EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000005902 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 127004 bases
Position: chrscaffold_2819:18967-145970
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005481	PUF	PF00806.19	2.5e-71	1	8
ENSVPAP00000005481	PUF	PF00806.19	2.5e-71	2	8
ENSVPAP00000005481	PUF	PF00806.19	2.5e-71	3	8
ENSVPAP00000005481	PUF	PF00806.19	2.5e-71	4	8
ENSVPAP00000005481	PUF	PF00806.19	2.5e-71	5	8
ENSVPAP00000005481	PUF	PF00806.19	2.5e-71	6	8
ENSVPAP00000005481	PUF	PF00806.19	2.5e-71	7	8
ENSVPAP00000005481	PUF	PF00806.19	2.5e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000005902	PUM1-201	3576	-	ENSVPAP00000005481	1191 (aa)	-	UPI00018BCDA4

Gene Model

Click here to download ENSVPAG00000005902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000005902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000005902	PUM1	82	80.888	ENSVPAG00000005056	PUM2	92	81.134

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000005902	PUM1	92	99.664	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSVPAG00000005902	PUM1	92	81.807	ENSAPOG00000021632	pum1	92	83.951	Acanthochromis_polyacanthus
ENSVPAG00000005902	PUM1	92	99.627	ENSAMEG00000017656	PUM1	90	99.627	Ailuropoda_melanoleuca
ENSVPAG00000005902	PUM1	92	81.807	ENSACIG00000021013	pum1	92	83.827	Amphilophus_citrinellus
ENSVPAG00000005902	PUM1	92	81.807	ENSAOCG00000003944	pum1	92	83.951	Amphiprion_ocellaris
ENSVPAG00000005902	PUM1	92	81.807	ENSAPEG00000014550	pum1	92	83.951	Amphiprion_percula
ENSVPAG00000005902	PUM1	92	81.807	ENSATEG00000016004	pum1	91	91.084	Anabas_testudineus
ENSVPAG00000005902	PUM1	92	98.507	ENSAPLG00000009351	PUM1	92	98.507	Anas_platyrhynchos
ENSVPAG00000005902	PUM1	92	97.011	ENSACAG00000000682	PUM1	91	97.011	Anolis_carolinensis
ENSVPAG00000005902	PUM1	92	99.661	ENSANAG00000027865	PUM1	100	99.306	Aotus_nancymaae
ENSVPAG00000005902	PUM1	82	81.559	ENSACLG00000019354	pum1	92	83.704	Astatotilapia_calliptera
ENSVPAG00000005902	PUM1	92	84.988	ENSAMXG00000020607	pum1	90	84.864	Astyanax_mexicanus
ENSVPAG00000005902	PUM1	92	99.661	ENSBTAG00000018979	PUM1	100	99.306	Bos_taurus
ENSVPAG00000005902	PUM1	92	99.661	ENSCJAG00000006035	PUM1	100	99.306	Callithrix_jacchus
ENSVPAG00000005902	PUM1	92	98.983	ENSCAFG00000011205	PUM1	92	98.983	Canis_familiaris
ENSVPAG00000005902	PUM1	84	99.257	ENSCAFG00020024616	PUM1	98	99.502	Canis_lupus_dingo
ENSVPAG00000005902	PUM1	92	99.661	ENSCHIG00000012952	PUM1	92	99.661	Capra_hircus
ENSVPAG00000005902	PUM1	92	99.322	ENSTSYG00000008868	PUM1	100	99.004	Carlito_syrichta
