EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000005413 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 12231 bases
Position: chrGeneScaffold_1960:6-12236
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005029	zf-met	PF12874.7	4.4e-05	1	1
ENSVPAP00000005029	PAP_assoc	PF03828.19	1.5e-05	1	1
ENSVPAP00000005029	RRM_1	PF00076.22	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005414	-	2010	-	ENSVPAP00000005029	670 (aa)	-	UPI00018BCD33

Gene Model

Click here to download ENSVPAG00000005413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005413's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005413	-	100	89.153	ENSG00000149016	TUT1	100	95.699	Homo_sapiens
ENSVPAG00000005413	-	73	47.273	ENSAPOG00000016423	tut1	60	47.388	Acanthochromis_polyacanthus
ENSVPAG00000005413	-	100	87.964	ENSAMEG00000006723	-	77	88.707	Ailuropoda_melanoleuca
ENSVPAG00000005413	-	75	48.069	ENSACIG00000000948	tut1	60	48.339	Amphilophus_citrinellus
ENSVPAG00000005413	-	73	47.826	ENSAOCG00000021912	tut1	60	47.955	Amphiprion_ocellaris
ENSVPAG00000005413	-	73	47.826	ENSAPEG00000005144	tut1	62	47.955	Amphiprion_percula
ENSVPAG00000005413	-	73	46.570	ENSATEG00000014590	tut1	60	46.840	Anabas_testudineus
ENSVPAG00000005413	-	100	88.559	ENSANAG00000029063	-	77	88.559	Aotus_nancymaae
ENSVPAG00000005413	-	76	47.964	ENSACLG00000013406	tut1	65	46.009	Astatotilapia_calliptera
ENSVPAG00000005413	-	73	46.570	ENSAMXG00000042139	tut1	61	46.919	Astyanax_mexicanus
ENSVPAG00000005413	-	100	88.856	ENSBTAG00000011846	TUT1	77	88.856	Bos_taurus
ENSVPAG00000005413	-	100	87.964	ENSCJAG00000033294	-	95	87.891	Callithrix_jacchus
ENSVPAG00000005413	-	100	87.667	ENSCAFG00000015822	TUT1	77	88.707	Canis_familiaris
ENSVPAG00000005413	-	100	87.667	ENSCAFG00020013039	-	77	88.707	Canis_lupus_dingo
ENSVPAG00000005413	-	99	89.137	ENSCHIG00000006765	-	77	89.137	Capra_hircus
ENSVPAG00000005413	-	100	82.615	ENSTSYG00000000147	-	74	82.615	Carlito_syrichta
ENSVPAG00000005413	-	96	80.000	ENSCAPG00000013001	-	93	80.000	Cavia_aperea
ENSVPAG00000005413	-	100	80.386	ENSCPOG00000014281	-	79	80.386	Cavia_porcellus
ENSVPAG00000005413	-	100	88.559	ENSCCAG00000018819	-	74	88.559	Cebus_capucinus
ENSVPAG00000005413	-	100	89.450	ENSCATG00000036770	-	74	89.450	Cercocebus_atys
ENSVPAG00000005413	-	100	79.495	ENSCLAG00000000215	-	79	79.495	Chinchilla_lanigera
ENSVPAG00000005413	-	87	88.586	ENSCSAG00000006566	-	75	88.586	Chlorocebus_sabaeus
ENSVPAG00000005413	-	74	59.664	ENSCPBG00000017909	-	61	60.648	Chrysemys_picta_bellii
ENSVPAG00000005413	-	100	89.004	ENSCANG00000043244	-	73	89.004	Colobus_angolensis_palliatus
ENSVPAG00000005413	-	100	77.663	ENSCGRG00001017583	Tut1	78	77.663	Cricetulus_griseus_chok1gshd
ENSVPAG00000005413	-	100	77.663	ENSCGRG00000015008	Tut1	78	77.663	Cricetulus_griseus_crigri
ENSVPAG00000005413	-	73	47.464	ENSCSEG00000012807	tut1	61	47.212	Cynoglossus_semilaevis
