EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000005541 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 7326 bases
Position: chrGeneScaffold_396:375791-383116
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005150	PRP38	PF03371.15	1.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005542	-	1623	-	ENSVPAP00000005150	540 (aa)	-	UPI00018BE347

Gene Model

Click here to download ENSVPAG00000005541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005541's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005541	-	92	53.452	ENSATEG00000014482	-	59	69.708	Anabas_testudineus
ENSVPAG00000005541	-	99	88.930	ENSBTAG00000047874	PRPF38B	99	88.376	Bos_taurus
ENSVPAG00000005541	-	99	81.284	ENSCAFG00020010992	-	99	81.284	Canis_lupus_dingo
ENSVPAG00000005541	-	99	88.930	ENSCHIG00000024357	-	99	88.376	Capra_hircus
ENSVPAG00000005541	-	80	93.533	ENSCAPG00000009606	-	98	93.795	Cavia_aperea
ENSVPAG00000005541	-	99	87.454	ENSCPOG00000039545	-	99	86.900	Cavia_porcellus
ENSVPAG00000005541	-	99	87.706	ENSCLAG00000005801	-	99	87.706	Chinchilla_lanigera
ENSVPAG00000005541	-	61	82.477	ENSCHOG00000008972	-	62	77.682	Choloepus_hoffmanni
ENSVPAG00000005541	-	94	83.008	ENSCPBG00000028299	-	93	82.643	Chrysemys_picta_bellii
ENSVPAG00000005541	-	90	52.929	ENSCSEG00000015030	-	57	68.679	Cynoglossus_semilaevis
ENSVPAG00000005541	-	82	83.259	ENSETEG00000014690	-	72	81.734	Echinops_telfairi
ENSVPAG00000005541	-	84	86.755	ENSFALG00000002673	-	88	88.079	Ficedula_albicollis
ENSVPAG00000005541	-	93	51.625	ENSGMOG00000012080	-	59	68.727	Gadus_morhua
ENSVPAG00000005541	-	99	79.053	ENSGALG00000001972	-	93	81.729	Gallus_gallus
ENSVPAG00000005541	-	81	54.367	ENSGAFG00000008943	-	57	72.453	Gambusia_affinis
ENSVPAG00000005541	-	94	83.203	ENSGAGG00000001563	-	93	82.840	Gopherus_agassizii
ENSVPAG00000005541	-	99	88.257	ENSHGLG00000016583	PRPF38B	99	88.440	Heterocephalus_glaber_female
ENSVPAG00000005541	-	99	88.073	ENSHGLG00100015525	-	99	88.257	Heterocephalus_glaber_male
ENSVPAG00000005541	-	90	51.904	ENSKMAG00000005540	-	56	68.939	Kryptolebias_marmoratus
ENSVPAG00000005541	-	97	67.029	ENSLACG00000015511	-	50	76.866	Latimeria_chalumnae
ENSVPAG00000005541	-	99	82.472	ENSMOCG00000020285	-	99	82.841	Microtus_ochrogaster
ENSVPAG00000005541	-	75	54.005	ENSMMOG00000011639	-	59	68.613	Mola_mola
ENSVPAG00000005541	-	59	82.927	ENSMODG00000002350	-	100	84.722	Monodelphis_domestica
ENSVPAG00000005541	-	91	54.331	ENSMALG00000019479	-	59	69.708	Monopterus_albus
ENSVPAG00000005541	-	79	93.801	ENSOPRG00000013543	-	69	93.801	Ochotona_princeps
ENSVPAG00000005541	-	81	56.739	ENSONIG00000010129	-	57	71.429	Oreochromis_niloticus
ENSVPAG00000005541	-	90	85.882	ENSOANG00000007343	-	91	83.838	Ornithorhynchus_anatinus
ENSVPAG00000005541	-	84	55.032	ENSORLG00000015621	-	83	69.231	Oryzias_latipes
ENSVPAG00000005541	-	84	55.032	ENSORLG00020016276	-	82	69.231	Oryzias_latipes_hni
ENSVPAG00000005541	-	92	54.743	ENSORLG00015016270	-	69	69.231	Oryzias_latipes_hsok
ENSVPAG00000005541	-	84	55.246	ENSOMEG00000022050	-	85	68.966	Oryzias_melastigma
ENSVPAG00000005541	-	99	86.789	ENSOGAG00000027048	-	99	86.972	Otolemur_garnettii
ENSVPAG00000005541	-	99	87.985	ENSOARG00000018899	-	99	87.061	Ovis_aries
ENSVPAG00000005541	-	97	55.037	ENSPKIG00000004815	-	57	68.212	Paramormyrops_kingsleyae
ENSVPAG00000005541	-	94	82.617	ENSPSIG00000016569	-	93	82.249	Pelodiscus_sinensis
ENSVPAG00000005541	-	81	55.044	ENSPFOG00000004025	-	76	69.930	Poecilia_formosa
ENSVPAG00000005541	-	81	55.044	ENSPLAG00000019842	-	57	72.830	Poecilia_latipinna
ENSVPAG00000005541	-	69	60.743	ENSPMEG00000004807	-	63	61.873	Poecilia_mexicana
ENSVPAG00000005541	-	81	54.367	ENSPREG00000015599	-	78	69.930	Poecilia_reticulata
ENSVPAG00000005541	-	51	69.892	ENSPNAG00000017484	-	53	70.182	Pygocentrus_nattereri
ENSVPAG00000005541	-	99	83.088	ENSRNOG00000020438	Prpf38b	99	82.537	Rattus_norvegicus
ENSVPAG00000005541	-	94	54.383	ENSSFOG00015011251	-	74	72.028	Scleropages_formosus
ENSVPAG00000005541	-	84	55.252	ENSSLDG00000023487	-	78	69.231	Seriola_lalandi_dorsalis
ENSVPAG00000005541	-	94	80.235	ENSSPUG00000017742	-	92	80.435	Sphenodon_punctatus
ENSVPAG00000005541	-	71	59.542	ENSTRUG00000011765	-	73	58.382	Takifugu_rubripes
ENSVPAG00000005541	-	51	66.667	ENSTNIG00000015299	-	68	69.455	Tetraodon_nigroviridis
ENSVPAG00000005541	-	94	84.510	ENSTBEG00000007504	-	100	84.510	Tupaia_belangeri
ENSVPAG00000005541	-	99	90.221	ENSTTRG00000006479	-	99	89.852	Tursiops_truncatus
ENSVPAG00000005541	-	89	69.405	ENSXETG00000005260	prpf38b	54	76.952	Xenopus_tropicalis
ENSVPAG00000005541	-	81	54.176	ENSXCOG00000008329	-	57	72.453	Xiphophorus_couchianus
ENSVPAG00000005541	-	81	54.176	ENSXMAG00000023831	-	57	72.453	Xiphophorus_maculatus