EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000006063 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 64846 bases
Position: chrGeneScaffold_2875:49902-114747
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005625	RRM_4	PF10598.9	1.6e-48	1	1
ENSVPAP00000005625	U5_2-snRNA_bdg	PF10597.9	2.2e-49	1	1
ENSVPAP00000005625	PRO8NT	PF08082.11	2.4e-27	1	1
ENSVPAP00000005625	U6-snRNA_bdg	PF10596.9	4e-61	1	1
ENSVPAP00000005625	PROCN	PF08083.11	1.3e-83	1	1
ENSVPAP00000005625	PRP8_domainIV	PF12134.8	1.1e-63	1	2
ENSVPAP00000005625	PRP8_domainIV	PF12134.8	1.1e-63	2	2
ENSVPAP00000005625	PROCT	PF08084.11	6.8e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006065	-	6978	-	ENSVPAP00000005625	2325 (aa)	-	UPI00018BC9A1

Gene Model

Click here to download ENSVPAG00000006063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006063	-	71	99.505	ENSG00000174231	PRPF8	71	99.505	Homo_sapiens
ENSVPAG00000006063	-	71	98.621	ENSAPOG00000010079	prpf8	71	98.621	Acanthochromis_polyacanthus
ENSVPAG00000006063	-	71	99.505	ENSAMEG00000007940	PRPF8	71	99.505	Ailuropoda_melanoleuca
ENSVPAG00000006063	-	71	98.621	ENSACIG00000018280	prpf8	71	98.621	Amphilophus_citrinellus
ENSVPAG00000006063	-	71	98.621	ENSAOCG00000010725	prpf8	71	98.621	Amphiprion_ocellaris
ENSVPAG00000006063	-	71	98.621	ENSAPEG00000014397	prpf8	71	98.621	Amphiprion_percula
ENSVPAG00000006063	-	71	98.621	ENSATEG00000010062	prpf8	71	98.621	Anabas_testudineus
ENSVPAG00000006063	-	67	99.310	ENSAPLG00000010357	PRPF8	70	99.310	Anas_platyrhynchos
ENSVPAG00000006063	-	54	99.310	ENSACAG00000014784	PRPF8	65	99.310	Anolis_carolinensis
ENSVPAG00000006063	-	71	99.505	ENSANAG00000032629	PRPF8	71	99.505	Aotus_nancymaae
ENSVPAG00000006063	-	71	98.621	ENSACLG00000020858	prpf8	71	98.621	Astatotilapia_calliptera
ENSVPAG00000006063	-	71	98.621	ENSAMXG00000020291	prpf8	71	98.621	Astyanax_mexicanus
ENSVPAG00000006063	-	71	99.505	ENSBTAG00000011488	PRPF8	71	99.505	Bos_taurus
ENSVPAG00000006063	-	67	93.103	WBGene00004187	prp-8	67	93.103	Caenorhabditis_elegans
ENSVPAG00000006063	-	71	99.505	ENSCJAG00000001911	PRPF8	71	99.505	Callithrix_jacchus
ENSVPAG00000006063	-	71	99.505	ENSCAFG00000019221	PRPF8	71	99.505	Canis_familiaris
ENSVPAG00000006063	-	67	100.000	ENSCAFG00020009943	PRPF8	70	100.000	Canis_lupus_dingo
ENSVPAG00000006063	-	71	99.505	ENSCHIG00000017499	PRPF8	71	99.505	Capra_hircus
ENSVPAG00000006063	-	71	99.505	ENSTSYG00000014120	PRPF8	71	99.505	Carlito_syrichta
ENSVPAG00000006063	-	67	100.000	ENSCAPG00000009459	PRPF8	70	100.000	Cavia_aperea
