EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000005668 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 23803 bases
Position: chrGeneScaffold_549:26491-50293
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005270	SRP54	PF00448.22	8.3e-79	1	1
ENSVPAP00000005270	SRP54_N	PF02881.19	6.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005671	SRP54-201	1419	-	ENSVPAP00000005270	473 (aa)	-	UPI00018BD332

Gene Model

Click here to download ENSVPAG00000005668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005668's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005668	SRP54	100	99.789	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSVPAG00000005668	SRP54	100	95.359	ENSAPOG00000011314	srp54	94	95.359	Acanthochromis_polyacanthus
ENSVPAG00000005668	SRP54	100	99.789	ENSAMEG00000015544	SRP54	94	99.789	Ailuropoda_melanoleuca
ENSVPAG00000005668	SRP54	95	94.432	ENSACIG00000022831	srp54	97	94.432	Amphilophus_citrinellus
ENSVPAG00000005668	SRP54	100	95.359	ENSAOCG00000019401	srp54	94	95.359	Amphiprion_ocellaris
ENSVPAG00000005668	SRP54	100	95.359	ENSAPEG00000001977	srp54	94	95.359	Amphiprion_percula
ENSVPAG00000005668	SRP54	100	95.781	ENSATEG00000013877	srp54	94	95.781	Anabas_testudineus
ENSVPAG00000005668	SRP54	100	98.523	ENSAPLG00000010125	SRP54	95	98.523	Anas_platyrhynchos
ENSVPAG00000005668	SRP54	85	95.050	ENSACAG00000010631	-	93	95.050	Anolis_carolinensis
ENSVPAG00000005668	SRP54	63	81.940	ENSACAG00000001124	-	90	81.940	Anolis_carolinensis
ENSVPAG00000005668	SRP54	100	98.312	ENSACAG00000002103	-	94	98.312	Anolis_carolinensis
ENSVPAG00000005668	SRP54	100	99.789	ENSANAG00000022133	SRP54	94	99.789	Aotus_nancymaae
ENSVPAG00000005668	SRP54	100	95.570	ENSACLG00000015866	srp54	94	95.570	Astatotilapia_calliptera
ENSVPAG00000005668	SRP54	100	95.148	ENSAMXG00000032669	SRP54	94	95.148	Astyanax_mexicanus
ENSVPAG00000005668	SRP54	100	99.789	ENSBTAG00000019085	SRP54	94	99.789	Bos_taurus
ENSVPAG00000005668	SRP54	100	72.117	WBGene00009012	F21D5.7	96	72.117	Caenorhabditis_elegans
ENSVPAG00000005668	SRP54	100	99.789	ENSCJAG00000006581	SRP54	94	99.789	Callithrix_jacchus
ENSVPAG00000005668	SRP54	100	99.789	ENSCAFG00000013331	SRP54	94	99.789	Canis_familiaris
ENSVPAG00000005668	SRP54	100	99.789	ENSCAFG00020023427	SRP54	94	99.789	Canis_lupus_dingo
ENSVPAG00000005668	SRP54	100	99.789	ENSCHIG00000026345	SRP54	94	99.789	Capra_hircus
ENSVPAG00000005668	SRP54	100	88.397	ENSTSYG00000035333	-	93	88.397	Carlito_syrichta
ENSVPAG00000005668	SRP54	100	99.578	ENSTSYG00000002680	-	94	99.578	Carlito_syrichta
ENSVPAG00000005668	SRP54	100	64.082	ENSCAPG00000008780	SRP54	100	64.082	Cavia_aperea
ENSVPAG00000005668	SRP54	100	99.367	ENSCPOG00000003691	SRP54	94	99.367	Cavia_porcellus
ENSVPAG00000005668	SRP54	89	99.487	ENSCCAG00000024179	SRP54	93	99.743	Cebus_capucinus
ENSVPAG00000005668	SRP54	100	99.789	ENSCATG00000034083	SRP54	94	99.789	Cercocebus_atys
