EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000005546 (Gene tree)
Gene ID: -
Gene Symbol: SF3B6
Alias: CGI-110|Ht006|P14|SAP14a|SF3B14a
Full Name: splicing factor 3b subunit 6
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 5161 bases
Position: chrGeneScaffold_1066:279868-285028
Accession: 30096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005153	RRM_1	PF00076.22	7.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005545	SF3B6-201	348	-	ENSVPAP00000005153	115 (aa)	-	UPI0000026353

Gene Model

Click here to download ENSVPAG00000005546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005546	SF3B6	100	100.000	ENSG00000115128	SF3B6	92	100.000	Homo_sapiens
ENSVPAG00000005546	SF3B6	100	98.261	ENSAPOG00000023788	sf3b6	92	98.261	Acanthochromis_polyacanthus
ENSVPAG00000005546	SF3B6	100	100.000	ENSAMEG00000002786	SF3B6	92	100.000	Ailuropoda_melanoleuca
ENSVPAG00000005546	SF3B6	100	98.261	ENSACIG00000012608	sf3b6	92	98.261	Amphilophus_citrinellus
ENSVPAG00000005546	SF3B6	100	98.261	ENSAOCG00000013394	sf3b6	92	98.261	Amphiprion_ocellaris
ENSVPAG00000005546	SF3B6	100	98.261	ENSAPEG00000015311	sf3b6	92	98.261	Amphiprion_percula
ENSVPAG00000005546	SF3B6	100	98.261	ENSATEG00000016569	sf3b6	92	98.261	Anabas_testudineus
ENSVPAG00000005546	SF3B6	100	100.000	ENSACAG00000011677	SF3B6	92	100.000	Anolis_carolinensis
ENSVPAG00000005546	SF3B6	100	100.000	ENSANAG00000027284	SF3B6	88	100.000	Aotus_nancymaae
ENSVPAG00000005546	SF3B6	100	98.261	ENSACLG00000007793	sf3b6	92	98.261	Astatotilapia_calliptera
ENSVPAG00000005546	SF3B6	100	100.000	ENSAMXG00000034888	sf3b6	92	100.000	Astyanax_mexicanus
ENSVPAG00000005546	SF3B6	100	100.000	ENSBTAG00000003407	SF3B6	92	100.000	Bos_taurus
ENSVPAG00000005546	SF3B6	100	98.261	ENSBTAG00000049128	-	92	98.261	Bos_taurus
ENSVPAG00000005546	SF3B6	99	71.930	WBGene00016808	C50D2.5	83	71.930	Caenorhabditis_elegans
ENSVPAG00000005546	SF3B6	100	100.000	ENSCJAG00000007716	SF3B6	92	100.000	Callithrix_jacchus
ENSVPAG00000005546	SF3B6	100	100.000	ENSCAFG00000003957	SF3B6	92	100.000	Canis_familiaris
ENSVPAG00000005546	SF3B6	100	100.000	ENSCAFG00020025576	SF3B6	92	100.000	Canis_lupus_dingo
ENSVPAG00000005546	SF3B6	100	100.000	ENSCHIG00000009902	SF3B6	92	100.000	Capra_hircus
ENSVPAG00000005546	SF3B6	100	100.000	ENSTSYG00000013978	SF3B6	92	100.000	Carlito_syrichta
ENSVPAG00000005546	SF3B6	100	100.000	ENSCAPG00000016302	SF3B6	94	100.000	Cavia_aperea
ENSVPAG00000005546	SF3B6	100	100.000	ENSCPOG00000008016	SF3B6	93	100.000	Cavia_porcellus
ENSVPAG00000005546	SF3B6	99	93.860	ENSCCAG00000018894	-	88	93.860	Cebus_capucinus
ENSVPAG00000005546	SF3B6	100	100.000	ENSCCAG00000036653	SF3B6	92	100.000	Cebus_capucinus
ENSVPAG00000005546	SF3B6	100	100.000	ENSCATG00000030936	SF3B6	92	100.000	Cercocebus_atys
