EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000006300 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 5197 bases
Position: chrGeneScaffold_314:144428-149624
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005844	RRM_5	PF13893.6	3.8e-08	1	1
ENSVPAP00000005844	RRM_1	PF00076.22	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006299	-	801	-	ENSVPAP00000005844	266 (aa)	-	UPI00018BCDAA

Gene Model

Click here to download ENSVPAG00000006300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006300	-	100	90.637	ENSG00000076053	RBM7	99	93.919	Homo_sapiens
ENSVPAG00000006300	-	96	41.877	ENSAPOG00000012768	rbm7	97	40.860	Acanthochromis_polyacanthus
ENSVPAG00000006300	-	100	89.513	ENSAMEG00000013276	-	100	89.513	Ailuropoda_melanoleuca
ENSVPAG00000006300	-	96	42.238	ENSAOCG00000004178	rbm7	97	40.860	Amphiprion_ocellaris
ENSVPAG00000006300	-	96	42.701	ENSAPEG00000021981	rbm7	97	41.304	Amphiprion_percula
ENSVPAG00000006300	-	84	57.328	ENSAPLG00000005180	-	100	57.328	Anas_platyrhynchos
ENSVPAG00000006300	-	100	50.173	ENSACAG00000011589	-	100	50.694	Anolis_carolinensis
ENSVPAG00000006300	-	58	92.308	ENSANAG00000031340	-	100	92.308	Aotus_nancymaae
ENSVPAG00000006300	-	55	94.558	ENSANAG00000031879	-	94	94.558	Aotus_nancymaae
ENSVPAG00000006300	-	55	55.629	ENSACLG00000001203	rbm7	54	51.656	Astatotilapia_calliptera
ENSVPAG00000006300	-	98	48.029	ENSAMXG00000037251	rbm7	99	46.377	Astyanax_mexicanus
ENSVPAG00000006300	-	100	89.513	ENSBTAG00000008219	RBM7	100	89.888	Bos_taurus
ENSVPAG00000006300	-	100	89.139	ENSCJAG00000011949	-	99	92.105	Callithrix_jacchus
ENSVPAG00000006300	-	100	87.266	ENSCAFG00000013514	-	100	88.390	Canis_familiaris
ENSVPAG00000006300	-	100	87.640	ENSCAFG00020002518	-	100	88.764	Canis_lupus_dingo
ENSVPAG00000006300	-	100	89.888	ENSCHIG00000010879	-	100	89.513	Capra_hircus
ENSVPAG00000006300	-	100	89.888	ENSCHIG00000008632	-	100	89.513	Capra_hircus
ENSVPAG00000006300	-	100	88.390	ENSTSYG00000013731	-	100	88.390	Carlito_syrichta
ENSVPAG00000006300	-	88	89.362	ENSCAPG00000012045	-	100	89.362	Cavia_aperea
ENSVPAG00000006300	-	90	87.552	ENSCPOG00000034273	-	100	87.552	Cavia_porcellus
ENSVPAG00000006300	-	100	89.139	ENSCCAG00000036534	-	100	90.262	Cebus_capucinus
ENSVPAG00000006300	-	100	91.386	ENSCATG00000037361	-	100	91.386	Cercocebus_atys
ENSVPAG00000006300	-	100	87.361	ENSCLAG00000014875	-	100	86.989	Chinchilla_lanigera
ENSVPAG00000006300	-	100	91.450	ENSCSAG00000002756	-	100	91.450	Chlorocebus_sabaeus
ENSVPAG00000006300	-	55	92.568	ENSCHOG00000012747	-	100	92.568	Choloepus_hoffmanni
ENSVPAG00000006300	-	100	56.923	ENSCPBG00000009366	-	100	56.923	Chrysemys_picta_bellii
ENSVPAG00000006300	-	100	91.760	ENSCANG00000031398	-	100	91.760	Colobus_angolensis_palliatus
ENSVPAG00000006300	-	100	85.768	ENSCGRG00001019236	Rbm7	100	85.768	Cricetulus_griseus_chok1gshd
ENSVPAG00000006300	-	100	85.393	ENSCGRG00000005045	Rbm7	100	85.393	Cricetulus_griseus_crigri
ENSVPAG00000006300	-	58	49.068	ENSCSEG00000002160	rbm7	62	44.848	Cynoglossus_semilaevis
ENSVPAG00000006300	-	97	39.416	ENSCVAG00000023415	rbm7	93	38.519	Cyprinodon_variegatus
ENSVPAG00000006300	-	98	44.649	ENSDARG00000020841	rbm7	99	43.750	Danio_rerio
ENSVPAG00000006300	-	100	90.637	ENSDNOG00000018423	-	100	90.637	Dasypus_novemcinctus
ENSVPAG00000006300	-	100	86.142	ENSDORG00000029149	Rbm7	100	83.895	Dipodomys_ordii