ENSVPAG00000005413	-	75	47.535	ENSCVAG00000005396	tut1	61	48.120	Cyprinodon_variegatus
ENSVPAG00000005413	-	74	48.305	ENSDARG00000057321	tut1	61	48.598	Danio_rerio
ENSVPAG00000005413	-	100	88.113	ENSDNOG00000038908	-	78	88.113	Dasypus_novemcinctus
ENSVPAG00000005413	-	100	86.012	ENSDORG00000004018	Tut1	76	86.012	Dipodomys_ordii
ENSVPAG00000005413	-	90	42.182	ENSEBUG00000014170	tut1	63	43.243	Eptatretus_burgeri
ENSVPAG00000005413	-	100	90.342	ENSEASG00005007531	-	77	90.342	Equus_asinus_asinus
ENSVPAG00000005413	-	100	90.788	ENSECAG00000009471	-	76	90.788	Equus_caballus
ENSVPAG00000005413	-	100	80.981	ENSEEUG00000001238	-	78	80.981	Erinaceus_europaeus
ENSVPAG00000005413	-	90	41.262	ENSELUG00000011532	tut1	60	47.925	Esox_lucius
ENSVPAG00000005413	-	100	87.982	ENSFCAG00000008859	-	74	88.724	Felis_catus
ENSVPAG00000005413	-	99	77.946	ENSFDAG00000021131	-	83	77.979	Fukomys_damarensis
ENSVPAG00000005413	-	79	47.210	ENSFHEG00000006279	tut1	60	47.584	Fundulus_heteroclitus
ENSVPAG00000005413	-	81	46.032	ENSGMOG00000013378	tut1	61	50.570	Gadus_morhua
ENSVPAG00000005413	-	77	44.811	ENSGACG00000009956	tut1	65	45.246	Gasterosteus_aculeatus
ENSVPAG00000005413	-	94	48.452	ENSGAGG00000007912	-	71	49.073	Gopherus_agassizii
ENSVPAG00000005413	-	100	88.707	ENSGGOG00000013564	-	93	87.010	Gorilla_gorilla
ENSVPAG00000005413	-	76	47.511	ENSHBUG00000022855	tut1	65	45.540	Haplochromis_burtoni
ENSVPAG00000005413	-	99	80.723	ENSHGLG00000002742	-	78	80.723	Heterocephalus_glaber_female
ENSVPAG00000005413	-	99	80.723	ENSHGLG00100017588	-	78	80.723	Heterocephalus_glaber_male
ENSVPAG00000005413	-	89	40.325	ENSHCOG00000016358	tut1	64	45.875	Hippocampus_comes
ENSVPAG00000005413	-	78	49.554	ENSIPUG00000017671	tut1	63	48.598	Ictalurus_punctatus
ENSVPAG00000005413	-	100	86.627	ENSSTOG00000002859	-	77	86.627	Ictidomys_tridecemlineatus
ENSVPAG00000005413	-	99	86.607	ENSJJAG00000022329	Tut1	78	86.607	Jaculus_jaculus
ENSVPAG00000005413	-	88	39.869	ENSKMAG00000010023	tut1	60	47.212	Kryptolebias_marmoratus
ENSVPAG00000005413	-	75	44.369	ENSLBEG00000014969	tut1	61	45.725	Labrus_bergylta
ENSVPAG00000005413	-	88	43.645	ENSLACG00000011278	tut1	69	43.750	Latimeria_chalumnae
ENSVPAG00000005413	-	73	50.929	ENSLOCG00000013105	tut1	59	51.908	Lepisosteus_oculatus
ENSVPAG00000005413	-	100	88.262	ENSLAFG00000003340	-	77	88.262	Loxodonta_africana
ENSVPAG00000005413	-	100	89.153	ENSMFAG00000000912	-	74	89.153	Macaca_fascicularis
ENSVPAG00000005413	-	100	88.856	ENSMMUG00000006595	-	100	80.769	Macaca_mulatta
ENSVPAG00000005413	-	100	89.153	ENSMNEG00000029841	-	74	89.153	Macaca_nemestrina
ENSVPAG00000005413	-	100	89.153	ENSMLEG00000040498	-	74	89.153	Mandrillus_leucophaeus
ENSVPAG00000005413	-	75	47.099	ENSMAMG00000008173	tut1	60	49.071	Mastacembelus_armatus
ENSVPAG00000005413	-	76	47.964	ENSMZEG00005009777	tut1	65	46.009	Maylandia_zebra
