EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000006130 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 43276 bases
Position: chrGeneScaffold_3488:250497-293772
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005685	DND1_DSRM	PF14709.7	8.1e-22	1	1
ENSVPAP00000005685	RRM_1	PF00076.22	8.4e-34	1	3
ENSVPAP00000005685	RRM_1	PF00076.22	8.4e-34	2	3
ENSVPAP00000005685	RRM_1	PF00076.22	8.4e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006130	A1CF-201	1788	-	ENSVPAP00000005685	595 (aa)	-	UPI00018BE80E

Gene Model

Click here to download ENSVPAG00000006130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006130	A1CF	99	81.926	ENSG00000148584	A1CF	99	81.926	Homo_sapiens
ENSVPAG00000006130	A1CF	86	70.769	ENSAPOG00000008259	a1cf	86	70.769	Acanthochromis_polyacanthus
ENSVPAG00000006130	A1CF	86	89.060	ENSAMEG00000000523	A1CF	87	89.251	Ailuropoda_melanoleuca
ENSVPAG00000006130	A1CF	86	73.157	ENSACIG00000008632	a1cf	87	74.669	Amphilophus_citrinellus
ENSVPAG00000006130	A1CF	86	71.591	ENSAOCG00000023744	a1cf	76	84.672	Amphiprion_ocellaris
ENSVPAG00000006130	A1CF	86	70.522	ENSAPEG00000009537	a1cf	87	71.455	Amphiprion_percula
ENSVPAG00000006130	A1CF	86	74.388	ENSATEG00000013720	a1cf	87	75.895	Anabas_testudineus
ENSVPAG00000006130	A1CF	86	84.291	ENSAPLG00000002964	A1CF	87	84.291	Anas_platyrhynchos
ENSVPAG00000006130	A1CF	86	81.323	ENSACAG00000015269	A1CF	87	81.323	Anolis_carolinensis
ENSVPAG00000006130	A1CF	99	80.897	ENSANAG00000019974	A1CF	99	80.897	Aotus_nancymaae
ENSVPAG00000006130	A1CF	86	71.834	ENSACLG00000017428	a1cf	86	74.102	Astatotilapia_calliptera
ENSVPAG00000006130	A1CF	86	75.522	ENSAMXG00000018180	a1cf	90	75.522	Astyanax_mexicanus
ENSVPAG00000006130	A1CF	86	91.618	ENSBTAG00000021195	A1CF	82	96.840	Bos_taurus
ENSVPAG00000006130	A1CF	86	90.019	ENSCJAG00000005045	A1CF	87	90.019	Callithrix_jacchus
ENSVPAG00000006130	A1CF	86	88.868	ENSCAFG00000015581	A1CF	87	89.060	Canis_familiaris
ENSVPAG00000006130	A1CF	86	88.868	ENSCAFG00020026421	A1CF	98	96.970	Canis_lupus_dingo
ENSVPAG00000006130	A1CF	86	89.443	ENSCHIG00000020411	A1CF	87	89.443	Capra_hircus
ENSVPAG00000006130	A1CF	86	90.448	ENSTSYG00000001755	A1CF	92	90.448	Carlito_syrichta
ENSVPAG00000006130	A1CF	85	95.455	ENSCAPG00000017386	A1CF	89	95.455	Cavia_aperea
ENSVPAG00000006130	A1CF	86	88.676	ENSCPOG00000009807	A1CF	87	88.676	Cavia_porcellus
ENSVPAG00000006130	A1CF	86	90.019	ENSCCAG00000018168	A1CF	87	90.019	Cebus_capucinus
ENSVPAG00000006130	A1CF	86	91.033	ENSCATG00000043715	A1CF	87	91.033	Cercocebus_atys