ENSVPAG00000005668	SRP54	100	99.789	ENSCLAG00000015076	SRP54	94	99.789	Chinchilla_lanigera
ENSVPAG00000005668	SRP54	100	99.789	ENSCSAG00000015575	SRP54	94	99.789	Chlorocebus_sabaeus
ENSVPAG00000005668	SRP54	100	87.553	ENSCHOG00000008986	SRP54	99	87.553	Choloepus_hoffmanni
ENSVPAG00000005668	SRP54	100	98.945	ENSCPBG00000026195	SRP54	94	98.945	Chrysemys_picta_bellii
ENSVPAG00000005668	SRP54	100	82.911	ENSCING00000007380	-	94	82.911	Ciona_intestinalis
ENSVPAG00000005668	SRP54	100	99.789	ENSCANG00000028532	SRP54	94	99.789	Colobus_angolensis_palliatus
ENSVPAG00000005668	SRP54	100	99.367	ENSCGRG00001009525	-	94	99.367	Cricetulus_griseus_chok1gshd
ENSVPAG00000005668	SRP54	81	99.221	ENSCGRG00000009453	-	89	99.221	Cricetulus_griseus_crigri
ENSVPAG00000005668	SRP54	100	94.726	ENSCSEG00000012392	srp54	94	94.726	Cynoglossus_semilaevis
ENSVPAG00000005668	SRP54	100	95.359	ENSCVAG00000010395	srp54	94	95.359	Cyprinodon_variegatus
ENSVPAG00000005668	SRP54	100	95.570	ENSDARG00000098367	srp54	94	95.570	Danio_rerio
ENSVPAG00000005668	SRP54	100	99.789	ENSDNOG00000032525	SRP54	94	99.789	Dasypus_novemcinctus
ENSVPAG00000005668	SRP54	94	85.011	ENSDORG00000005159	-	97	85.011	Dipodomys_ordii
ENSVPAG00000005668	SRP54	100	77.426	FBgn0010747	Srp54k	93	77.637	Drosophila_melanogaster
ENSVPAG00000005668	SRP54	100	98.523	ENSETEG00000016307	-	94	98.523	Echinops_telfairi
ENSVPAG00000005668	SRP54	82	57.990	ENSETEG00000012102	-	93	57.990	Echinops_telfairi
ENSVPAG00000005668	SRP54	100	88.819	ENSEBUG00000009437	-	94	88.819	Eptatretus_burgeri
ENSVPAG00000005668	SRP54	100	99.789	ENSEASG00005002057	SRP54	94	99.789	Equus_asinus_asinus
ENSVPAG00000005668	SRP54	100	99.789	ENSECAG00000018042	SRP54	93	99.789	Equus_caballus
ENSVPAG00000005668	SRP54	100	82.068	ENSEEUG00000001511	SRP54	94	82.068	Erinaceus_europaeus
ENSVPAG00000005668	SRP54	100	94.726	ENSELUG00000003395	srp54	94	94.726	Esox_lucius
ENSVPAG00000005668	SRP54	100	99.578	ENSFCAG00000032033	SRP54	94	99.578	Felis_catus
ENSVPAG00000005668	SRP54	100	98.523	ENSFALG00000005995	SRP54	94	98.523	Ficedula_albicollis
ENSVPAG00000005668	SRP54	100	99.789	ENSFDAG00000016767	SRP54	95	99.789	Fukomys_damarensis
ENSVPAG00000005668	SRP54	100	94.937	ENSFHEG00000004263	srp54	94	94.937	Fundulus_heteroclitus
ENSVPAG00000005668	SRP54	95	89.286	ENSGMOG00000011391	srp54	94	89.286	Gadus_morhua
ENSVPAG00000005668	SRP54	100	98.523	ENSGALG00000023135	SRP54	94	98.523	Gallus_gallus
ENSVPAG00000005668	SRP54	100	95.570	ENSGAFG00000011586	srp54	94	95.570	Gambusia_affinis
ENSVPAG00000005668	SRP54	100	94.937	ENSGACG00000004181	srp54	100	94.931	Gasterosteus_aculeatus
ENSVPAG00000005668	SRP54	100	98.945	ENSGAGG00000014766	SRP54	94	98.945	Gopherus_agassizii
ENSVPAG00000005668	SRP54	100	99.789	ENSGGOG00000002926	SRP54	94	99.789	Gorilla_gorilla
ENSVPAG00000005668	SRP54	100	95.570	ENSHBUG00000005678	srp54	94	95.570	Haplochromis_burtoni