ENSVPAG00000005902	PUM1	92	99.005	ENSCPOG00000031613	PUM1	100	98.755	Cavia_porcellus
ENSVPAG00000005902	PUM1	92	99.661	ENSCATG00000017991	PUM1	100	99.306	Cercocebus_atys
ENSVPAG00000005902	PUM1	92	99.322	ENSCLAG00000007662	PUM1	100	98.755	Chinchilla_lanigera
ENSVPAG00000005902	PUM1	92	99.661	ENSCSAG00000001028	PUM1	93	99.661	Chlorocebus_sabaeus
ENSVPAG00000005902	PUM1	86	95.973	ENSCHOG00000010245	PUM1	86	95.973	Choloepus_hoffmanni
ENSVPAG00000005902	PUM1	92	98.381	ENSCPBG00000009288	PUM1	100	98.007	Chrysemys_picta_bellii
ENSVPAG00000005902	PUM1	92	99.664	ENSCANG00000042606	PUM1	100	99.306	Colobus_angolensis_palliatus
ENSVPAG00000005902	PUM1	92	98.983	ENSCGRG00001024949	Pum1	100	98.611	Cricetulus_griseus_chok1gshd
ENSVPAG00000005902	PUM1	92	98.983	ENSCGRG00000014197	Pum1	100	98.611	Cricetulus_griseus_crigri
ENSVPAG00000005902	PUM1	82	81.088	ENSCSEG00000015981	pum1	92	82.099	Cynoglossus_semilaevis
ENSVPAG00000005902	PUM1	92	81.312	ENSCVAG00000007043	pum1	92	83.457	Cyprinodon_variegatus
ENSVPAG00000005902	PUM1	92	85.484	ENSDARG00000099256	pum1	93	85.980	Danio_rerio
ENSVPAG00000005902	PUM1	92	99.661	ENSDNOG00000010939	PUM1	92	99.661	Dasypus_novemcinctus
ENSVPAG00000005902	PUM1	77	98.830	ENSDORG00000001875	Pum1	91	98.830	Dipodomys_ordii
ENSVPAG00000005902	PUM1	80	98.276	ENSETEG00000004355	PUM1	79	98.276	Echinops_telfairi
ENSVPAG00000005902	PUM1	92	99.502	ENSEASG00005010813	PUM1	92	99.502	Equus_asinus_asinus
ENSVPAG00000005902	PUM1	92	99.502	ENSECAG00000021369	PUM1	98	99.502	Equus_caballus
ENSVPAG00000005902	PUM1	76	100.000	ENSEEUG00000003871	PUM1	75	100.000	Erinaceus_europaeus
ENSVPAG00000005902	PUM1	92	84.088	ENSELUG00000002409	pum1	100	83.911	Esox_lucius
ENSVPAG00000005902	PUM1	92	99.751	ENSFCAG00000010374	PUM1	100	99.583	Felis_catus
ENSVPAG00000005902	PUM1	92	97.157	ENSFALG00000001214	PUM1	90	97.157	Ficedula_albicollis
ENSVPAG00000005902	PUM1	92	99.322	ENSFDAG00000011319	PUM1	100	98.630	Fukomys_damarensis
ENSVPAG00000005902	PUM1	69	88.973	ENSGMOG00000010491	pum1	93	82.165	Gadus_morhua
ENSVPAG00000005902	PUM1	92	98.756	ENSGALG00000042598	PUM1	92	98.756	Gallus_gallus
ENSVPAG00000005902	PUM1	92	81.436	ENSGAFG00000015617	pum1	92	83.210	Gambusia_affinis
ENSVPAG00000005902	PUM1	92	81.527	ENSGACG00000005717	pum1	93	83.538	Gasterosteus_aculeatus
ENSVPAG00000005902	PUM1	92	98.259	ENSGAGG00000001290	PUM1	92	98.259	Gopherus_agassizii
ENSVPAG00000005902	PUM1	92	99.664	ENSGGOG00000011983	PUM1	100	99.306	Gorilla_gorilla
ENSVPAG00000005902	PUM1	92	81.559	ENSHBUG00000018718	pum1	92	83.704	Haplochromis_burtoni