ENSVPAG00000006300	-	100	79.104	ENSETEG00000015869	-	100	79.104	Echinops_telfairi
ENSVPAG00000006300	-	100	90.637	ENSEASG00005006676	-	100	90.637	Equus_asinus_asinus
ENSVPAG00000006300	-	100	90.637	ENSECAG00000004636	-	100	91.011	Equus_caballus
ENSVPAG00000006300	-	98	77.099	ENSEEUG00000015854	-	98	77.099	Erinaceus_europaeus
ENSVPAG00000006300	-	98	47.566	ENSELUG00000017868	rbm7	99	47.955	Esox_lucius
ENSVPAG00000006300	-	100	88.390	ENSFCAG00000040484	-	100	88.764	Felis_catus
ENSVPAG00000006300	-	97	49.630	ENSFALG00000010039	-	88	49.819	Ficedula_albicollis
ENSVPAG00000006300	-	100	86.142	ENSFDAG00000010616	-	100	86.142	Fukomys_damarensis
ENSVPAG00000006300	-	94	39.313	ENSGMOG00000013362	rbm7	94	38.662	Gadus_morhua
ENSVPAG00000006300	-	56	53.333	ENSGALG00000044391	RBM11	57	53.333	Gallus_gallus
ENSVPAG00000006300	-	100	54.138	ENSGALG00000007017	RBM7	100	52.234	Gallus_gallus
ENSVPAG00000006300	-	95	43.019	ENSGAFG00000000870	rbm7	91	42.146	Gambusia_affinis
ENSVPAG00000006300	-	55	55.705	ENSGACG00000006628	rbm7	98	38.790	Gasterosteus_aculeatus
ENSVPAG00000006300	-	100	60.797	ENSGAGG00000021127	-	100	60.797	Gopherus_agassizii
ENSVPAG00000006300	-	55	89.865	ENSGGOG00000009941	-	94	70.866	Gorilla_gorilla
ENSVPAG00000006300	-	55	54.305	ENSHBUG00000004319	rbm7	54	50.980	Haplochromis_burtoni
ENSVPAG00000006300	-	96	83.594	ENSHGLG00000016655	-	98	83.203	Heterocephalus_glaber_female
ENSVPAG00000006300	-	99	81.509	ENSHGLG00000014428	-	98	81.509	Heterocephalus_glaber_female
ENSVPAG00000006300	-	56	72.000	ENSHGLG00000013918	-	100	70.000	Heterocephalus_glaber_female
ENSVPAG00000006300	-	100	91.011	ENSHGLG00000018700	RBM7	100	91.386	Heterocephalus_glaber_female
ENSVPAG00000006300	-	100	78.439	ENSHGLG00000002486	-	95	78.810	Heterocephalus_glaber_female
ENSVPAG00000006300	-	96	83.594	ENSHGLG00100009317	-	98	83.203	Heterocephalus_glaber_male
ENSVPAG00000006300	-	100	90.637	ENSHGLG00100005358	-	100	91.011	Heterocephalus_glaber_male
ENSVPAG00000006300	-	100	78.439	ENSHGLG00100011792	-	95	78.810	Heterocephalus_glaber_male
ENSVPAG00000006300	-	56	72.000	ENSHGLG00100015249	-	100	70.000	Heterocephalus_glaber_male
ENSVPAG00000006300	-	100	61.049	ENSHGLG00100005739	-	94	61.798	Heterocephalus_glaber_male
ENSVPAG00000006300	-	99	81.509	ENSHGLG00100011703	-	98	81.509	Heterocephalus_glaber_male
ENSVPAG00000006300	-	98	47.970	ENSIPUG00000009397	rbm7	99	47.212	Ictalurus_punctatus
ENSVPAG00000006300	-	96	73.152	ENSSTOG00000031973	-	100	72.763	Ictidomys_tridecemlineatus
ENSVPAG00000006300	-	100	85.393	ENSSTOG00000012459	-	100	85.768	Ictidomys_tridecemlineatus
ENSVPAG00000006300	-	99	78.947	ENSJJAG00000016540	-	100	78.947	Jaculus_jaculus
ENSVPAG00000006300	-	100	88.390	ENSJJAG00000011823	-	100	88.390	Jaculus_jaculus
ENSVPAG00000006300	-	96	40.299	ENSLBEG00000024902	rbm7	97	38.202	Labrus_bergylta
ENSVPAG00000006300	-	98	58.955	ENSLACG00000018620	-	99	58.955	Latimeria_chalumnae
ENSVPAG00000006300	-	99	45.390	ENSLOCG00000002408	rbm7	99	47.482	Lepisosteus_oculatus
ENSVPAG00000006300	-	100	82.836	ENSLAFG00000012444	-	100	82.836	Loxodonta_africana
ENSVPAG00000006300	-	100	92.135	ENSMFAG00000000965	-	100	92.135	Macaca_fascicularis
ENSVPAG00000006300	-	100	91.386	ENSMMUG00000012270	RBM7	100	91.760	Macaca_mulatta
ENSVPAG00000006300	-	100	91.760	ENSMNEG00000005397	-	100	91.760	Macaca_nemestrina
ENSVPAG00000006300	-	100	91.386	ENSMLEG00000041953	-	100	91.386	Mandrillus_leucophaeus
