EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000005679 (Gene tree)
Gene ID: -
Gene Symbol: RNASEH2B
Alias: AGS2|DLEU8|FLJ11712
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 30584 bases
Position: chrGeneScaffold_3200:427291-457874
Accession: 25671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005282	RNase_H2-Ydr279	PF09468.10	7.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005683	RNASEH2B-201	867	-	ENSVPAP00000005282	288 (aa)	-	UPI00018BDADC

Gene Model

Click here to download ENSVPAG00000005679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005679's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005679	RNASEH2B	100	89.236	ENSG00000136104	RNASEH2B	100	92.135	Homo_sapiens
ENSVPAG00000005679	RNASEH2B	95	52.347	ENSAPOG00000010496	rnaseh2b	90	52.347	Acanthochromis_polyacanthus
ENSVPAG00000005679	RNASEH2B	100	87.586	ENSAMEG00000012040	RNASEH2B	98	87.586	Ailuropoda_melanoleuca
ENSVPAG00000005679	RNASEH2B	89	47.059	ENSACIG00000021991	rnaseh2b	97	46.269	Amphilophus_citrinellus
ENSVPAG00000005679	RNASEH2B	92	52.985	ENSAOCG00000013398	rnaseh2b	87	52.985	Amphiprion_ocellaris
ENSVPAG00000005679	RNASEH2B	92	52.985	ENSAPEG00000006033	rnaseh2b	87	52.985	Amphiprion_percula
ENSVPAG00000005679	RNASEH2B	92	55.056	ENSATEG00000008370	rnaseh2b	87	55.224	Anabas_testudineus
ENSVPAG00000005679	RNASEH2B	89	66.279	ENSAPLG00000008955	RNASEH2B	98	66.418	Anas_platyrhynchos
ENSVPAG00000005679	RNASEH2B	97	57.801	ENSACAG00000011679	RNASEH2B	94	58.214	Anolis_carolinensis
ENSVPAG00000005679	RNASEH2B	100	88.194	ENSANAG00000020662	RNASEH2B	93	88.194	Aotus_nancymaae
ENSVPAG00000005679	RNASEH2B	93	50.746	ENSACLG00000000467	rnaseh2b	87	50.746	Astatotilapia_calliptera
ENSVPAG00000005679	RNASEH2B	92	53.759	ENSAMXG00000014351	rnaseh2b	86	53.759	Astyanax_mexicanus
ENSVPAG00000005679	RNASEH2B	99	88.153	ENSBTAG00000020149	RNASEH2B	93	88.153	Bos_taurus
ENSVPAG00000005679	RNASEH2B	78	85.398	ENSCJAG00000003822	-	84	85.398	Callithrix_jacchus
ENSVPAG00000005679	RNASEH2B	97	88.929	ENSCJAG00000008585	-	92	88.929	Callithrix_jacchus
ENSVPAG00000005679	RNASEH2B	100	83.681	ENSCAFG00000004295	RNASEH2B	93	82.807	Canis_familiaris
ENSVPAG00000005679	RNASEH2B	100	83.681	ENSCAFG00020000250	RNASEH2B	94	83.681	Canis_lupus_dingo
ENSVPAG00000005679	RNASEH2B	83	79.079	ENSCHIG00000012982	-	84	79.079	Capra_hircus
ENSVPAG00000005679	RNASEH2B	99	90.493	ENSCHIG00000018220	RNASEH2B	92	90.493	Capra_hircus
ENSVPAG00000005679	RNASEH2B	100	86.806	ENSTSYG00000009176	-	93	86.806	Carlito_syrichta
ENSVPAG00000005679	RNASEH2B	98	72.242	ENSTSYG00000031177	-	92	72.242	Carlito_syrichta
ENSVPAG00000005679	RNASEH2B	99	75.261	ENSCAPG00000009978	RNASEH2B	97	76.207	Cavia_aperea
ENSVPAG00000005679	RNASEH2B	100	83.045	ENSCPOG00000032527	RNASEH2B	93	83.045	Cavia_porcellus