ENSVPAG00000005902	PUM1	92	98.983	ENSHGLG00000013819	Pum1	100	98.506	Heterocephalus_glaber_female
ENSVPAG00000005902	PUM1	92	98.983	ENSHGLG00100008621	Pum1	100	98.506	Heterocephalus_glaber_male
ENSVPAG00000005902	PUM1	82	79.481	ENSHCOG00000005149	pum1	52	93.923	Hippocampus_comes
ENSVPAG00000005902	PUM1	92	83.251	ENSIPUG00000020421	pum1	93	83.764	Ictalurus_punctatus
ENSVPAG00000005902	PUM1	92	99.661	ENSSTOG00000010757	PUM1	100	99.306	Ictidomys_tridecemlineatus
ENSVPAG00000005902	PUM1	92	99.661	ENSJJAG00000000530	Pum1	100	99.306	Jaculus_jaculus
ENSVPAG00000005902	PUM1	92	80.941	ENSKMAG00000003481	pum1	92	83.086	Kryptolebias_marmoratus
ENSVPAG00000005902	PUM1	92	80.917	ENSLBEG00000002527	pum1	92	82.942	Labrus_bergylta
ENSVPAG00000005902	PUM1	92	89.343	ENSLACG00000017188	PUM1	92	89.343	Latimeria_chalumnae
ENSVPAG00000005902	PUM1	92	92.174	ENSLOCG00000005210	pum1	92	92.422	Lepisosteus_oculatus
ENSVPAG00000005902	PUM1	92	98.881	ENSLAFG00000003178	PUM1	92	98.881	Loxodonta_africana
ENSVPAG00000005902	PUM1	92	99.661	ENSMFAG00000010291	PUM1	100	99.306	Macaca_fascicularis
ENSVPAG00000005902	PUM1	92	99.661	ENSMMUG00000013520	PUM1	100	99.306	Macaca_mulatta
ENSVPAG00000005902	PUM1	92	99.661	ENSMNEG00000034639	PUM1	100	99.306	Macaca_nemestrina
ENSVPAG00000005902	PUM1	92	99.664	ENSMLEG00000038743	PUM1	100	99.306	Mandrillus_leucophaeus
ENSVPAG00000005902	PUM1	92	81.559	ENSMAMG00000011606	pum1	92	83.580	Mastacembelus_armatus
ENSVPAG00000005902	PUM1	92	81.559	ENSMZEG00005005834	pum1	92	83.704	Maylandia_zebra
ENSVPAG00000005902	PUM1	92	98.383	ENSMGAG00000000724	PUM1	92	98.383	Meleagris_gallopavo
ENSVPAG00000005902	PUM1	92	98.983	ENSMAUG00000022090	Pum1	100	98.630	Mesocricetus_auratus
ENSVPAG00000005902	PUM1	92	99.378	ENSMICG00000007713	-	100	99.128	Microcebus_murinus
ENSVPAG00000005902	PUM1	92	96.970	ENSMICG00000012213	-	92	97.966	Microcebus_murinus
ENSVPAG00000005902	PUM1	92	98.983	ENSMOCG00000015463	Pum1	100	98.506	Microtus_ochrogaster
ENSVPAG00000005902	PUM1	77	88.276	ENSMMOG00000019817	pum1	89	90.843	Mola_mola
ENSVPAG00000005902	PUM1	92	98.134	ENSMODG00000017067	PUM1	92	98.134	Monodelphis_domestica
ENSVPAG00000005902	PUM1	82	88.506	ENSMALG00000016399	pum1	91	91.084	Monopterus_albus
ENSVPAG00000005902	PUM1	92	98.983	MGP_CAROLIEiJ_G0026549	Pum1	100	98.257	Mus_caroli
ENSVPAG00000005902	PUM1	92	99.322	ENSMUSG00000028580	Pum1	100	98.611	Mus_musculus
ENSVPAG00000005902	PUM1	92	98.983	MGP_PahariEiJ_G0028881	Pum1	100	98.611	Mus_pahari
ENSVPAG00000005902	PUM1	92	99.322	MGP_SPRETEiJ_G0027529	Pum1	100	98.611	Mus_spretus