ENSVPAG00000006130	A1CF	86	88.314	ENSCLAG00000010424	A1CF	87	88.314	Chinchilla_lanigera
ENSVPAG00000006130	A1CF	86	89.827	ENSCSAG00000007032	A1CF	87	89.827	Chlorocebus_sabaeus
ENSVPAG00000006130	A1CF	99	80.405	ENSCHOG00000009089	A1CF	86	90.253	Choloepus_hoffmanni
ENSVPAG00000006130	A1CF	86	84.100	ENSCPBG00000026464	A1CF	87	84.100	Chrysemys_picta_bellii
ENSVPAG00000006130	A1CF	86	89.827	ENSCANG00000038032	A1CF	87	89.827	Colobus_angolensis_palliatus
ENSVPAG00000006130	A1CF	86	87.332	ENSCGRG00001017413	A1cf	87	87.332	Cricetulus_griseus_chok1gshd
ENSVPAG00000006130	A1CF	86	87.332	ENSCGRG00000017332	A1cf	87	87.332	Cricetulus_griseus_crigri
ENSVPAG00000006130	A1CF	86	71.619	ENSCSEG00000002361	a1cf	87	72.624	Cynoglossus_semilaevis
ENSVPAG00000006130	A1CF	86	73.070	ENSCVAG00000010520	a1cf	87	74.765	Cyprinodon_variegatus
ENSVPAG00000006130	A1CF	86	75.577	ENSDARG00000002968	a1cf	87	77.115	Danio_rerio
ENSVPAG00000006130	A1CF	86	88.484	ENSDNOG00000002829	A1CF	87	88.484	Dasypus_novemcinctus
ENSVPAG00000006130	A1CF	71	98.578	ENSETEG00000012527	A1CF	71	98.578	Echinops_telfairi
ENSVPAG00000006130	A1CF	86	90.787	ENSEASG00005012924	A1CF	89	90.787	Equus_asinus_asinus
ENSVPAG00000006130	A1CF	86	90.211	ENSECAG00000010424	A1CF	87	90.211	Equus_caballus
ENSVPAG00000006130	A1CF	75	81.839	ENSEEUG00000000013	A1CF	97	81.839	Erinaceus_europaeus
ENSVPAG00000006130	A1CF	86	75.142	ENSELUG00000003159	a1cf	87	76.281	Esox_lucius
ENSVPAG00000006130	A1CF	86	89.669	ENSFCAG00000011179	A1CF	87	89.864	Felis_catus
ENSVPAG00000006130	A1CF	86	84.241	ENSFALG00000013183	A1CF	87	84.241	Ficedula_albicollis
ENSVPAG00000006130	A1CF	86	89.279	ENSFDAG00000019371	A1CF	87	89.279	Fukomys_damarensis
ENSVPAG00000006130	A1CF	86	73.635	ENSFHEG00000019652	a1cf	90	75.330	Fundulus_heteroclitus
ENSVPAG00000006130	A1CF	86	68.421	ENSGMOG00000018943	a1cf	89	68.421	Gadus_morhua
ENSVPAG00000006130	A1CF	86	83.908	ENSGALG00000003765	A1CF	88	83.908	Gallus_gallus
ENSVPAG00000006130	A1CF	86	66.920	ENSGAFG00000014868	a1cf	86	68.061	Gambusia_affinis
ENSVPAG00000006130	A1CF	86	72.316	ENSGACG00000010241	a1cf	89	72.881	Gasterosteus_aculeatus
ENSVPAG00000006130	A1CF	86	83.716	ENSGAGG00000016508	A1CF	89	83.716	Gopherus_agassizii
ENSVPAG00000006130	A1CF	99	80.667	ENSGGOG00000009670	A1CF	99	80.667	Gorilla_gorilla
ENSVPAG00000006130	A1CF	86	72.779	ENSHBUG00000021959	a1cf	87	75.047	Haplochromis_burtoni
ENSVPAG00000006130	A1CF	86	88.484	ENSHGLG00000008955	A1CF	87	88.484	Heterocephalus_glaber_female