ENSVPAG00000005679	RNASEH2B	99	88.153	ENSCCAG00000026979	RNASEH2B	93	88.153	Cebus_capucinus
ENSVPAG00000005679	RNASEH2B	94	90.074	ENSCATG00000031336	RNASEH2B	77	90.074	Cercocebus_atys
ENSVPAG00000005679	RNASEH2B	100	85.069	ENSCLAG00000003517	RNASEH2B	79	85.069	Chinchilla_lanigera
ENSVPAG00000005679	RNASEH2B	96	89.247	ENSCSAG00000017701	RNASEH2B	85	89.247	Chlorocebus_sabaeus
ENSVPAG00000005679	RNASEH2B	98	70.877	ENSCHOG00000013688	RNASEH2B	92	70.877	Choloepus_hoffmanni
ENSVPAG00000005679	RNASEH2B	93	61.852	ENSCPBG00000008684	RNASEH2B	86	60.833	Chrysemys_picta_bellii
ENSVPAG00000005679	RNASEH2B	86	40.230	ENSCING00000016454	-	82	39.313	Ciona_intestinalis
ENSVPAG00000005679	RNASEH2B	100	88.276	ENSCANG00000041511	-	93	88.276	Colobus_angolensis_palliatus
ENSVPAG00000005679	RNASEH2B	100	83.333	ENSCGRG00001000611	Rnaseh2b	93	83.333	Cricetulus_griseus_chok1gshd
ENSVPAG00000005679	RNASEH2B	100	83.333	ENSCGRG00000006077	Rnaseh2b	93	83.333	Cricetulus_griseus_crigri
ENSVPAG00000005679	RNASEH2B	92	52.985	ENSCSEG00000004910	rnaseh2b	86	55.285	Cynoglossus_semilaevis
ENSVPAG00000005679	RNASEH2B	92	51.673	ENSCVAG00000005212	rnaseh2b	87	51.673	Cyprinodon_variegatus
ENSVPAG00000005679	RNASEH2B	96	51.429	ENSDARG00000005128	rnaseh2b	90	51.429	Danio_rerio
ENSVPAG00000005679	RNASEH2B	100	75.000	ENSDNOG00000049666	-	93	75.000	Dasypus_novemcinctus
ENSVPAG00000005679	RNASEH2B	99	75.704	ENSDNOG00000034290	-	92	75.704	Dasypus_novemcinctus
ENSVPAG00000005679	RNASEH2B	100	84.375	ENSDORG00000010708	Rnaseh2b	93	84.375	Dipodomys_ordii
ENSVPAG00000005679	RNASEH2B	89	39.535	ENSEBUG00000005965	rnaseh2b	98	40.310	Eptatretus_burgeri
ENSVPAG00000005679	RNASEH2B	100	89.236	ENSEASG00005017323	RNASEH2B	93	89.236	Equus_asinus_asinus
ENSVPAG00000005679	RNASEH2B	100	88.542	ENSECAG00000014262	RNASEH2B	93	88.542	Equus_caballus
ENSVPAG00000005679	RNASEH2B	95	50.719	ENSELUG00000019560	rnaseh2b	90	50.357	Esox_lucius
ENSVPAG00000005679	RNASEH2B	94	87.868	ENSFCAG00000014257	RNASEH2B	85	87.868	Felis_catus
ENSVPAG00000005679	RNASEH2B	93	63.060	ENSFALG00000008435	RNASEH2B	91	63.060	Ficedula_albicollis
ENSVPAG00000005679	RNASEH2B	100	84.375	ENSFDAG00000009920	RNASEH2B	100	84.375	Fukomys_damarensis
ENSVPAG00000005679	RNASEH2B	92	53.903	ENSFHEG00000012160	rnaseh2b	87	53.903	Fundulus_heteroclitus
ENSVPAG00000005679	RNASEH2B	89	50.382	ENSGMOG00000016830	rnaseh2b	90	50.382	Gadus_morhua
ENSVPAG00000005679	RNASEH2B	89	65.637	ENSGALG00000017015	RNASEH2B	87	65.799	Gallus_gallus
ENSVPAG00000005679	RNASEH2B	92	53.558	ENSGAFG00000021222	rnaseh2b	87	53.558	Gambusia_affinis
ENSVPAG00000005679	RNASEH2B	92	51.460	ENSGACG00000002821	rnaseh2b	87	51.460	Gasterosteus_aculeatus
ENSVPAG00000005679	RNASEH2B	93	62.222	ENSGAGG00000014722	RNASEH2B	96	62.222	Gopherus_agassizii