ENSVPAG00000005902	PUM1	92	99.377	ENSMPUG00000015454	PUM1	92	99.377	Mustela_putorius_furo
ENSVPAG00000005902	PUM1	92	99.322	ENSMLUG00000006490	PUM1	92	99.322	Myotis_lucifugus
ENSVPAG00000005902	PUM1	92	99.626	ENSNGAG00000002378	Pum1	100	99.253	Nannospalax_galili
ENSVPAG00000005902	PUM1	80	81.436	ENSNBRG00000010689	pum1	100	83.580	Neolamprologus_brichardi
ENSVPAG00000005902	PUM1	92	99.329	ENSNLEG00000001151	PUM1	100	98.611	Nomascus_leucogenys
ENSVPAG00000005902	PUM1	76	100.000	ENSMEUG00000000976	-	75	97.297	Notamacropus_eugenii
ENSVPAG00000005902	PUM1	76	99.329	ENSOPRG00000001776	PUM1	65	99.329	Ochotona_princeps
ENSVPAG00000005902	PUM1	92	99.004	ENSODEG00000003465	PUM1	100	98.630	Octodon_degus
ENSVPAG00000005902	PUM1	92	82.108	ENSONIG00000002290	pum1	92	83.951	Oreochromis_niloticus
ENSVPAG00000005902	PUM1	72	91.304	ENSOANG00000004902	-	89	91.304	Ornithorhynchus_anatinus
ENSVPAG00000005902	PUM1	92	98.983	ENSOCUG00000008641	PUM1	92	98.983	Oryctolagus_cuniculus
ENSVPAG00000005902	PUM1	92	82.426	ENSORLG00000011482	pum1	92	83.580	Oryzias_latipes
ENSVPAG00000005902	PUM1	92	82.550	ENSORLG00020019461	pum1	92	83.580	Oryzias_latipes_hni
ENSVPAG00000005902	PUM1	92	82.550	ENSORLG00015011375	pum1	92	83.704	Oryzias_latipes_hsok
ENSVPAG00000005902	PUM1	82	92.771	ENSOMEG00000009312	pum1	93	77.027	Oryzias_melastigma
ENSVPAG00000005902	PUM1	92	99.322	ENSOGAG00000011063	PUM1	92	99.322	Otolemur_garnettii
ENSVPAG00000005902	PUM1	92	99.661	ENSOARG00000001899	PUM1	92	99.661	Ovis_aries
ENSVPAG00000005902	PUM1	92	99.664	ENSPPAG00000044003	PUM1	100	99.306	Pan_paniscus
ENSVPAG00000005902	PUM1	92	99.875	ENSPPRG00000001370	PUM1	100	99.502	Panthera_pardus
ENSVPAG00000005902	PUM1	92	99.664	ENSPTIG00000010798	PUM1	100	99.306	Panthera_tigris_altaica
ENSVPAG00000005902	PUM1	92	99.664	ENSPTRG00000000453	PUM1	100	99.306	Pan_troglodytes
ENSVPAG00000005902	PUM1	92	99.661	ENSPANG00000016338	PUM1	100	99.306	Papio_anubis
ENSVPAG00000005902	PUM1	92	83.109	ENSPKIG00000010578	pum1	92	82.619	Paramormyrops_kingsleyae
ENSVPAG00000005902	PUM1	92	98.630	ENSPSIG00000014118	PUM1	92	98.630	Pelodiscus_sinensis
ENSVPAG00000005902	PUM1	80	79.779	ENSPMGG00000005836	pum1	100	82.029	Periophthalmus_magnuspinnatus
ENSVPAG00000005902	PUM1	92	99.322	ENSPEMG00000010009	Pum1	100	98.630	Peromyscus_maniculatus_bairdii
ENSVPAG00000005902	PUM1	92	98.383	ENSPCIG00000014151	PUM1	100	98.381	Phascolarctos_cinereus
ENSVPAG00000005902	PUM1	87	84.236	ENSPFOG00000007289	pum1	99	82.569	Poecilia_formosa
ENSVPAG00000005902	PUM1	92	83.333	ENSPLAG00000007256	pum1	93	83.580	Poecilia_latipinna