ENSVPAG00000006063	-	71	99.505	ENSCPOG00000010379	PRPF8	71	99.505	Cavia_porcellus
ENSVPAG00000006063	-	71	99.505	ENSCCAG00000031983	-	71	99.505	Cebus_capucinus
ENSVPAG00000006063	-	71	99.505	ENSCATG00000038595	PRPF8	71	99.505	Cercocebus_atys
ENSVPAG00000006063	-	71	99.505	ENSCLAG00000004388	PRPF8	71	99.505	Chinchilla_lanigera
ENSVPAG00000006063	-	71	99.505	ENSCSAG00000013929	PRPF8	71	99.505	Chlorocebus_sabaeus
ENSVPAG00000006063	-	56	98.000	ENSCHOG00000008590	PRPF8	61	98.000	Choloepus_hoffmanni
ENSVPAG00000006063	-	71	99.310	ENSCPBG00000020409	PRPF8	71	99.310	Chrysemys_picta_bellii
ENSVPAG00000006063	-	67	97.241	ENSCSAVG00000007825	-	100	89.583	Ciona_savignyi
ENSVPAG00000006063	-	71	99.505	ENSCANG00000043088	PRPF8	71	99.505	Colobus_angolensis_palliatus
ENSVPAG00000006063	-	54	99.310	ENSCGRG00000005129	Prpf8	74	99.310	Cricetulus_griseus_crigri
ENSVPAG00000006063	-	71	97.931	ENSCSEG00000007905	prpf8	71	97.931	Cynoglossus_semilaevis
ENSVPAG00000006063	-	71	98.621	ENSDARG00000026180	prpf8	71	98.621	Danio_rerio
ENSVPAG00000006063	-	64	99.585	ENSDNOG00000018471	PRPF8	68	99.585	Dasypus_novemcinctus
ENSVPAG00000006063	-	54	100.000	ENSDORG00000006185	Prpf8	63	100.000	Dipodomys_ordii
ENSVPAG00000006063	-	71	94.483	FBgn0033688	Prp8	69	94.483	Drosophila_melanogaster
ENSVPAG00000006063	-	71	99.310	ENSETEG00000017592	PRPF8	71	99.310	Echinops_telfairi
ENSVPAG00000006063	-	67	97.241	ENSEBUG00000006548	prpf8	67	97.241	Eptatretus_burgeri
ENSVPAG00000006063	-	71	99.505	ENSEASG00005009514	PRPF8	73	99.505	Equus_asinus_asinus
ENSVPAG00000006063	-	67	100.000	ENSECAG00000021318	PRPF8	69	100.000	Equus_caballus
ENSVPAG00000006063	-	69	97.931	ENSELUG00000007120	prpf8	70	97.931	Esox_lucius
ENSVPAG00000006063	-	71	99.505	ENSFCAG00000006297	PRPF8	71	99.505	Felis_catus
ENSVPAG00000006063	-	71	99.310	ENSFALG00000006628	PRPF8	71	99.310	Ficedula_albicollis
ENSVPAG00000006063	-	71	99.505	ENSFDAG00000004711	PRPF8	71	99.505	Fukomys_damarensis
ENSVPAG00000006063	-	71	97.561	ENSFHEG00000021084	prpf8	71	97.561	Fundulus_heteroclitus
ENSVPAG00000006063	-	70	97.561	ENSGMOG00000002028	prpf8	71	97.561	Gadus_morhua
ENSVPAG00000006063	-	71	99.310	ENSGALG00000002943	PRPF8	71	99.310	Gallus_gallus
ENSVPAG00000006063	-	70	97.561	ENSGAFG00000010337	prpf8	71	97.561	Gambusia_affinis
ENSVPAG00000006063	-	71	97.931	ENSGACG00000008504	prpf8	71	97.931	Gasterosteus_aculeatus
ENSVPAG00000006063	-	71	99.310	ENSGAGG00000008350	PRPF8	71	99.310	Gopherus_agassizii
ENSVPAG00000006063	-	71	99.505	ENSGGOG00000005516	PRPF8	71	99.505	Gorilla_gorilla