ENSVPAG00000005679	RNASEH2B	100	88.621	ENSGGOG00000001044	RNASEH2B	93	88.621	Gorilla_gorilla
ENSVPAG00000005679	RNASEH2B	93	51.119	ENSHBUG00000006049	rnaseh2b	89	51.562	Haplochromis_burtoni
ENSVPAG00000005679	RNASEH2B	100	85.417	ENSHGLG00100015953	RNASEH2B	98	85.417	Heterocephalus_glaber_male
ENSVPAG00000005679	RNASEH2B	92	48.519	ENSHCOG00000003318	rnaseh2b	85	52.459	Hippocampus_comes
ENSVPAG00000005679	RNASEH2B	92	53.731	ENSIPUG00000023815	rnaseh2b	86	53.731	Ictalurus_punctatus
ENSVPAG00000005679	RNASEH2B	100	86.111	ENSSTOG00000015126	RNASEH2B	98	86.111	Ictidomys_tridecemlineatus
ENSVPAG00000005679	RNASEH2B	99	83.624	ENSJJAG00000013335	Rnaseh2b	96	83.624	Jaculus_jaculus
ENSVPAG00000005679	RNASEH2B	92	53.358	ENSKMAG00000002198	rnaseh2b	87	53.358	Kryptolebias_marmoratus
ENSVPAG00000005679	RNASEH2B	92	55.805	ENSLBEG00000019331	rnaseh2b	87	55.805	Labrus_bergylta
ENSVPAG00000005679	RNASEH2B	73	60.190	ENSLACG00000010782	RNASEH2B	91	60.088	Latimeria_chalumnae
ENSVPAG00000005679	RNASEH2B	96	54.676	ENSLOCG00000009296	rnaseh2b	90	54.676	Lepisosteus_oculatus
ENSVPAG00000005679	RNASEH2B	99	82.456	ENSLAFG00000030158	RNASEH2B	92	82.456	Loxodonta_africana
ENSVPAG00000005679	RNASEH2B	100	88.542	ENSMFAG00000038464	-	93	88.542	Macaca_fascicularis
ENSVPAG00000005679	RNASEH2B	100	78.819	ENSMMUG00000021746	RNASEH2B	87	89.238	Macaca_mulatta
ENSVPAG00000005679	RNASEH2B	100	88.542	ENSMNEG00000030580	RNASEH2B	93	88.542	Macaca_nemestrina
ENSVPAG00000005679	RNASEH2B	100	87.931	ENSMLEG00000043911	-	93	87.931	Mandrillus_leucophaeus
ENSVPAG00000005679	RNASEH2B	92	54.307	ENSMAMG00000017109	rnaseh2b	87	54.307	Mastacembelus_armatus
ENSVPAG00000005679	RNASEH2B	91	50.763	ENSMZEG00005021926	rnaseh2b	86	50.379	Maylandia_zebra
ENSVPAG00000005679	RNASEH2B	89	64.865	ENSMGAG00000015025	RNASEH2B	93	65.056	Meleagris_gallopavo
ENSVPAG00000005679	RNASEH2B	100	82.292	ENSMAUG00000016520	Rnaseh2b	93	82.292	Mesocricetus_auratus
ENSVPAG00000005679	RNASEH2B	100	88.542	ENSMICG00000000528	RNASEH2B	93	88.542	Microcebus_murinus
ENSVPAG00000005679	RNASEH2B	92	53.933	ENSMMOG00000019799	rnaseh2b	93	53.933	Mola_mola
ENSVPAG00000005679	RNASEH2B	97	66.786	ENSMODG00000010775	RNASEH2B	91	67.266	Monodelphis_domestica
ENSVPAG00000005679	RNASEH2B	92	54.104	ENSMALG00000004463	rnaseh2b	87	54.104	Monopterus_albus
ENSVPAG00000005679	RNASEH2B	80	82.684	MGP_CAROLIEiJ_G0019389	Rnaseh2b	92	70.934	Mus_caroli
ENSVPAG00000005679	RNASEH2B	100	81.661	ENSMUSG00000021932	Rnaseh2b	93	81.661	Mus_musculus
ENSVPAG00000005679	RNASEH2B	100	61.027	MGP_PahariEiJ_G0030407	-	94	62.195	Mus_pahari
ENSVPAG00000005679	RNASEH2B	77	86.547	ENSMPUG00000018010	RNASEH2B	93	86.547	Mustela_putorius_furo
ENSVPAG00000005679	RNASEH2B	99	88.850	ENSMLUG00000004065	-	93	88.850	Myotis_lucifugus