ENSVPAG00000005413	-	87	82.278	ENSMAUG00000012453	Tut1	75	81.250	Mesocricetus_auratus
ENSVPAG00000005413	-	100	87.519	ENSMICG00000009841	-	74	87.519	Microcebus_murinus
ENSVPAG00000005413	-	100	79.142	ENSMOCG00000015834	Tut1	78	79.142	Microtus_ochrogaster
ENSVPAG00000005413	-	73	49.091	ENSMMOG00000002589	tut1	60	48.881	Mola_mola
ENSVPAG00000005413	-	98	75.380	ENSMODG00000007710	-	77	74.663	Monodelphis_domestica
ENSVPAG00000005413	-	72	48.261	ENSMALG00000003624	tut1	60	47.407	Monopterus_albus
ENSVPAG00000005413	-	100	77.415	MGP_CAROLIEiJ_G0022670	Tut1	78	77.563	Mus_caroli
ENSVPAG00000005413	-	100	77.991	ENSMUSG00000071645	Tut1	78	77.991	Mus_musculus
ENSVPAG00000005413	-	100	78.994	MGP_PahariEiJ_G0014164	Tut1	78	78.994	Mus_pahari
ENSVPAG00000005413	-	100	78.287	MGP_SPRETEiJ_G0023583	Tut1	78	78.287	Mus_spretus
ENSVPAG00000005413	-	100	87.649	ENSMPUG00000013938	-	77	88.542	Mustela_putorius_furo
ENSVPAG00000005413	-	100	71.662	ENSMLUG00000000349	-	77	71.662	Myotis_lucifugus
ENSVPAG00000005413	-	100	84.638	ENSNGAG00000002988	Tut1	78	84.638	Nannospalax_galili
ENSVPAG00000005413	-	76	48.416	ENSNBRG00000022055	tut1	65	46.479	Neolamprologus_brichardi
ENSVPAG00000005413	-	100	88.707	ENSNLEG00000003780	-	93	86.804	Nomascus_leucogenys
ENSVPAG00000005413	-	89	78.723	ENSMEUG00000012756	-	71	78.723	Notamacropus_eugenii
ENSVPAG00000005413	-	83	84.173	ENSOPRG00000011835	-	71	83.273	Ochotona_princeps
ENSVPAG00000005413	-	100	77.712	ENSODEG00000002204	-	80	77.712	Octodon_degus
ENSVPAG00000005413	-	78	47.414	ENSONIG00000019913	tut1	65	47.170	Oreochromis_niloticus
ENSVPAG00000005413	-	71	72.689	ENSOANG00000012458	-	94	72.689	Ornithorhynchus_anatinus
ENSVPAG00000005413	-	100	84.571	ENSOCUG00000017215	-	77	84.571	Oryctolagus_cuniculus
ENSVPAG00000005413	-	75	46.154	ENSORLG00000004342	tut1	60	47.547	Oryzias_latipes
ENSVPAG00000005413	-	75	46.503	ENSORLG00015018834	tut1	60	47.925	Oryzias_latipes_hsok
ENSVPAG00000005413	-	75	47.203	ENSOMEG00000005129	tut1	61	48.679	Oryzias_melastigma
ENSVPAG00000005413	-	100	87.519	ENSOGAG00000000828	-	78	87.519	Otolemur_garnettii
ENSVPAG00000005413	-	99	84.844	ENSOARG00000015269	-	76	84.844	Ovis_aries
ENSVPAG00000005413	-	100	89.153	ENSPPAG00000037200	-	93	86.804	Pan_paniscus
ENSVPAG00000005413	-	100	87.982	ENSPPRG00000000257	-	77	88.724	Panthera_pardus
ENSVPAG00000005413	-	100	88.131	ENSPTIG00000017573	-	74	88.872	Panthera_tigris_altaica
ENSVPAG00000005413	-	100	89.302	ENSPTRG00000003770	TUT1	93	87.010	Pan_troglodytes
ENSVPAG00000005413	-	100	85.290	ENSPANG00000010908	-	80	85.290	Papio_anubis
ENSVPAG00000005413	-	78	48.718	ENSPKIG00000022062	tut1	63	48.598	Paramormyrops_kingsleyae
ENSVPAG00000005413	-	92	50.391	ENSPSIG00000004972	-	67	51.591	Pelodiscus_sinensis
ENSVPAG00000005413	-	73	49.612	ENSPMGG00000004299	tut1	59	49.402	Periophthalmus_magnuspinnatus