ENSVPAG00000006063	-	71	98.621	ENSHBUG00000016192	prpf8	71	98.621	Haplochromis_burtoni
ENSVPAG00000006063	-	71	99.505	ENSHGLG00000012029	PRPF8	71	99.505	Heterocephalus_glaber_female
ENSVPAG00000006063	-	71	99.505	ENSHGLG00100016494	PRPF8	71	99.505	Heterocephalus_glaber_male
ENSVPAG00000006063	-	71	98.621	ENSHCOG00000016414	prpf8	71	98.621	Hippocampus_comes
ENSVPAG00000006063	-	71	97.931	ENSIPUG00000023230	prpf8	71	97.931	Ictalurus_punctatus
ENSVPAG00000006063	-	71	99.505	ENSSTOG00000005128	PRPF8	71	99.505	Ictidomys_tridecemlineatus
ENSVPAG00000006063	-	71	99.310	ENSJJAG00000021159	Prpf8	71	99.310	Jaculus_jaculus
ENSVPAG00000006063	-	70	98.621	ENSKMAG00000016118	prpf8	70	98.621	Kryptolebias_marmoratus
ENSVPAG00000006063	-	71	97.931	ENSLBEG00000026903	prpf8	71	97.931	Labrus_bergylta
ENSVPAG00000006063	-	61	97.931	ENSLACG00000010479	PRPF8	67	98.596	Latimeria_chalumnae
ENSVPAG00000006063	-	71	98.621	ENSLOCG00000005409	prpf8	71	98.621	Lepisosteus_oculatus
ENSVPAG00000006063	-	71	99.505	ENSLAFG00000015445	PRPF8	71	99.505	Loxodonta_africana
ENSVPAG00000006063	-	71	99.505	ENSMFAG00000039995	PRPF8	71	99.505	Macaca_fascicularis
ENSVPAG00000006063	-	71	99.505	ENSMMUG00000004820	PRPF8	71	99.505	Macaca_mulatta
ENSVPAG00000006063	-	71	99.505	ENSMNEG00000035713	PRPF8	71	99.505	Macaca_nemestrina
ENSVPAG00000006063	-	71	99.505	ENSMLEG00000037937	PRPF8	71	99.505	Mandrillus_leucophaeus
ENSVPAG00000006063	-	71	98.621	ENSMAMG00000008919	prpf8	71	98.621	Mastacembelus_armatus
ENSVPAG00000006063	-	71	98.621	ENSMZEG00005015073	prpf8	71	98.621	Maylandia_zebra
ENSVPAG00000006063	-	71	99.310	ENSMGAG00000004769	PRPF8	71	99.310	Meleagris_gallopavo
ENSVPAG00000006063	-	71	99.310	ENSMICG00000010320	PRPF8	71	99.310	Microcebus_murinus
ENSVPAG00000006063	-	71	99.310	ENSMOCG00000016838	Prpf8	71	99.310	Microtus_ochrogaster
ENSVPAG00000006063	-	71	97.931	ENSMMOG00000011887	prpf8	72	97.931	Mola_mola
ENSVPAG00000006063	-	71	99.310	ENSMODG00000010480	PRPF8	71	99.310	Monodelphis_domestica
ENSVPAG00000006063	-	71	97.931	ENSMALG00000003558	prpf8	74	97.931	Monopterus_albus
ENSVPAG00000006063	-	71	99.310	MGP_CAROLIEiJ_G0016740	Prpf8	71	99.310	Mus_caroli
ENSVPAG00000006063	-	71	99.310	ENSMUSG00000020850	Prpf8	71	99.310	Mus_musculus
ENSVPAG00000006063	-	71	99.310	MGP_PahariEiJ_G0017877	Prpf8	71	99.310	Mus_pahari
ENSVPAG00000006063	-	71	99.310	MGP_SPRETEiJ_G0017583	Prpf8	71	99.310	Mus_spretus
ENSVPAG00000006063	-	71	99.505	ENSMPUG00000013227	PRPF8	71	99.505	Mustela_putorius_furo
