ENSVPAG00000005375	RTCB	100	99.604	ENSAMEG00000016152	RTCB	100	99.604	Ailuropoda_melanoleuca
ENSVPAG00000005375	RTCB	100	90.099	ENSACIG00000009083	rtcb	100	90.099	Amphilophus_citrinellus
ENSVPAG00000005375	RTCB	100	94.653	ENSAOCG00000005662	rtcb	100	95.217	Amphiprion_ocellaris
ENSVPAG00000005375	RTCB	96	89.528	ENSAPEG00000024653	rtcb	100	89.528	Amphiprion_percula
ENSVPAG00000005375	RTCB	100	94.653	ENSAPEG00000024701	rtcb	100	94.653	Amphiprion_percula
ENSVPAG00000005375	RTCB	100	94.257	ENSATEG00000000618	rtcb	100	94.257	Anabas_testudineus
ENSVPAG00000005375	RTCB	100	93.642	ENSACAG00000014817	RTCB	100	93.642	Anolis_carolinensis
ENSVPAG00000005375	RTCB	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
ENSVPAG00000005375	RTCB	100	62.846	ENSANAG00000023724	-	100	62.846	Aotus_nancymaae
ENSVPAG00000005375	RTCB	100	93.069	ENSACLG00000008367	rtcb	100	93.913	Astatotilapia_calliptera
ENSVPAG00000005375	RTCB	100	94.257	ENSAMXG00000042320	rtcb	100	94.257	Astyanax_mexicanus
ENSVPAG00000005375	RTCB	100	99.406	ENSBTAG00000011070	RTCB	100	99.406	Bos_taurus
ENSVPAG00000005375	RTCB	100	72.871	WBGene00008877	rtcb-1	100	72.871	Caenorhabditis_elegans
ENSVPAG00000005375	RTCB	100	99.406	ENSCJAG00000006128	RTCB	100	99.406	Callithrix_jacchus
ENSVPAG00000005375	RTCB	100	99.604	ENSCAFG00000001785	RTCB	100	99.604	Canis_familiaris
ENSVPAG00000005375	RTCB	100	95.248	ENSCAFG00000010789	-	100	95.248	Canis_familiaris
ENSVPAG00000005375	RTCB	100	99.604	ENSCAFG00020004890	-	100	99.604	Canis_lupus_dingo
ENSVPAG00000005375	RTCB	87	96.136	ENSCAFG00020018953	-	99	96.136	Canis_lupus_dingo
ENSVPAG00000005375	RTCB	100	99.604	ENSCHIG00000027009	-	100	99.604	Capra_hircus
ENSVPAG00000005375	RTCB	100	99.010	ENSTSYG00000012320	RTCB	100	99.010	Carlito_syrichta
ENSVPAG00000005375	RTCB	94	98.952	ENSCAPG00000011647	RTCB	96	98.952	Cavia_aperea
ENSVPAG00000005375	RTCB	100	99.406	ENSCCAG00000000618	RTCB	100	99.406	Cebus_capucinus
ENSVPAG00000005375	RTCB	100	99.406	ENSCATG00000033424	RTCB	100	99.406	Cercocebus_atys
ENSVPAG00000005375	RTCB	100	99.208	ENSCLAG00000007997	RTCB	100	99.208	Chinchilla_lanigera
ENSVPAG00000005375	RTCB	100	99.208	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
ENSVPAG00000005375	RTCB	100	84.950	ENSCHOG00000009123	RTCB	100	84.950	Choloepus_hoffmanni
ENSVPAG00000005375	RTCB	100	96.436	ENSCPBG00000023184	RTCB	100	96.436	Chrysemys_picta_bellii
ENSVPAG00000005375	RTCB	100	81.584	ENSCING00000003830	-	100	81.584	Ciona_intestinalis
ENSVPAG00000005375	RTCB	100	81.980	ENSCSAVG00000008124	-	99	81.980	Ciona_savignyi
ENSVPAG00000005375	RTCB	100	95.644	ENSCANG00000001891	RTCB	100	95.644	Colobus_angolensis_palliatus