ENSVPAG00000005413	-	99	79.460	ENSPEMG00000018332	Tut1	78	78.994	Peromyscus_maniculatus_bairdii
ENSVPAG00000005413	-	63	47.586	ENSPMAG00000005825	tut1	56	47.887	Petromyzon_marinus
ENSVPAG00000005413	-	99	74.146	ENSPCIG00000017805	-	79	74.443	Phascolarctos_cinereus
ENSVPAG00000005413	-	73	47.601	ENSPFOG00000016195	tut1	61	47.348	Poecilia_formosa
ENSVPAG00000005413	-	73	47.601	ENSPLAG00000022064	tut1	61	47.348	Poecilia_latipinna
ENSVPAG00000005413	-	73	47.970	ENSPMEG00000019175	tut1	61	47.727	Poecilia_mexicana
ENSVPAG00000005413	-	78	45.064	ENSPREG00000020464	tut1	66	44.601	Poecilia_reticulata
ENSVPAG00000005413	-	100	89.004	ENSPPYG00000003162	-	77	89.004	Pongo_abelii
ENSVPAG00000005413	-	96	85.559	ENSPCAG00000002956	-	76	85.559	Procavia_capensis
ENSVPAG00000005413	-	100	86.217	ENSPCOG00000017464	-	75	86.070	Propithecus_coquereli
ENSVPAG00000005413	-	79	85.294	ENSPVAG00000003444	-	61	85.294	Pteropus_vampyrus
ENSVPAG00000005413	-	76	47.059	ENSPNYG00000018764	tut1	65	45.070	Pundamilia_nyererei
ENSVPAG00000005413	-	71	50.228	ENSPNAG00000011889	tut1	61	48.815	Pygocentrus_nattereri
ENSVPAG00000005413	-	100	78.994	ENSRNOG00000020047	Tut1	78	78.994	Rattus_norvegicus
ENSVPAG00000005413	-	100	89.004	ENSRBIG00000021240	-	92	88.494	Rhinopithecus_bieti
ENSVPAG00000005413	-	100	89.004	ENSRROG00000043315	-	92	88.494	Rhinopithecus_roxellana
ENSVPAG00000005413	-	100	88.113	ENSSBOG00000003827	-	77	88.113	Saimiri_boliviensis_boliviensis
ENSVPAG00000005413	-	96	75.194	ENSSHAG00000003368	-	76	75.194	Sarcophilus_harrisii
ENSVPAG00000005413	-	80	52.466	ENSSFOG00015005639	tut1	62	51.174	Scleropages_formosus
ENSVPAG00000005413	-	88	38.898	ENSSMAG00000011449	tut1	60	48.327	Scophthalmus_maximus
ENSVPAG00000005413	-	70	46.739	ENSSDUG00000003613	tut1	60	46.840	Seriola_dumerili
ENSVPAG00000005413	-	70	46.739	ENSSLDG00000022487	tut1	60	46.840	Seriola_lalandi_dorsalis
ENSVPAG00000005413	-	84	54.132	ENSSPUG00000008143	-	58	58.039	Sphenodon_punctatus
ENSVPAG00000005413	-	73	48.551	ENSSPAG00000023390	tut1	60	48.699	Stegastes_partitus
ENSVPAG00000005413	-	87	87.934	ENSSSCG00000013063	-	73	87.934	Sus_scrofa
ENSVPAG00000005413	-	71	50.000	ENSTRUG00000016451	tut1	59	49.814	Takifugu_rubripes
ENSVPAG00000005413	-	94	41.304	ENSTNIG00000012852	tut1	92	42.308	Tetraodon_nigroviridis
ENSVPAG00000005413	-	100	89.153	ENSTTRG00000002460	-	77	89.153	Tursiops_truncatus
ENSVPAG00000005413	-	100	87.964	ENSUAMG00000027237	-	77	88.856	Ursus_americanus
ENSVPAG00000005413	-	100	87.964	ENSUMAG00000012710	-	77	88.856	Ursus_maritimus
ENSVPAG00000005413	-	100	87.667	ENSVVUG00000029882	-	77	88.707	Vulpes_vulpes
ENSVPAG00000005413	-	77	50.000	ENSXETG00000005640	tut1	67	43.464	Xenopus_tropicalis
ENSVPAG00000005413	-	67	40.042	ENSXCOG00000017824	tut1	77	61.207	Xiphophorus_couchianus
ENSVPAG00000005413	-	73	48.529	ENSXMAG00000027272	tut1	61	48.302	Xiphophorus_maculatus