ENSVPAG00000005546	SF3B6	100	100.000	ENSCLAG00000014512	SF3B6	94	100.000	Chinchilla_lanigera
ENSVPAG00000005546	SF3B6	100	100.000	ENSCSAG00000008390	SF3B6	92	100.000	Chlorocebus_sabaeus
ENSVPAG00000005546	SF3B6	100	100.000	ENSCHOG00000000689	SF3B6	92	100.000	Choloepus_hoffmanni
ENSVPAG00000005546	SF3B6	100	75.652	ENSCHOG00000013886	-	92	75.652	Choloepus_hoffmanni
ENSVPAG00000005546	SF3B6	100	100.000	ENSCPBG00000020042	SF3B6	92	100.000	Chrysemys_picta_bellii
ENSVPAG00000005546	SF3B6	98	79.646	ENSCING00000012689	-	89	79.646	Ciona_intestinalis
ENSVPAG00000005546	SF3B6	100	100.000	ENSCANG00000030559	SF3B6	92	100.000	Colobus_angolensis_palliatus
ENSVPAG00000005546	SF3B6	100	100.000	ENSCGRG00001014595	Sf3b6	97	100.000	Cricetulus_griseus_chok1gshd
ENSVPAG00000005546	SF3B6	100	100.000	ENSCGRG00000005272	Sf3b6	97	100.000	Cricetulus_griseus_crigri
ENSVPAG00000005546	SF3B6	100	97.391	ENSCSEG00000019017	sf3b6	92	97.391	Cynoglossus_semilaevis
ENSVPAG00000005546	SF3B6	100	99.130	ENSCVAG00000005055	sf3b6	92	99.130	Cyprinodon_variegatus
ENSVPAG00000005546	SF3B6	100	100.000	ENSDARG00000009753	sf3b6	92	100.000	Danio_rerio
ENSVPAG00000005546	SF3B6	100	100.000	ENSDNOG00000007148	SF3B6	92	100.000	Dasypus_novemcinctus
ENSVPAG00000005546	SF3B6	100	82.906	ENSDORG00000027390	-	91	82.906	Dipodomys_ordii
ENSVPAG00000005546	SF3B6	100	100.000	ENSDORG00000009772	Sf3b6	92	100.000	Dipodomys_ordii
ENSVPAG00000005546	SF3B6	100	82.906	ENSDORG00000029761	-	91	82.906	Dipodomys_ordii
ENSVPAG00000005546	SF3B6	97	78.378	FBgn0035692	Sf3b6	92	78.378	Drosophila_melanogaster
ENSVPAG00000005546	SF3B6	100	92.174	ENSEBUG00000004424	sf3b6	91	92.174	Eptatretus_burgeri
ENSVPAG00000005546	SF3B6	100	100.000	ENSEASG00005009993	SF3B6	92	100.000	Equus_asinus_asinus
ENSVPAG00000005546	SF3B6	100	87.826	ENSEASG00005008061	-	92	87.826	Equus_asinus_asinus
ENSVPAG00000005546	SF3B6	77	85.393	ENSECAG00000027755	-	76	85.393	Equus_caballus
ENSVPAG00000005546	SF3B6	79	95.604	ENSECAG00000015618	SF3B6	83	95.604	Equus_caballus
ENSVPAG00000005546	SF3B6	100	98.261	ENSELUG00000010379	sf3b6	92	98.261	Esox_lucius
ENSVPAG00000005546	SF3B6	100	100.000	ENSFCAG00000031365	SF3B6	92	100.000	Felis_catus
ENSVPAG00000005546	SF3B6	100	100.000	ENSFALG00000001651	SF3B6	92	100.000	Ficedula_albicollis
ENSVPAG00000005546	SF3B6	100	100.000	ENSFDAG00000007864	SF3B6	92	100.000	Fukomys_damarensis
ENSVPAG00000005546	SF3B6	100	99.130	ENSFHEG00000000685	sf3b6	92	99.130	Fundulus_heteroclitus
ENSVPAG00000005546	SF3B6	100	97.391	ENSGMOG00000005123	sf3b6	92	97.391	Gadus_morhua
ENSVPAG00000005546	SF3B6	79	100.000	ENSGALG00000016501	SF3B6	100	100.000	Gallus_gallus
ENSVPAG00000005546	SF3B6	100	98.261	ENSGAFG00000009334	sf3b6	92	98.261	Gambusia_affinis