ENSVPAG00000005375	RTCB	100	99.208	ENSCGRG00001011173	Rtcb	100	99.208	Cricetulus_griseus_chok1gshd
ENSVPAG00000005375	RTCB	93	99.363	ENSCGRG00000009587	-	96	99.363	Cricetulus_griseus_crigri
ENSVPAG00000005375	RTCB	100	93.663	ENSCSEG00000003986	rtcb	100	93.663	Cynoglossus_semilaevis
ENSVPAG00000005375	RTCB	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSVPAG00000005375	RTCB	100	93.861	ENSDARG00000101047	rtcb	100	93.861	Danio_rerio
ENSVPAG00000005375	RTCB	80	96.806	ENSDNOG00000012425	RTCB	99	96.806	Dasypus_novemcinctus
ENSVPAG00000005375	RTCB	100	98.812	ENSDORG00000010855	Rtcb	100	98.812	Dipodomys_ordii
ENSVPAG00000005375	RTCB	99	85.487	FBgn0032781	RtcB	99	85.487	Drosophila_melanogaster
ENSVPAG00000005375	RTCB	100	92.475	ENSETEG00000001988	RTCB	100	92.475	Echinops_telfairi
ENSVPAG00000005375	RTCB	100	85.545	ENSEBUG00000014235	rtcb	100	85.545	Eptatretus_burgeri
ENSVPAG00000005375	RTCB	100	99.604	ENSEASG00005019059	RTCB	100	99.604	Equus_asinus_asinus
ENSVPAG00000005375	RTCB	100	99.604	ENSECAG00000023998	RTCB	100	99.604	Equus_caballus
ENSVPAG00000005375	RTCB	89	89.933	ENSEEUG00000006251	RTCB	100	89.933	Erinaceus_europaeus
ENSVPAG00000005375	RTCB	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSVPAG00000005375	RTCB	100	99.802	ENSFCAG00000026480	RTCB	100	99.802	Felis_catus
ENSVPAG00000005375	RTCB	100	97.426	ENSFALG00000013334	RTCB	100	97.426	Ficedula_albicollis
ENSVPAG00000005375	RTCB	100	99.604	ENSFDAG00000018150	RTCB	100	99.604	Fukomys_damarensis
ENSVPAG00000005375	RTCB	100	94.257	ENSFHEG00000009595	rtcb	100	94.257	Fundulus_heteroclitus
ENSVPAG00000005375	RTCB	100	91.683	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSVPAG00000005375	RTCB	100	97.228	ENSGALG00000012611	RTCB	100	97.228	Gallus_gallus
ENSVPAG00000005375	RTCB	100	94.653	ENSGAFG00000004198	rtcb	100	94.653	Gambusia_affinis
ENSVPAG00000005375	RTCB	100	93.663	ENSGACG00000000586	rtcb	100	93.663	Gasterosteus_aculeatus
ENSVPAG00000005375	RTCB	93	95.957	ENSGAGG00000019133	RTCB	98	95.957	Gopherus_agassizii
ENSVPAG00000005375	RTCB	100	99.802	ENSGGOG00000011402	RTCB	100	99.802	Gorilla_gorilla
ENSVPAG00000005375	RTCB	100	93.069	ENSHBUG00000020571	rtcb	100	93.069	Haplochromis_burtoni
ENSVPAG00000005375	RTCB	100	99.604	ENSHGLG00000004492	RTCB	100	99.604	Heterocephalus_glaber_female
ENSVPAG00000005375	RTCB	93	70.339	ENSHGLG00000001066	-	99	70.339	Heterocephalus_glaber_female
ENSVPAG00000005375	RTCB	100	99.604	ENSHGLG00100008965	RTCB	100	99.604	Heterocephalus_glaber_male
ENSVPAG00000005375	RTCB	100	91.321	ENSHCOG00000006450	rtcb	100	91.321	Hippocampus_comes