ENSVPAG00000005902	PUM1	82	83.457	ENSPMEG00000019543	pum1	91	83.704	Poecilia_mexicana
ENSVPAG00000005902	PUM1	92	81.436	ENSPREG00000005195	pum1	100	81.091	Poecilia_reticulata
ENSVPAG00000005902	PUM1	92	99.661	ENSPPYG00000001621	PUM1	91	99.661	Pongo_abelii
ENSVPAG00000005902	PUM1	69	100.000	ENSPCAG00000001979	PUM1	66	100.000	Procavia_capensis
ENSVPAG00000005902	PUM1	92	99.378	ENSPCOG00000004398	PUM1	100	99.128	Propithecus_coquereli
ENSVPAG00000005902	PUM1	92	99.664	ENSPVAG00000005207	PUM1	90	99.664	Pteropus_vampyrus
ENSVPAG00000005902	PUM1	92	81.559	ENSPNYG00000009518	pum1	92	83.704	Pundamilia_nyererei
ENSVPAG00000005902	PUM1	92	85.236	ENSPNAG00000026728	pum1	93	85.112	Pygocentrus_nattereri
ENSVPAG00000005902	PUM1	92	98.983	ENSRNOG00000011709	Pum1	92	98.983	Rattus_norvegicus
ENSVPAG00000005902	PUM1	92	99.664	ENSRBIG00000042521	PUM1	100	99.306	Rhinopithecus_bieti
ENSVPAG00000005902	PUM1	92	99.664	ENSRROG00000020156	PUM1	100	99.306	Rhinopithecus_roxellana
ENSVPAG00000005902	PUM1	92	99.751	ENSSBOG00000032037	PUM1	100	99.377	Saimiri_boliviensis_boliviensis
ENSVPAG00000005902	PUM1	92	98.134	ENSSHAG00000010918	PUM1	92	98.134	Sarcophilus_harrisii
ENSVPAG00000005902	PUM1	92	81.559	ENSSMAG00000010918	pum1	91	91.084	Scophthalmus_maximus
ENSVPAG00000005902	PUM1	92	81.683	ENSSDUG00000009021	pum1	92	83.827	Seriola_dumerili
ENSVPAG00000005902	PUM1	88	81.683	ENSSLDG00000009667	pum1	92	83.827	Seriola_lalandi_dorsalis
ENSVPAG00000005902	PUM1	86	99.621	ENSSARG00000003055	PUM1	83	99.621	Sorex_araneus
ENSVPAG00000005902	PUM1	92	98.506	ENSSPUG00000006267	PUM1	92	98.506	Sphenodon_punctatus
ENSVPAG00000005902	PUM1	92	81.807	ENSSPAG00000016636	pum1	92	83.951	Stegastes_partitus
ENSVPAG00000005902	PUM1	92	99.876	ENSSSCG00000003591	PUM1	100	99.626	Sus_scrofa
ENSVPAG00000005902	PUM1	92	81.559	ENSTRUG00000013121	pum1	100	83.210	Takifugu_rubripes
ENSVPAG00000005902	PUM1	92	81.335	ENSTNIG00000016983	pum1	92	83.354	Tetraodon_nigroviridis
ENSVPAG00000005902	PUM1	80	98.658	ENSTBEG00000013810	PUM1	81	98.658	Tupaia_belangeri
ENSVPAG00000005902	PUM1	84	99.626	ENSTTRG00000007436	PUM1	82	99.626	Tursiops_truncatus
ENSVPAG00000005902	PUM1	91	99.142	ENSUAMG00000018262	-	92	99.142	Ursus_americanus
ENSVPAG00000005902	PUM1	87	100.000	ENSUMAG00000009211	PUM1	92	100.000	Ursus_maritimus
ENSVPAG00000005902	PUM1	92	99.751	ENSVVUG00000014631	PUM1	92	100.000	Vulpes_vulpes
ENSVPAG00000005902	PUM1	92	89.193	ENSXETG00000012904	pum1	92	89.193	Xenopus_tropicalis
ENSVPAG00000005902	PUM1	92	81.436	ENSXMAG00000002945	pum1	92	83.333	Xiphophorus_maculatus