ENSVPAG00000006063	-	71	99.310	ENSMLUG00000002666	PRPF8	71	99.310	Myotis_lucifugus
ENSVPAG00000006063	-	71	99.310	ENSNGAG00000005305	Prpf8	71	99.310	Nannospalax_galili
ENSVPAG00000006063	-	71	98.621	ENSNBRG00000013127	prpf8	71	98.621	Neolamprologus_brichardi
ENSVPAG00000006063	-	69	99.310	ENSNLEG00000000897	PRPF8	70	99.310	Nomascus_leucogenys
ENSVPAG00000006063	-	67	100.000	ENSMEUG00000015999	PRPF8	68	100.000	Notamacropus_eugenii
ENSVPAG00000006063	-	69	100.000	ENSOPRG00000003102	PRPF8	69	100.000	Ochotona_princeps
ENSVPAG00000006063	-	71	99.505	ENSODEG00000008468	PRPF8	71	99.505	Octodon_degus
ENSVPAG00000006063	-	71	98.621	ENSONIG00000008153	prpf8	71	98.621	Oreochromis_niloticus
ENSVPAG00000006063	-	58	99.310	ENSOANG00000004250	PRPF8	69	99.310	Ornithorhynchus_anatinus
ENSVPAG00000006063	-	71	99.505	ENSOCUG00000000081	PRPF8	71	99.505	Oryctolagus_cuniculus
ENSVPAG00000006063	-	70	97.931	ENSORLG00000008036	prpf8	71	97.931	Oryzias_latipes
ENSVPAG00000006063	-	70	97.931	ENSORLG00020021070	prpf8	71	97.931	Oryzias_latipes_hni
ENSVPAG00000006063	-	70	97.931	ENSORLG00015002340	prpf8	71	97.931	Oryzias_latipes_hsok
ENSVPAG00000006063	-	70	98.621	ENSOMEG00000016866	prpf8	70	98.621	Oryzias_melastigma
ENSVPAG00000006063	-	71	99.505	ENSOARG00000013312	PRPF8	71	99.505	Ovis_aries
ENSVPAG00000006063	-	71	99.505	ENSPPAG00000042753	PRPF8	71	99.505	Pan_paniscus
ENSVPAG00000006063	-	71	99.505	ENSPPRG00000008746	PRPF8	71	99.505	Panthera_pardus
ENSVPAG00000006063	-	71	99.505	ENSPTIG00000019200	PRPF8	71	99.505	Panthera_tigris_altaica
ENSVPAG00000006063	-	71	99.505	ENSPTRG00000039576	PRPF8	71	99.505	Pan_troglodytes
ENSVPAG00000006063	-	67	100.000	ENSPANG00000024607	PRPF8	67	100.000	Papio_anubis
ENSVPAG00000006063	-	71	98.621	ENSPKIG00000011201	prpf8	71	98.621	Paramormyrops_kingsleyae
ENSVPAG00000006063	-	71	99.310	ENSPSIG00000013393	PRPF8	71	99.310	Pelodiscus_sinensis
ENSVPAG00000006063	-	71	99.310	ENSPEMG00000021699	Prpf8	71	99.310	Peromyscus_maniculatus_bairdii
ENSVPAG00000006063	-	67	98.621	ENSPMAG00000005438	prpf8	70	98.621	Petromyzon_marinus
ENSVPAG00000006063	-	71	99.310	ENSPCIG00000022603	PRPF8	71	99.310	Phascolarctos_cinereus
ENSVPAG00000006063	-	70	97.931	ENSPFOG00000007005	prpf8	71	97.931	Poecilia_formosa
ENSVPAG00000006063	-	71	97.561	ENSPLAG00000020777	prpf8	71	97.561	Poecilia_latipinna
ENSVPAG00000006063	-	71	97.561	ENSPMEG00000004051	prpf8	71	97.931	Poecilia_mexicana
ENSVPAG00000006063	-	71	97.931	ENSPREG00000021902	prpf8	71	97.931	Poecilia_reticulata
ENSVPAG00000006063	-	71	99.505	ENSPPYG00000007777	PRPF8	71	99.505	Pongo_abelii