ENSVPAG00000005375	RTCB	100	94.455	ENSIPUG00000015443	rtcb	100	94.455	Ictalurus_punctatus
ENSVPAG00000005375	RTCB	100	99.406	ENSSTOG00000003878	RTCB	100	99.406	Ictidomys_tridecemlineatus
ENSVPAG00000005375	RTCB	100	98.812	ENSJJAG00000010667	Rtcb	100	98.812	Jaculus_jaculus
ENSVPAG00000005375	RTCB	100	94.257	ENSKMAG00000013178	rtcb	100	94.257	Kryptolebias_marmoratus
ENSVPAG00000005375	RTCB	100	93.465	ENSLBEG00000000214	rtcb	100	93.465	Labrus_bergylta
ENSVPAG00000005375	RTCB	100	94.455	ENSLBEG00000010566	RTCB	100	94.455	Labrus_bergylta
ENSVPAG00000005375	RTCB	100	95.248	ENSLACG00000013033	RTCB	100	95.248	Latimeria_chalumnae
ENSVPAG00000005375	RTCB	100	94.455	ENSLOCG00000016515	rtcb	99	94.455	Lepisosteus_oculatus
ENSVPAG00000005375	RTCB	100	99.010	ENSLAFG00000002082	RTCB	100	99.010	Loxodonta_africana
ENSVPAG00000005375	RTCB	100	99.208	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
ENSVPAG00000005375	RTCB	100	99.208	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
ENSVPAG00000005375	RTCB	100	99.208	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
ENSVPAG00000005375	RTCB	100	99.406	ENSMLEG00000040505	RTCB	100	99.406	Mandrillus_leucophaeus
ENSVPAG00000005375	RTCB	100	94.257	ENSMAMG00000020676	rtcb	100	94.257	Mastacembelus_armatus
ENSVPAG00000005375	RTCB	100	93.069	ENSMZEG00005018942	rtcb	100	93.069	Maylandia_zebra
ENSVPAG00000005375	RTCB	100	96.844	ENSMGAG00000012805	RTCB	100	96.844	Meleagris_gallopavo
ENSVPAG00000005375	RTCB	60	99.468	ENSMAUG00000008301	Rtcb	100	99.468	Mesocricetus_auratus
ENSVPAG00000005375	RTCB	100	80.000	ENSMICG00000036677	-	100	80.000	Microcebus_murinus
ENSVPAG00000005375	RTCB	100	99.604	ENSMICG00000013303	-	100	99.604	Microcebus_murinus
ENSVPAG00000005375	RTCB	100	99.208	ENSMOCG00000002440	Rtcb	100	99.208	Microtus_ochrogaster
ENSVPAG00000005375	RTCB	100	94.257	ENSMMOG00000005987	rtcb	100	94.257	Mola_mola
ENSVPAG00000005375	RTCB	100	98.218	ENSMODG00000001414	RTCB	100	98.218	Monodelphis_domestica
ENSVPAG00000005375	RTCB	100	94.455	ENSMALG00000007603	rtcb	100	94.455	Monopterus_albus
ENSVPAG00000005375	RTCB	100	99.208	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.208	Mus_caroli
ENSVPAG00000005375	RTCB	100	99.208	ENSMUSG00000001783	Rtcb	100	99.208	Mus_musculus
ENSVPAG00000005375	RTCB	100	99.208	MGP_PahariEiJ_G0031396	Rtcb	100	99.208	Mus_pahari
ENSVPAG00000005375	RTCB	100	99.208	MGP_SPRETEiJ_G0016507	Rtcb	100	99.208	Mus_spretus
ENSVPAG00000005375	RTCB	100	99.604	ENSMPUG00000012285	RTCB	100	99.604	Mustela_putorius_furo
ENSVPAG00000005375	RTCB	100	96.844	ENSMLUG00000007803	RTCB	100	96.844	Myotis_lucifugus