ENSVPAG00000006130	A1CF	86	87.716	ENSHGLG00100000518	A1CF	87	87.716	Heterocephalus_glaber_male
ENSVPAG00000006130	A1CF	75	71.459	ENSHCOG00000017669	a1cf	87	68.577	Hippocampus_comes
ENSVPAG00000006130	A1CF	74	80.744	ENSIPUG00000010367	a1cf	82	80.744	Ictalurus_punctatus
ENSVPAG00000006130	A1CF	86	73.321	ENSKMAG00000006568	a1cf	87	74.254	Kryptolebias_marmoratus
ENSVPAG00000006130	A1CF	85	71.375	ENSLBEG00000020994	a1cf	86	73.034	Labrus_bergylta
ENSVPAG00000006130	A1CF	86	79.110	ENSLACG00000008061	A1CF	87	79.110	Latimeria_chalumnae
ENSVPAG00000006130	A1CF	86	77.567	ENSLOCG00000006302	a1cf	87	77.567	Lepisosteus_oculatus
ENSVPAG00000006130	A1CF	86	89.060	ENSLAFG00000015462	A1CF	87	89.060	Loxodonta_africana
ENSVPAG00000006130	A1CF	86	91.033	ENSMFAG00000035948	A1CF	87	91.033	Macaca_fascicularis
ENSVPAG00000006130	A1CF	86	91.033	ENSMMUG00000007077	A1CF	87	91.033	Macaca_mulatta
ENSVPAG00000006130	A1CF	86	90.838	ENSMNEG00000031454	A1CF	87	90.838	Macaca_nemestrina
ENSVPAG00000006130	A1CF	86	89.635	ENSMLEG00000037223	A1CF	87	89.635	Mandrillus_leucophaeus
ENSVPAG00000006130	A1CF	86	70.778	ENSMAMG00000010402	a1cf	87	73.055	Mastacembelus_armatus
ENSVPAG00000006130	A1CF	86	72.952	ENSMZEG00005013245	a1cf	87	74.095	Maylandia_zebra
ENSVPAG00000006130	A1CF	86	83.939	ENSMGAG00000001507	A1CF	87	83.939	Meleagris_gallopavo
ENSVPAG00000006130	A1CF	86	87.140	ENSMAUG00000007422	A1cf	87	87.140	Mesocricetus_auratus
ENSVPAG00000006130	A1CF	86	90.253	ENSMICG00000003377	A1CF	87	90.253	Microcebus_murinus
ENSVPAG00000006130	A1CF	86	87.140	ENSMOCG00000021536	A1cf	87	87.140	Microtus_ochrogaster
ENSVPAG00000006130	A1CF	86	70.968	ENSMMOG00000009422	a1cf	88	72.106	Mola_mola
ENSVPAG00000006130	A1CF	75	89.286	ENSMODG00000016478	A1CF	83	89.286	Monodelphis_domestica
ENSVPAG00000006130	A1CF	86	70.406	ENSMALG00000012992	a1cf	86	70.406	Monopterus_albus
ENSVPAG00000006130	A1CF	86	88.499	MGP_CAROLIEiJ_G0022873	A1cf	87	88.499	Mus_caroli
ENSVPAG00000006130	A1CF	86	88.499	ENSMUSG00000052595	A1cf	99	95.286	Mus_musculus
ENSVPAG00000006130	A1CF	86	88.109	MGP_PahariEiJ_G0014366	A1cf	87	88.109	Mus_pahari
ENSVPAG00000006130	A1CF	86	88.304	MGP_SPRETEiJ_G0023792	A1cf	87	88.304	Mus_spretus
ENSVPAG00000006130	A1CF	83	84.554	ENSMPUG00000016971	A1CF	84	84.752	Mustela_putorius_furo
ENSVPAG00000006130	A1CF	86	88.484	ENSMLUG00000016071	A1CF	87	88.676	Myotis_lucifugus
ENSVPAG00000006130	A1CF	86	88.676	ENSNGAG00000015136	A1cf	87	88.676	Nannospalax_galili