ENSVPAG00000006063	-	64	100.000	ENSPCAG00000008938	PRPF8	64	100.000	Procavia_capensis
ENSVPAG00000006063	-	71	99.310	ENSPCOG00000015182	PRPF8	71	99.310	Propithecus_coquereli
ENSVPAG00000006063	-	66	99.310	ENSPVAG00000002134	PRPF8	66	99.310	Pteropus_vampyrus
ENSVPAG00000006063	-	71	98.621	ENSPNYG00000016356	prpf8	71	98.621	Pundamilia_nyererei
ENSVPAG00000006063	-	71	98.621	ENSPNAG00000009247	prpf8	71	98.621	Pygocentrus_nattereri
ENSVPAG00000006063	-	71	99.310	ENSRNOG00000003495	Prpf8	71	99.310	Rattus_norvegicus
ENSVPAG00000006063	-	71	99.505	ENSRBIG00000031219	PRPF8	71	99.505	Rhinopithecus_bieti
ENSVPAG00000006063	-	71	99.505	ENSRROG00000038014	PRPF8	71	99.505	Rhinopithecus_roxellana
ENSVPAG00000006063	-	66	75.694	YHR165C	PRP8	64	75.694	Saccharomyces_cerevisiae
ENSVPAG00000006063	-	71	99.505	ENSSBOG00000029717	PRPF8	71	99.505	Saimiri_boliviensis_boliviensis
ENSVPAG00000006063	-	71	99.310	ENSSHAG00000006167	PRPF8	71	99.310	Sarcophilus_harrisii
ENSVPAG00000006063	-	71	98.621	ENSSFOG00015013905	prpf8	71	98.621	Scleropages_formosus
ENSVPAG00000006063	-	71	97.931	ENSSMAG00000017736	prpf8	72	97.931	Scophthalmus_maximus
ENSVPAG00000006063	-	71	98.621	ENSSDUG00000003029	prpf8	71	98.621	Seriola_dumerili
ENSVPAG00000006063	-	57	97.030	ENSSLDG00000017096	prpf8	83	97.030	Seriola_lalandi_dorsalis
ENSVPAG00000006063	-	64	99.310	ENSSARG00000002892	PRPF8	64	99.310	Sorex_araneus
ENSVPAG00000006063	-	71	99.310	ENSSPUG00000007463	PRPF8	71	99.310	Sphenodon_punctatus
ENSVPAG00000006063	-	71	98.621	ENSSPAG00000015639	prpf8	71	98.621	Stegastes_partitus
ENSVPAG00000006063	-	71	99.505	ENSSSCG00000017817	PRPF8	71	99.505	Sus_scrofa
ENSVPAG00000006063	-	71	99.310	ENSTGUG00000005648	-	71	99.310	Taeniopygia_guttata
ENSVPAG00000006063	-	71	97.931	ENSTRUG00000015906	prpf8	71	97.931	Takifugu_rubripes
ENSVPAG00000006063	-	64	100.000	ENSTNIG00000003460	prpf8	71	98.333	Tetraodon_nigroviridis
ENSVPAG00000006063	-	69	99.310	ENSTBEG00000006431	PRPF8	69	99.310	Tupaia_belangeri
ENSVPAG00000006063	-	71	99.505	ENSTTRG00000006869	PRPF8	71	99.505	Tursiops_truncatus
ENSVPAG00000006063	-	71	99.505	ENSUMAG00000009385	PRPF8	71	99.505	Ursus_maritimus
ENSVPAG00000006063	-	71	99.505	ENSVVUG00000021695	PRPF8	70	99.505	Vulpes_vulpes
ENSVPAG00000006063	-	71	99.310	ENSXETG00000022259	prpf8	71	99.310	Xenopus_tropicalis
ENSVPAG00000006063	-	71	97.931	ENSXCOG00000012775	prpf8	71	97.931	Xiphophorus_couchianus
ENSVPAG00000006063	-	71	97.931	ENSXMAG00000008505	prpf8	71	97.931	Xiphophorus_maculatus