ENSVPAG00000005375	RTCB	75	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSVPAG00000005375	RTCB	100	93.267	ENSNBRG00000017202	rtcb	100	93.267	Neolamprologus_brichardi
ENSVPAG00000005375	RTCB	100	99.802	ENSNLEG00000004960	RTCB	100	99.802	Nomascus_leucogenys
ENSVPAG00000005375	RTCB	100	72.871	ENSMEUG00000007809	-	100	72.871	Notamacropus_eugenii
ENSVPAG00000005375	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSVPAG00000005375	RTCB	100	65.545	ENSODEG00000005042	-	100	65.545	Octodon_degus
ENSVPAG00000005375	RTCB	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSVPAG00000005375	RTCB	100	94.257	ENSONIG00000007474	rtcb	100	94.257	Oreochromis_niloticus
ENSVPAG00000005375	RTCB	100	98.218	ENSOANG00000005524	RTCB	100	98.218	Ornithorhynchus_anatinus
ENSVPAG00000005375	RTCB	93	99.574	ENSOCUG00000008270	RTCB	96	99.574	Oryctolagus_cuniculus
ENSVPAG00000005375	RTCB	100	93.663	ENSORLG00000020093	rtcb	100	93.663	Oryzias_latipes
ENSVPAG00000005375	RTCB	100	93.663	ENSORLG00020003706	rtcb	100	93.663	Oryzias_latipes_hni
ENSVPAG00000005375	RTCB	100	93.861	ENSORLG00015002968	rtcb	100	93.861	Oryzias_latipes_hsok
ENSVPAG00000005375	RTCB	100	93.465	ENSOMEG00000021278	rtcb	100	93.465	Oryzias_melastigma
ENSVPAG00000005375	RTCB	100	99.010	ENSOGAG00000001425	RTCB	100	99.010	Otolemur_garnettii
ENSVPAG00000005375	RTCB	100	99.604	ENSOARG00000018008	RTCB	100	99.604	Ovis_aries
ENSVPAG00000005375	RTCB	100	99.802	ENSPPAG00000028667	RTCB	100	99.802	Pan_paniscus
ENSVPAG00000005375	RTCB	100	99.802	ENSPPRG00000004038	RTCB	100	99.802	Panthera_pardus
ENSVPAG00000005375	RTCB	94	96.211	ENSPTIG00000020499	RTCB	97	96.211	Panthera_tigris_altaica
ENSVPAG00000005375	RTCB	100	99.802	ENSPTRG00000014287	RTCB	100	99.802	Pan_troglodytes
ENSVPAG00000005375	RTCB	100	99.208	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
ENSVPAG00000005375	RTCB	100	92.871	ENSPKIG00000001881	rtcb	100	92.871	Paramormyrops_kingsleyae
ENSVPAG00000005375	RTCB	91	97.826	ENSPSIG00000011690	RTCB	100	97.826	Pelodiscus_sinensis
ENSVPAG00000005375	RTCB	100	94.455	ENSPMGG00000016672	rtcb	100	94.455	Periophthalmus_magnuspinnatus
ENSVPAG00000005375	RTCB	100	99.208	ENSPEMG00000019548	Rtcb	100	99.208	Peromyscus_maniculatus_bairdii
ENSVPAG00000005375	RTCB	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSVPAG00000005375	RTCB	100	98.614	ENSPCIG00000009467	RTCB	100	98.614	Phascolarctos_cinereus
ENSVPAG00000005375	RTCB	100	95.050	ENSPFOG00000003058	rtcb	100	95.050	Poecilia_formosa
ENSVPAG00000005375	RTCB	100	94.851	ENSPLAG00000017663	rtcb	100	94.851	Poecilia_latipinna
ENSVPAG00000005375	RTCB	100	95.050	ENSPMEG00000006227	rtcb	100	95.050	Poecilia_mexicana