ENSVPAG00000006130	A1CF	86	72.968	ENSNBRG00000001712	a1cf	87	75.236	Neolamprologus_brichardi
ENSVPAG00000006130	A1CF	86	90.019	ENSNLEG00000012028	A1CF	87	90.019	Nomascus_leucogenys
ENSVPAG00000006130	A1CF	86	86.576	ENSMEUG00000015909	A1CF	92	86.576	Notamacropus_eugenii
ENSVPAG00000006130	A1CF	74	78.747	ENSOPRG00000010667	A1CF	82	78.667	Ochotona_princeps
ENSVPAG00000006130	A1CF	86	73.535	ENSONIG00000019105	a1cf	87	74.858	Oreochromis_niloticus
ENSVPAG00000006130	A1CF	64	89.239	ENSOANG00000007360	A1CF	82	89.239	Ornithorhynchus_anatinus
ENSVPAG00000006130	A1CF	86	89.474	ENSOCUG00000011587	A1CF	87	89.474	Oryctolagus_cuniculus
ENSVPAG00000006130	A1CF	86	70.950	ENSORLG00000013342	a1cf	87	70.950	Oryzias_latipes
ENSVPAG00000006130	A1CF	86	71.375	ENSORLG00020000586	a1cf	87	71.375	Oryzias_latipes_hni
ENSVPAG00000006130	A1CF	86	71.190	ENSORLG00015018569	a1cf	87	71.190	Oryzias_latipes_hsok
ENSVPAG00000006130	A1CF	86	73.245	ENSOMEG00000013531	a1cf	87	73.245	Oryzias_melastigma
ENSVPAG00000006130	A1CF	86	87.908	ENSOGAG00000012884	A1CF	87	87.908	Otolemur_garnettii
ENSVPAG00000006130	A1CF	86	89.635	ENSOARG00000013695	A1CF	87	89.635	Ovis_aries
ENSVPAG00000006130	A1CF	99	80.500	ENSPPAG00000028115	A1CF	84	95.673	Pan_paniscus
ENSVPAG00000006130	A1CF	86	88.676	ENSPPRG00000012180	A1CF	87	88.868	Panthera_pardus
ENSVPAG00000006130	A1CF	86	88.676	ENSPTIG00000021223	A1CF	87	88.868	Panthera_tigris_altaica
ENSVPAG00000006130	A1CF	86	90.643	ENSPTRG00000002508	A1CF	89	89.251	Pan_troglodytes
ENSVPAG00000006130	A1CF	86	91.033	ENSPANG00000021988	A1CF	87	91.033	Papio_anubis
ENSVPAG00000006130	A1CF	86	77.040	ENSPKIG00000025176	a1cf	87	77.040	Paramormyrops_kingsleyae
ENSVPAG00000006130	A1CF	86	84.825	ENSPSIG00000010318	A1CF	87	84.825	Pelodiscus_sinensis
ENSVPAG00000006130	A1CF	73	69.932	ENSPMGG00000013359	a1cf	85	65.209	Periophthalmus_magnuspinnatus
ENSVPAG00000006130	A1CF	86	88.100	ENSPEMG00000015021	A1cf	87	88.100	Peromyscus_maniculatus_bairdii
ENSVPAG00000006130	A1CF	86	86.187	ENSPCIG00000002175	A1CF	87	86.187	Phascolarctos_cinereus
ENSVPAG00000006130	A1CF	86	71.747	ENSPFOG00000006683	a1cf	87	73.420	Poecilia_formosa
ENSVPAG00000006130	A1CF	86	71.561	ENSPFOG00000007437	-	87	73.234	Poecilia_formosa
ENSVPAG00000006130	A1CF	86	72.642	ENSPLAG00000000026	a1cf	87	74.340	Poecilia_latipinna
ENSVPAG00000006130	A1CF	86	72.642	ENSPLAG00000001210	-	87	74.340	Poecilia_latipinna
ENSVPAG00000006130	A1CF	86	63.060	ENSPMEG00000015529	-	86	64.739	Poecilia_mexicana
ENSVPAG00000006130	A1CF	86	64.015	ENSPMEG00000000921	a1cf	86	65.720	Poecilia_mexicana