ENSVPAG00000005679	RNASEH2B	93	50.373	ENSNBRG00000003253	rnaseh2b	88	49.814	Neolamprologus_brichardi
ENSVPAG00000005679	RNASEH2B	100	88.276	ENSNLEG00000003804	RNASEH2B	93	88.276	Nomascus_leucogenys
ENSVPAG00000005679	RNASEH2B	96	65.233	ENSMEUG00000003665	RNASEH2B	96	65.233	Notamacropus_eugenii
ENSVPAG00000005679	RNASEH2B	54	87.821	ENSOPRG00000003695	-	77	66.531	Ochotona_princeps
ENSVPAG00000005679	RNASEH2B	83	78.333	ENSODEG00000005412	-	95	78.333	Octodon_degus
ENSVPAG00000005679	RNASEH2B	99	83.972	ENSODEG00000006793	-	93	83.972	Octodon_degus
ENSVPAG00000005679	RNASEH2B	93	50.746	ENSONIG00000006657	rnaseh2b	87	50.746	Oreochromis_niloticus
ENSVPAG00000005679	RNASEH2B	97	64.561	ENSOANG00000015537	RNASEH2B	98	64.561	Ornithorhynchus_anatinus
ENSVPAG00000005679	RNASEH2B	99	85.211	ENSOCUG00000008904	RNASEH2B	89	85.211	Oryctolagus_cuniculus
ENSVPAG00000005679	RNASEH2B	93	53.704	ENSORLG00000011850	rnaseh2b	88	53.704	Oryzias_latipes
ENSVPAG00000005679	RNASEH2B	93	54.444	ENSORLG00020012081	rnaseh2b	88	54.444	Oryzias_latipes_hni
ENSVPAG00000005679	RNASEH2B	93	54.444	ENSORLG00015015468	rnaseh2b	88	54.444	Oryzias_latipes_hsok
ENSVPAG00000005679	RNASEH2B	92	53.160	ENSOMEG00000012441	rnaseh2b	88	52.788	Oryzias_melastigma
ENSVPAG00000005679	RNASEH2B	100	85.172	ENSOGAG00000016486	RNASEH2B	97	85.172	Otolemur_garnettii
ENSVPAG00000005679	RNASEH2B	99	89.789	ENSOARG00000008701	RNASEH2B	96	89.789	Ovis_aries
ENSVPAG00000005679	RNASEH2B	97	87.544	ENSPPAG00000026374	RNASEH2B	96	88.018	Pan_paniscus
ENSVPAG00000005679	RNASEH2B	99	86.411	ENSPPRG00000012450	RNASEH2B	94	86.411	Panthera_pardus
ENSVPAG00000005679	RNASEH2B	96	87.455	ENSPTIG00000013918	RNASEH2B	99	87.455	Panthera_tigris_altaica
ENSVPAG00000005679	RNASEH2B	99	88.811	ENSPTRG00000005886	RNASEH2B	98	89.209	Pan_troglodytes
ENSVPAG00000005679	RNASEH2B	100	87.586	ENSPANG00000022424	-	93	87.586	Papio_anubis
ENSVPAG00000005679	RNASEH2B	93	49.442	ENSPKIG00000013386	rnaseh2b	87	49.442	Paramormyrops_kingsleyae
ENSVPAG00000005679	RNASEH2B	61	56.497	ENSPSIG00000002224	RNASEH2B	82	56.497	Pelodiscus_sinensis
ENSVPAG00000005679	RNASEH2B	69	54.500	ENSPMGG00000010299	rnaseh2b	96	54.500	Periophthalmus_magnuspinnatus
ENSVPAG00000005679	RNASEH2B	100	84.028	ENSPEMG00000019721	Rnaseh2b	93	84.028	Peromyscus_maniculatus_bairdii
ENSVPAG00000005679	RNASEH2B	93	60.448	ENSPCIG00000014535	-	89	60.902	Phascolarctos_cinereus
ENSVPAG00000005679	RNASEH2B	92	54.444	ENSPFOG00000016722	rnaseh2b	87	54.444	Poecilia_formosa
ENSVPAG00000005679	RNASEH2B	92	54.851	ENSPLAG00000011755	rnaseh2b	87	54.851	Poecilia_latipinna
ENSVPAG00000005679	RNASEH2B	92	54.851	ENSPMEG00000002721	rnaseh2b	87	54.851	Poecilia_mexicana
ENSVPAG00000005679	RNASEH2B	92	54.851	ENSPREG00000007737	rnaseh2b	87	54.851	Poecilia_reticulata