ENSVPAG00000005668	SRP54	100	99.789	ENSHGLG00000002850	SRP54	94	99.789	Heterocephalus_glaber_female
ENSVPAG00000005668	SRP54	100	99.789	ENSHGLG00100005263	SRP54	94	99.789	Heterocephalus_glaber_male
ENSVPAG00000005668	SRP54	100	66.667	ENSHGLG00100007281	-	93	66.667	Heterocephalus_glaber_male
ENSVPAG00000005668	SRP54	100	93.671	ENSHCOG00000021127	srp54	94	93.671	Hippocampus_comes
ENSVPAG00000005668	SRP54	100	94.726	ENSIPUG00000001420	srp54	94	94.726	Ictalurus_punctatus
ENSVPAG00000005668	SRP54	100	99.789	ENSSTOG00000016023	SRP54	94	99.789	Ictidomys_tridecemlineatus
ENSVPAG00000005668	SRP54	86	74.878	ENSJJAG00000016404	-	92	74.878	Jaculus_jaculus
ENSVPAG00000005668	SRP54	100	94.304	ENSJJAG00000013417	-	94	94.304	Jaculus_jaculus
ENSVPAG00000005668	SRP54	100	94.937	ENSKMAG00000007707	srp54	94	94.937	Kryptolebias_marmoratus
ENSVPAG00000005668	SRP54	100	95.359	ENSLBEG00000018690	srp54	94	95.359	Labrus_bergylta
ENSVPAG00000005668	SRP54	100	95.359	ENSLBEG00000021122	srp54	94	95.359	Labrus_bergylta
ENSVPAG00000005668	SRP54	100	95.781	ENSLACG00000017890	SRP54	94	95.781	Latimeria_chalumnae
ENSVPAG00000005668	SRP54	100	96.414	ENSLOCG00000009440	srp54	94	96.414	Lepisosteus_oculatus
ENSVPAG00000005668	SRP54	100	99.789	ENSLAFG00000012007	SRP54	94	99.789	Loxodonta_africana
ENSVPAG00000005668	SRP54	100	99.789	ENSMFAG00000044371	SRP54	94	99.789	Macaca_fascicularis
ENSVPAG00000005668	SRP54	100	99.789	ENSMMUG00000015073	FAM177A1	94	99.789	Macaca_mulatta
ENSVPAG00000005668	SRP54	100	99.789	ENSMNEG00000006947	SRP54	94	99.789	Macaca_nemestrina
ENSVPAG00000005668	SRP54	100	99.789	ENSMLEG00000042251	SRP54	94	99.789	Mandrillus_leucophaeus
ENSVPAG00000005668	SRP54	100	95.570	ENSMAMG00000004803	srp54	94	95.570	Mastacembelus_armatus
ENSVPAG00000005668	SRP54	100	95.570	ENSMZEG00005027528	srp54	94	95.570	Maylandia_zebra
ENSVPAG00000005668	SRP54	100	93.487	ENSMGAG00000012481	SRP54	94	93.487	Meleagris_gallopavo
ENSVPAG00000005668	SRP54	100	99.578	ENSMAUG00000014447	-	94	99.578	Mesocricetus_auratus
ENSVPAG00000005668	SRP54	100	99.789	ENSMICG00000010270	SRP54	94	99.789	Microcebus_murinus
ENSVPAG00000005668	SRP54	86	99.512	ENSMOCG00000000948	-	93	99.512	Microtus_ochrogaster
ENSVPAG00000005668	SRP54	94	93.960	ENSMMOG00000020303	srp54	98	93.960	Mola_mola
ENSVPAG00000005668	SRP54	100	99.578	ENSMODG00000023150	-	94	99.578	Monodelphis_domestica
ENSVPAG00000005668	SRP54	100	99.578	ENSMODG00000012925	-	94	99.578	Monodelphis_domestica
ENSVPAG00000005668	SRP54	93	95.260	ENSMALG00000009163	srp54	98	95.260	Monopterus_albus
ENSVPAG00000005668	SRP54	100	99.578	MGP_CAROLIEiJ_G0017754	-	94	99.578	Mus_caroli
ENSVPAG00000005668	SRP54	100	98.734	ENSMUSG00000079108	Srp54c	94	98.734	Mus_musculus
ENSVPAG00000005668	SRP54	100	99.578	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSVPAG00000005668	SRP54	100	99.578	ENSMUSG00000112449	Srp54b	94	99.578	Mus_musculus