ENSVPAG00000006130	A1CF	86	71.561	ENSPREG00000016298	a1cf	87	73.234	Poecilia_reticulata
ENSVPAG00000006130	A1CF	86	91.423	ENSPPYG00000002819	A1CF	87	91.423	Pongo_abelii
ENSVPAG00000006130	A1CF	69	83.791	ENSPCAG00000006463	A1CF	70	83.791	Procavia_capensis
ENSVPAG00000006130	A1CF	86	88.868	ENSPCOG00000024172	A1CF	87	88.868	Propithecus_coquereli
ENSVPAG00000006130	A1CF	86	71.881	ENSPNYG00000017944	a1cf	87	74.115	Pundamilia_nyererei
ENSVPAG00000006130	A1CF	86	77.649	ENSPNAG00000007704	a1cf	87	77.649	Pygocentrus_nattereri
ENSVPAG00000006130	A1CF	86	88.499	ENSRNOG00000033195	A1cf	87	88.499	Rattus_norvegicus
ENSVPAG00000006130	A1CF	85	89.744	ENSRBIG00000042892	A1CF	100	89.744	Rhinopithecus_bieti
ENSVPAG00000006130	A1CF	86	91.033	ENSRROG00000041398	A1CF	91	91.033	Rhinopithecus_roxellana
ENSVPAG00000006130	A1CF	99	80.565	ENSSBOG00000021930	A1CF	100	91.124	Saimiri_boliviensis_boliviensis
ENSVPAG00000006130	A1CF	86	84.825	ENSSHAG00000005096	A1CF	87	84.825	Sarcophilus_harrisii
ENSVPAG00000006130	A1CF	86	77.992	ENSSFOG00015011774	a1cf	87	77.992	Scleropages_formosus
ENSVPAG00000006130	A1CF	86	71.561	ENSSMAG00000013271	a1cf	87	71.933	Scophthalmus_maximus
ENSVPAG00000006130	A1CF	86	72.538	ENSSDUG00000013930	a1cf	87	73.674	Seriola_dumerili
ENSVPAG00000006130	A1CF	86	66.730	ENSSLDG00000004290	a1cf	86	67.878	Seriola_lalandi_dorsalis
ENSVPAG00000006130	A1CF	86	79.532	ENSSARG00000005940	A1CF	87	79.532	Sorex_araneus
ENSVPAG00000006130	A1CF	86	83.365	ENSSPUG00000006797	A1CF	86	83.365	Sphenodon_punctatus
ENSVPAG00000006130	A1CF	86	90.403	ENSSSCG00000010431	A1CF	87	90.403	Sus_scrofa
ENSVPAG00000006130	A1CF	86	83.716	ENSTGUG00000005090	A1CF	87	83.716	Taeniopygia_guttata
ENSVPAG00000006130	A1CF	86	71.322	ENSTRUG00000001982	a1cf	87	71.322	Takifugu_rubripes
ENSVPAG00000006130	A1CF	86	70.872	ENSTNIG00000003580	a1cf	87	70.872	Tetraodon_nigroviridis
ENSVPAG00000006130	A1CF	99	78.885	ENSTTRG00000013190	A1CF	99	78.885	Tursiops_truncatus
ENSVPAG00000006130	A1CF	86	90.253	ENSUAMG00000020065	A1CF	87	90.448	Ursus_americanus
ENSVPAG00000006130	A1CF	86	88.676	ENSUMAG00000011162	A1CF	90	88.868	Ursus_maritimus
ENSVPAG00000006130	A1CF	86	90.448	ENSVVUG00000002504	A1CF	83	94.843	Vulpes_vulpes
ENSVPAG00000006130	A1CF	86	74.095	ENSXETG00000006611	a1cf	87	74.095	Xenopus_tropicalis
ENSVPAG00000006130	A1CF	86	74.335	ENSXCOG00000003302	a1cf	87	75.475	Xiphophorus_couchianus
ENSVPAG00000006130	A1CF	86	73.221	ENSXMAG00000016703	a1cf	87	74.345	Xiphophorus_maculatus