ENSVPAG00000005679	RNASEH2B	100	88.621	ENSPPYG00000005378	RNASEH2B	93	87.931	Pongo_abelii
ENSVPAG00000005679	RNASEH2B	100	89.931	ENSPCOG00000026623	RNASEH2B	93	89.931	Propithecus_coquereli
ENSVPAG00000005679	RNASEH2B	87	86.508	ENSPVAG00000000508	RNASEH2B	95	86.508	Pteropus_vampyrus
ENSVPAG00000005679	RNASEH2B	93	51.119	ENSPNYG00000013552	rnaseh2b	89	51.562	Pundamilia_nyererei
ENSVPAG00000005679	RNASEH2B	92	51.119	ENSPNAG00000024825	rnaseh2b	86	51.119	Pygocentrus_nattereri
ENSVPAG00000005679	RNASEH2B	100	81.944	ENSRNOG00000009192	Rnaseh2b	93	81.944	Rattus_norvegicus
ENSVPAG00000005679	RNASEH2B	97	76.978	ENSRBIG00000036017	-	91	76.978	Rhinopithecus_bieti
ENSVPAG00000005679	RNASEH2B	100	88.542	ENSRBIG00000028928	-	93	88.542	Rhinopithecus_bieti
ENSVPAG00000005679	RNASEH2B	83	70.168	ENSRROG00000044915	-	90	70.168	Rhinopithecus_roxellana
ENSVPAG00000005679	RNASEH2B	100	88.542	ENSRROG00000018808	-	93	88.542	Rhinopithecus_roxellana
ENSVPAG00000005679	RNASEH2B	97	88.571	ENSSBOG00000008081	RNASEH2B	100	88.214	Saimiri_boliviensis_boliviensis
ENSVPAG00000005679	RNASEH2B	97	65.714	ENSSHAG00000016190	RNASEH2B	90	66.187	Sarcophilus_harrisii
ENSVPAG00000005679	RNASEH2B	93	52.963	ENSSFOG00015010190	rnaseh2b	87	52.963	Scleropages_formosus
ENSVPAG00000005679	RNASEH2B	92	53.358	ENSSMAG00000001546	rnaseh2b	87	53.358	Scophthalmus_maximus
ENSVPAG00000005679	RNASEH2B	92	54.478	ENSSDUG00000007567	rnaseh2b	87	54.478	Seriola_dumerili
ENSVPAG00000005679	RNASEH2B	96	52.347	ENSSLDG00000012485	rnaseh2b	92	52.347	Seriola_lalandi_dorsalis
ENSVPAG00000005679	RNASEH2B	90	60.153	ENSSPUG00000006745	-	94	60.153	Sphenodon_punctatus
ENSVPAG00000005679	RNASEH2B	92	54.104	ENSSPAG00000020926	rnaseh2b	87	54.104	Stegastes_partitus
ENSVPAG00000005679	RNASEH2B	97	91.786	ENSSSCG00000024385	RNASEH2B	100	91.786	Sus_scrofa
ENSVPAG00000005679	RNASEH2B	93	63.060	ENSTGUG00000012104	RNASEH2B	98	63.060	Taeniopygia_guttata
ENSVPAG00000005679	RNASEH2B	92	55.224	ENSTRUG00000015098	rnaseh2b	87	55.224	Takifugu_rubripes
ENSVPAG00000005679	RNASEH2B	92	53.160	ENSTNIG00000013861	rnaseh2b	87	53.160	Tetraodon_nigroviridis
ENSVPAG00000005679	RNASEH2B	100	86.207	ENSTTRG00000010761	RNASEH2B	94	86.207	Tursiops_truncatus
ENSVPAG00000005679	RNASEH2B	100	88.889	ENSUAMG00000022849	RNASEH2B	100	89.286	Ursus_americanus
ENSVPAG00000005679	RNASEH2B	100	87.847	ENSUMAG00000018556	RNASEH2B	100	88.214	Ursus_maritimus
ENSVPAG00000005679	RNASEH2B	99	83.451	ENSVVUG00000024015	RNASEH2B	85	83.451	Vulpes_vulpes
ENSVPAG00000005679	RNASEH2B	97	56.786	ENSXETG00000020720	rnaseh2b	91	56.786	Xenopus_tropicalis
ENSVPAG00000005679	RNASEH2B	92	52.985	ENSXCOG00000018732	rnaseh2b	88	52.672	Xiphophorus_couchianus
ENSVPAG00000005679	RNASEH2B	92	53.933	ENSXMAG00000022554	rnaseh2b	87	53.933	Xiphophorus_maculatus