ENSVPAG00000005546	SF3B6	100	97.391	ENSGACG00000004803	sf3b6	92	97.391	Gasterosteus_aculeatus
ENSVPAG00000005546	SF3B6	100	100.000	ENSGAGG00000012240	SF3B6	92	100.000	Gopherus_agassizii
ENSVPAG00000005546	SF3B6	100	100.000	ENSGGOG00000040806	SF3B6	92	100.000	Gorilla_gorilla
ENSVPAG00000005546	SF3B6	100	98.261	ENSHBUG00000012556	sf3b6	92	98.261	Haplochromis_burtoni
ENSVPAG00000005546	SF3B6	100	100.000	ENSHGLG00000014895	SF3B14	92	100.000	Heterocephalus_glaber_female
ENSVPAG00000005546	SF3B6	100	100.000	ENSHGLG00100008639	SF3B14	92	100.000	Heterocephalus_glaber_male
ENSVPAG00000005546	SF3B6	100	99.130	ENSHCOG00000019962	sf3b6	92	99.130	Hippocampus_comes
ENSVPAG00000005546	SF3B6	100	100.000	ENSIPUG00000023800	sf3b6	92	100.000	Ictalurus_punctatus
ENSVPAG00000005546	SF3B6	100	100.000	ENSJJAG00000021819	Sf3b6	92	100.000	Jaculus_jaculus
ENSVPAG00000005546	SF3B6	100	98.261	ENSKMAG00000004000	sf3b6	92	98.261	Kryptolebias_marmoratus
ENSVPAG00000005546	SF3B6	100	98.261	ENSLBEG00000022937	sf3b6	92	98.261	Labrus_bergylta
ENSVPAG00000005546	SF3B6	100	100.000	ENSLACG00000014326	SF3B6	92	100.000	Latimeria_chalumnae
ENSVPAG00000005546	SF3B6	100	100.000	ENSLOCG00000016481	sf3b6	92	100.000	Lepisosteus_oculatus
ENSVPAG00000005546	SF3B6	100	100.000	ENSLAFG00000029423	SF3B6	92	100.000	Loxodonta_africana
ENSVPAG00000005546	SF3B6	100	100.000	ENSMFAG00000038178	SF3B6	92	100.000	Macaca_fascicularis
ENSVPAG00000005546	SF3B6	100	100.000	ENSMMUG00000001282	SF3B6	92	100.000	Macaca_mulatta
ENSVPAG00000005546	SF3B6	100	100.000	ENSMNEG00000029050	SF3B6	92	100.000	Macaca_nemestrina
ENSVPAG00000005546	SF3B6	100	100.000	ENSMLEG00000019896	SF3B6	92	100.000	Mandrillus_leucophaeus
ENSVPAG00000005546	SF3B6	75	97.674	ENSMAMG00000007713	sf3b6	78	97.674	Mastacembelus_armatus
ENSVPAG00000005546	SF3B6	100	98.261	ENSMZEG00005003557	sf3b6	92	98.261	Maylandia_zebra
ENSVPAG00000005546	SF3B6	100	100.000	ENSMGAG00000014057	SF3B6	92	100.000	Meleagris_gallopavo
ENSVPAG00000005546	SF3B6	100	100.000	ENSMAUG00000000586	-	92	100.000	Mesocricetus_auratus
ENSVPAG00000005546	SF3B6	100	100.000	ENSMICG00000032874	SF3B6	92	100.000	Microcebus_murinus
ENSVPAG00000005546	SF3B6	100	100.000	ENSMOCG00000014338	Sf3b6	92	100.000	Microtus_ochrogaster
ENSVPAG00000005546	SF3B6	100	99.130	ENSMMOG00000015653	sf3b6	92	99.130	Mola_mola
ENSVPAG00000005546	SF3B6	100	92.174	ENSMODG00000002144	SF3B6	92	92.174	Monodelphis_domestica
ENSVPAG00000005546	SF3B6	100	99.130	ENSMALG00000019642	sf3b6	62	99.130	Monopterus_albus
ENSVPAG00000005546	SF3B6	100	100.000	MGP_CAROLIEiJ_G0017590	Sf3b6	92	100.000	Mus_caroli
ENSVPAG00000005546	SF3B6	100	100.000	ENSMUSG00000037361	Sf3b6	100	97.368	Mus_musculus