ENSVPAG00000005375	RTCB	100	94.653	ENSPREG00000018467	rtcb	100	94.653	Poecilia_reticulata
ENSVPAG00000005375	RTCB	100	99.802	ENSPPYG00000011752	RTCB	100	99.802	Pongo_abelii
ENSVPAG00000005375	RTCB	93	81.356	ENSPCAG00000013641	RTCB	100	81.356	Procavia_capensis
ENSVPAG00000005375	RTCB	100	99.406	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
ENSVPAG00000005375	RTCB	93	98.936	ENSPVAG00000002380	RTCB	100	98.936	Pteropus_vampyrus
ENSVPAG00000005375	RTCB	100	93.069	ENSPNYG00000022760	rtcb	100	93.069	Pundamilia_nyererei
ENSVPAG00000005375	RTCB	100	95.050	ENSPNAG00000009209	rtcb	100	95.050	Pygocentrus_nattereri
ENSVPAG00000005375	RTCB	100	99.208	ENSRNOG00000004813	Rtcb	100	99.208	Rattus_norvegicus
ENSVPAG00000005375	RTCB	100	90.514	ENSRBIG00000042090	RTCB	100	90.514	Rhinopithecus_bieti
ENSVPAG00000005375	RTCB	100	94.653	ENSSBOG00000020085	-	100	94.653	Saimiri_boliviensis_boliviensis
ENSVPAG00000005375	RTCB	94	99.367	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
ENSVPAG00000005375	RTCB	100	92.871	ENSSFOG00015000763	rtcb	100	92.871	Scleropages_formosus
ENSVPAG00000005375	RTCB	100	93.663	ENSSFOG00015011572	RTCB	100	93.663	Scleropages_formosus
ENSVPAG00000005375	RTCB	100	90.495	ENSSMAG00000005096	rtcb	100	90.495	Scophthalmus_maximus
ENSVPAG00000005375	RTCB	100	93.663	ENSSDUG00000012605	rtcb	100	93.663	Seriola_dumerili
ENSVPAG00000005375	RTCB	100	93.663	ENSSLDG00000019458	rtcb	100	93.663	Seriola_lalandi_dorsalis
ENSVPAG00000005375	RTCB	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSVPAG00000005375	RTCB	100	96.040	ENSSPUG00000012814	RTCB	100	96.040	Sphenodon_punctatus
ENSVPAG00000005375	RTCB	100	94.653	ENSSPAG00000004623	rtcb	100	94.653	Stegastes_partitus
ENSVPAG00000005375	RTCB	100	99.802	ENSSSCG00000000158	RTCB	100	99.802	Sus_scrofa
ENSVPAG00000005375	RTCB	100	97.426	ENSTGUG00000010947	RTCB	99	97.426	Taeniopygia_guttata
ENSVPAG00000005375	RTCB	91	95.217	ENSTRUG00000009880	rtcb	100	95.217	Takifugu_rubripes
ENSVPAG00000005375	RTCB	100	93.267	ENSTNIG00000002484	rtcb	100	93.267	Tetraodon_nigroviridis
ENSVPAG00000005375	RTCB	100	85.941	ENSTBEG00000004418	RTCB	100	85.941	Tupaia_belangeri
ENSVPAG00000005375	RTCB	93	98.936	ENSTTRG00000006417	RTCB	100	98.936	Tursiops_truncatus
ENSVPAG00000005375	RTCB	100	99.604	ENSUAMG00000022792	RTCB	100	99.604	Ursus_americanus
ENSVPAG00000005375	RTCB	100	99.604	ENSUMAG00000017225	RTCB	100	99.604	Ursus_maritimus
ENSVPAG00000005375	RTCB	100	99.604	ENSVVUG00000023408	RTCB	100	99.604	Vulpes_vulpes
ENSVPAG00000005375	RTCB	100	94.455	ENSXETG00000011523	rtcb	100	94.455	Xenopus_tropicalis
ENSVPAG00000005375	RTCB	100	94.653	ENSXMAG00000002855	rtcb	100	94.653	Xiphophorus_maculatus