ENSVPAG00000005668	SRP54	100	99.578	MGP_PahariEiJ_G0029510	-	94	99.578	Mus_pahari
ENSVPAG00000005668	SRP54	100	99.789	ENSMPUG00000016302	SRP54	94	99.789	Mustela_putorius_furo
ENSVPAG00000005668	SRP54	100	99.156	ENSMLUG00000008958	SRP54	94	99.156	Myotis_lucifugus
ENSVPAG00000005668	SRP54	100	89.030	ENSNGAG00000019806	-	93	89.030	Nannospalax_galili
ENSVPAG00000005668	SRP54	86	95.122	ENSNBRG00000006000	srp54	93	95.122	Neolamprologus_brichardi
ENSVPAG00000005668	SRP54	100	99.789	ENSNLEG00000003496	SRP54	94	99.789	Nomascus_leucogenys
ENSVPAG00000005668	SRP54	71	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSVPAG00000005668	SRP54	55	100.000	ENSOPRG00000014502	-	54	100.000	Ochotona_princeps
ENSVPAG00000005668	SRP54	100	99.789	ENSODEG00000004865	SRP54	94	99.789	Octodon_degus
ENSVPAG00000005668	SRP54	100	95.570	ENSONIG00000011768	srp54	94	95.570	Oreochromis_niloticus
ENSVPAG00000005668	SRP54	100	99.789	ENSOANG00000014051	SRP54	94	99.789	Ornithorhynchus_anatinus
ENSVPAG00000005668	SRP54	100	99.156	ENSOCUG00000007838	SRP54	94	99.156	Oryctolagus_cuniculus
ENSVPAG00000005668	SRP54	100	95.359	ENSORLG00000010027	srp54	94	95.359	Oryzias_latipes
ENSVPAG00000005668	SRP54	100	95.359	ENSORLG00020001878	srp54	94	95.359	Oryzias_latipes_hni
ENSVPAG00000005668	SRP54	100	95.359	ENSORLG00015021866	srp54	94	95.359	Oryzias_latipes_hsok
ENSVPAG00000005668	SRP54	100	95.148	ENSOMEG00000020952	srp54	94	95.148	Oryzias_melastigma
ENSVPAG00000005668	SRP54	100	99.789	ENSOGAG00000012188	SRP54	94	99.789	Otolemur_garnettii
ENSVPAG00000005668	SRP54	100	99.789	ENSOARG00000007160	SRP54	94	99.789	Ovis_aries
ENSVPAG00000005668	SRP54	100	99.789	ENSPPAG00000017434	SRP54	94	99.789	Pan_paniscus
ENSVPAG00000005668	SRP54	100	98.523	ENSPPRG00000014047	SRP54	94	98.523	Panthera_pardus
ENSVPAG00000005668	SRP54	100	99.578	ENSPTIG00000000744	SRP54	90	99.578	Panthera_tigris_altaica
ENSVPAG00000005668	SRP54	100	99.789	ENSPTRG00000006259	FAM177A1	94	99.789	Pan_troglodytes
ENSVPAG00000005668	SRP54	100	99.789	ENSPANG00000023853	SRP54	94	99.789	Papio_anubis
ENSVPAG00000005668	SRP54	100	95.148	ENSPKIG00000001953	srp54	94	95.148	Paramormyrops_kingsleyae
ENSVPAG00000005668	SRP54	100	98.734	ENSPSIG00000006476	SRP54	94	98.734	Pelodiscus_sinensis
ENSVPAG00000005668	SRP54	97	92.826	ENSPMGG00000004127	srp54	99	92.826	Periophthalmus_magnuspinnatus
ENSVPAG00000005668	SRP54	100	86.258	ENSPEMG00000019634	-	94	86.258	Peromyscus_maniculatus_bairdii
ENSVPAG00000005668	SRP54	100	90.295	ENSPMAG00000006078	-	94	90.295	Petromyzon_marinus
ENSVPAG00000005668	SRP54	100	99.578	ENSPCIG00000016175	SRP54	94	99.578	Phascolarctos_cinereus
ENSVPAG00000005668	SRP54	100	95.570	ENSPFOG00000008870	srp54	94	95.570	Poecilia_formosa
ENSVPAG00000005668	SRP54	100	95.570	ENSPLAG00000009889	srp54	94	95.570	Poecilia_latipinna