ENSVPAG00000005546	SF3B6	100	100.000	MGP_PahariEiJ_G0029348	Sf3b6	92	100.000	Mus_pahari
ENSVPAG00000005546	SF3B6	100	100.000	MGP_SPRETEiJ_G0018434	Sf3b6	92	100.000	Mus_spretus
ENSVPAG00000005546	SF3B6	100	100.000	ENSMPUG00000013957	SF3B6	92	100.000	Mustela_putorius_furo
ENSVPAG00000005546	SF3B6	100	100.000	ENSMLUG00000002473	SF3B6	92	100.000	Myotis_lucifugus
ENSVPAG00000005546	SF3B6	100	100.000	ENSNGAG00000020256	Sf3b6	92	100.000	Nannospalax_galili
ENSVPAG00000005546	SF3B6	100	98.261	ENSNBRG00000018244	sf3b6	92	98.261	Neolamprologus_brichardi
ENSVPAG00000005546	SF3B6	100	100.000	ENSNLEG00000000815	-	92	100.000	Nomascus_leucogenys
ENSVPAG00000005546	SF3B6	95	100.000	ENSODEG00000009547	SF3B6	92	100.000	Octodon_degus
ENSVPAG00000005546	SF3B6	100	98.261	ENSONIG00000001219	sf3b6	92	98.261	Oreochromis_niloticus
ENSVPAG00000005546	SF3B6	100	100.000	ENSOANG00000007627	SF3B6	92	100.000	Ornithorhynchus_anatinus
ENSVPAG00000005546	SF3B6	100	100.000	ENSOCUG00000022008	SF3B6	92	100.000	Oryctolagus_cuniculus
ENSVPAG00000005546	SF3B6	100	98.261	ENSORLG00000015955	sf3b6	92	98.261	Oryzias_latipes
ENSVPAG00000005546	SF3B6	100	98.261	ENSORLG00020005875	sf3b6	92	98.261	Oryzias_latipes_hni
ENSVPAG00000005546	SF3B6	100	98.261	ENSORLG00015001347	sf3b6	92	98.261	Oryzias_latipes_hsok
ENSVPAG00000005546	SF3B6	100	98.261	ENSOMEG00000014506	sf3b6	92	98.261	Oryzias_melastigma
ENSVPAG00000005546	SF3B6	100	100.000	ENSOGAG00000004468	SF3B6	92	100.000	Otolemur_garnettii
ENSVPAG00000005546	SF3B6	100	100.000	ENSOARG00000017819	SF3B6	92	100.000	Ovis_aries
ENSVPAG00000005546	SF3B6	100	100.000	ENSPPAG00000027816	SF3B6	92	100.000	Pan_paniscus
ENSVPAG00000005546	SF3B6	100	100.000	ENSPPRG00000023257	SF3B6	92	100.000	Panthera_pardus
ENSVPAG00000005546	SF3B6	100	100.000	ENSPTIG00000013322	SF3B6	92	100.000	Panthera_tigris_altaica
ENSVPAG00000005546	SF3B6	100	100.000	ENSPTRG00000011709	SF3B6	92	100.000	Pan_troglodytes
ENSVPAG00000005546	SF3B6	100	100.000	ENSPANG00000021963	SF3B6	92	100.000	Papio_anubis
ENSVPAG00000005546	SF3B6	100	100.000	ENSPKIG00000012311	sf3b6	92	100.000	Paramormyrops_kingsleyae
ENSVPAG00000005546	SF3B6	100	100.000	ENSPSIG00000017115	SF3B6	100	100.000	Pelodiscus_sinensis
ENSVPAG00000005546	SF3B6	76	96.552	ENSPMGG00000014621	sf3b6	73	96.552	Periophthalmus_magnuspinnatus
ENSVPAG00000005546	SF3B6	100	100.000	ENSPEMG00000010308	Sf3b6	96	100.000	Peromyscus_maniculatus_bairdii
ENSVPAG00000005546	SF3B6	100	89.565	ENSPMAG00000006008	sf3b6	92	89.565	Petromyzon_marinus
ENSVPAG00000005546	SF3B6	99	77.193	ENSPCIG00000015858	-	91	77.193	Phascolarctos_cinereus
ENSVPAG00000005546	SF3B6	100	100.000	ENSPCIG00000022128	-	92	100.000	Phascolarctos_cinereus
ENSVPAG00000005546	SF3B6	100	98.261	ENSPFOG00000012494	sf3b6	92	98.261	Poecilia_formosa