ENSVPAG00000005668	SRP54	100	95.570	ENSPMEG00000008601	srp54	94	95.570	Poecilia_mexicana
ENSVPAG00000005668	SRP54	100	95.570	ENSPREG00000004505	srp54	94	95.570	Poecilia_reticulata
ENSVPAG00000005668	SRP54	100	94.304	ENSPPYG00000005739	SRP54	94	94.304	Pongo_abelii
ENSVPAG00000005668	SRP54	100	95.359	ENSPCAG00000006268	SRP54	94	95.359	Procavia_capensis
ENSVPAG00000005668	SRP54	100	97.684	ENSPCOG00000022473	SRP54	94	97.684	Propithecus_coquereli
ENSVPAG00000005668	SRP54	67	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSVPAG00000005668	SRP54	100	95.570	ENSPNYG00000009717	srp54	94	95.570	Pundamilia_nyererei
ENSVPAG00000005668	SRP54	100	95.359	ENSPNAG00000008544	srp54	94	95.359	Pygocentrus_nattereri
ENSVPAG00000005668	SRP54	100	99.367	ENSRNOG00000032776	Srp54a	94	99.367	Rattus_norvegicus
ENSVPAG00000005668	SRP54	100	99.789	ENSRROG00000041292	SRP54	94	99.789	Rhinopithecus_roxellana
ENSVPAG00000005668	SRP54	91	53.061	YPR088C	SRP54	81	53.061	Saccharomyces_cerevisiae
ENSVPAG00000005668	SRP54	95	98.894	ENSSBOG00000035145	SRP54	94	99.775	Saimiri_boliviensis_boliviensis
ENSVPAG00000005668	SRP54	66	99.681	ENSSHAG00000000671	SRP54	91	99.681	Sarcophilus_harrisii
ENSVPAG00000005668	SRP54	100	95.781	ENSSFOG00015013920	srp54	94	95.781	Scleropages_formosus
ENSVPAG00000005668	SRP54	100	94.726	ENSSMAG00000002441	srp54	89	94.726	Scophthalmus_maximus
ENSVPAG00000005668	SRP54	100	95.148	ENSSDUG00000018586	srp54	94	95.148	Seriola_dumerili
ENSVPAG00000005668	SRP54	100	94.937	ENSSLDG00000010476	srp54	94	94.937	Seriola_lalandi_dorsalis
ENSVPAG00000005668	SRP54	100	99.789	ENSSARG00000002744	SRP54	94	99.789	Sorex_araneus
ENSVPAG00000005668	SRP54	100	98.945	ENSSPUG00000013101	SRP54	94	98.945	Sphenodon_punctatus
ENSVPAG00000005668	SRP54	100	95.359	ENSSPAG00000002354	srp54	94	95.359	Stegastes_partitus
ENSVPAG00000005668	SRP54	100	99.789	ENSSSCG00000001955	SRP54	94	99.789	Sus_scrofa
ENSVPAG00000005668	SRP54	100	98.523	ENSTGUG00000011945	-	95	98.523	Taeniopygia_guttata
ENSVPAG00000005668	SRP54	100	94.726	ENSTRUG00000007057	srp54	94	94.726	Takifugu_rubripes
ENSVPAG00000005668	SRP54	100	94.515	ENSTNIG00000002589	srp54	94	94.515	Tetraodon_nigroviridis
ENSVPAG00000005668	SRP54	88	90.887	ENSTBEG00000011409	SRP54	93	90.887	Tupaia_belangeri
ENSVPAG00000005668	SRP54	100	89.030	ENSTTRG00000000928	SRP54	94	89.030	Tursiops_truncatus
ENSVPAG00000005668	SRP54	55	100.000	ENSUAMG00000012385	SRP54	100	100.000	Ursus_americanus
ENSVPAG00000005668	SRP54	100	99.789	ENSUMAG00000011234	SRP54	94	99.789	Ursus_maritimus
ENSVPAG00000005668	SRP54	100	99.789	ENSVVUG00000019962	SRP54	94	99.789	Vulpes_vulpes
ENSVPAG00000005668	SRP54	100	80.922	ENSXETG00000012290	srp54	94	80.922	Xenopus_tropicalis
ENSVPAG00000005668	SRP54	93	95.711	ENSXCOG00000004658	srp54	96	95.711	Xiphophorus_couchianus
ENSVPAG00000005668	SRP54	100	95.570	ENSXMAG00000018315	srp54	94	95.570	Xiphophorus_maculatus