ENSVPAG00000005546	SF3B6	100	98.261	ENSPLAG00000020460	sf3b6	92	98.261	Poecilia_latipinna
ENSVPAG00000005546	SF3B6	100	98.261	ENSPMEG00000004426	sf3b6	92	98.261	Poecilia_mexicana
ENSVPAG00000005546	SF3B6	100	100.000	ENSPPYG00000012603	SF3B6	92	100.000	Pongo_abelii
ENSVPAG00000005546	SF3B6	100	100.000	ENSPVAG00000011346	SF3B6	92	100.000	Pteropus_vampyrus
ENSVPAG00000005546	SF3B6	100	98.261	ENSPNYG00000021832	sf3b6	92	98.261	Pundamilia_nyererei
ENSVPAG00000005546	SF3B6	100	100.000	ENSPNAG00000008845	sf3b6	92	100.000	Pygocentrus_nattereri
ENSVPAG00000005546	SF3B6	100	83.478	ENSRNOG00000046172	Sf3b6	92	83.478	Rattus_norvegicus
ENSVPAG00000005546	SF3B6	100	100.000	ENSRBIG00000039598	SF3B6	96	100.000	Rhinopithecus_bieti
ENSVPAG00000005546	SF3B6	100	100.000	ENSRROG00000011368	SF3B6	92	100.000	Rhinopithecus_roxellana
ENSVPAG00000005546	SF3B6	100	100.000	ENSSBOG00000002914	SF3B6	92	100.000	Saimiri_boliviensis_boliviensis
ENSVPAG00000005546	SF3B6	100	100.000	ENSSFOG00015014370	sf3b6	92	100.000	Scleropages_formosus
ENSVPAG00000005546	SF3B6	100	98.261	ENSSMAG00000004566	sf3b6	92	98.261	Scophthalmus_maximus
ENSVPAG00000005546	SF3B6	100	98.261	ENSSDUG00000006538	sf3b6	92	98.261	Seriola_dumerili
ENSVPAG00000005546	SF3B6	100	98.261	ENSSLDG00000004494	sf3b6	92	98.261	Seriola_lalandi_dorsalis
ENSVPAG00000005546	SF3B6	100	100.000	ENSSARG00000011902	-	92	100.000	Sorex_araneus
ENSVPAG00000005546	SF3B6	100	100.000	ENSSPUG00000014919	SF3B6	92	100.000	Sphenodon_punctatus
ENSVPAG00000005546	SF3B6	100	98.261	ENSSPAG00000013201	sf3b6	92	98.261	Stegastes_partitus
ENSVPAG00000005546	SF3B6	100	100.000	ENSSSCG00000008587	SF3B6	92	100.000	Sus_scrofa
ENSVPAG00000005546	SF3B6	100	100.000	ENSTGUG00000013191	SF3B6	92	100.000	Taeniopygia_guttata
ENSVPAG00000005546	SF3B6	100	98.261	ENSTRUG00000025286	sf3b6	92	98.261	Takifugu_rubripes
ENSVPAG00000005546	SF3B6	100	98.261	ENSTNIG00000009719	sf3b6	92	98.261	Tetraodon_nigroviridis
ENSVPAG00000005546	SF3B6	100	100.000	ENSTBEG00000012532	SF3B6	100	100.000	Tupaia_belangeri
ENSVPAG00000005546	SF3B6	100	100.000	ENSTTRG00000013430	SF3B6	100	100.000	Tursiops_truncatus
ENSVPAG00000005546	SF3B6	100	100.000	ENSUAMG00000025329	SF3B6	92	100.000	Ursus_americanus
ENSVPAG00000005546	SF3B6	100	81.897	ENSUAMG00000000978	-	92	81.897	Ursus_americanus
ENSVPAG00000005546	SF3B6	100	100.000	ENSUMAG00000022835	SF3B6	92	100.000	Ursus_maritimus
ENSVPAG00000005546	SF3B6	100	100.000	ENSVVUG00000010874	SF3B6	92	100.000	Vulpes_vulpes
ENSVPAG00000005546	SF3B6	100	99.130	ENSXETG00000018204	sf3b6	92	99.130	Xenopus_tropicalis
ENSVPAG00000005546	SF3B6	84	84.466	ENSXCOG00000008477	sf3b6	80	84.466	Xiphophorus_couchianus
ENSVPAG00000005546	SF3B6	100	98.261	ENSXMAG00000010747	sf3b6	92	98.261	Xiphophorus_maculatus