ENSVPAG00000006300	-	98	44.326	ENSMAMG00000014145	rbm7	99	42.553	Mastacembelus_armatus
ENSVPAG00000006300	-	55	54.967	ENSMZEG00005013295	rbm7	54	51.634	Maylandia_zebra
ENSVPAG00000006300	-	100	55.556	ENSMGAG00000003004	-	100	54.167	Meleagris_gallopavo
ENSVPAG00000006300	-	54	86.897	ENSMAUG00000017938	-	93	86.897	Mesocricetus_auratus
ENSVPAG00000006300	-	100	84.270	ENSMAUG00000001942	-	100	84.270	Mesocricetus_auratus
ENSVPAG00000006300	-	100	90.146	ENSMICG00000042981	-	100	90.511	Microcebus_murinus
ENSVPAG00000006300	-	100	84.270	ENSMOCG00000009674	Rbm7	100	84.270	Microtus_ochrogaster
ENSVPAG00000006300	-	91	36.015	ENSMMOG00000004967	rbm7	68	60.563	Mola_mola
ENSVPAG00000006300	-	100	76.173	ENSMODG00000013918	-	100	75.451	Monodelphis_domestica
ENSVPAG00000006300	-	88	40.496	ENSMALG00000010901	rbm7	53	48.649	Monopterus_albus
ENSVPAG00000006300	-	100	83.955	MGP_CAROLIEiJ_G0032167	Rbm7	100	83.955	Mus_caroli
ENSVPAG00000006300	-	100	84.644	ENSMUSG00000042396	Rbm7	100	84.644	Mus_musculus
ENSVPAG00000006300	-	100	84.270	MGP_PahariEiJ_G0015035	Rbm7	100	84.270	Mus_pahari
ENSVPAG00000006300	-	100	82.397	MGP_SPRETEiJ_G0033306	Rbm7	100	82.397	Mus_spretus
ENSVPAG00000006300	-	100	88.015	ENSMPUG00000003941	-	100	88.764	Mustela_putorius_furo
ENSVPAG00000006300	-	98	84.791	ENSMLUG00000023234	-	99	84.791	Myotis_lucifugus
ENSVPAG00000006300	-	100	85.768	ENSNGAG00000006244	-	100	85.768	Nannospalax_galili
ENSVPAG00000006300	-	55	54.305	ENSNBRG00000017104	rbm7	54	50.980	Neolamprologus_brichardi
ENSVPAG00000006300	-	100	91.760	ENSNLEG00000029494	-	100	91.760	Nomascus_leucogenys
ENSVPAG00000006300	-	100	66.543	ENSMEUG00000006187	-	100	66.543	Notamacropus_eugenii
ENSVPAG00000006300	-	100	82.772	ENSOPRG00000011060	-	100	82.772	Ochotona_princeps
ENSVPAG00000006300	-	55	92.517	ENSODEG00000010164	-	99	92.517	Octodon_degus
ENSVPAG00000006300	-	100	67.790	ENSODEG00000016844	-	100	67.790	Octodon_degus
ENSVPAG00000006300	-	98	66.284	ENSODEG00000000186	-	96	65.900	Octodon_degus
ENSVPAG00000006300	-	55	54.248	ENSONIG00000005369	rbm7	55	51.282	Oreochromis_niloticus
ENSVPAG00000006300	-	100	72.263	ENSOANG00000001755	-	93	72.263	Ornithorhynchus_anatinus
ENSVPAG00000006300	-	100	91.011	ENSOCUG00000003342	-	100	91.011	Oryctolagus_cuniculus
ENSVPAG00000006300	-	56	56.579	ENSORLG00000028880	rbm7	56	53.896	Oryzias_latipes
ENSVPAG00000006300	-	56	55.921	ENSORLG00020010841	rbm7	55	50.314	Oryzias_latipes_hni
ENSVPAG00000006300	-	56	55.921	ENSORLG00015000536	rbm7	56	52.632	Oryzias_latipes_hsok
ENSVPAG00000006300	-	100	91.760	ENSOGAG00000016857	-	100	91.760	Otolemur_garnettii
ENSVPAG00000006300	-	100	89.888	ENSOARG00000000924	-	99	89.513	Ovis_aries
ENSVPAG00000006300	-	100	91.011	ENSPPAG00000027572	-	100	91.011	Pan_paniscus
ENSVPAG00000006300	-	100	89.888	ENSPPRG00000004372	-	100	90.262	Panthera_pardus
ENSVPAG00000006300	-	100	89.888	ENSPTIG00000013512	-	100	90.262	Panthera_tigris_altaica
ENSVPAG00000006300	-	100	91.011	ENSPTRG00000004305	RBM7	100	91.011	Pan_troglodytes
ENSVPAG00000006300	-	96	84.375	ENSPTRG00000049329	-	98	84.766	Pan_troglodytes
ENSVPAG00000006300	-	100	91.011	ENSPANG00000009431	-	100	91.011	Papio_anubis
ENSVPAG00000006300	-	98	50.562	ENSPKIG00000016648	rbm7	99	49.811	Paramormyrops_kingsleyae
ENSVPAG00000006300	-	55	51.678	ENSPMGG00000001523	rbm7	90	67.500	Periophthalmus_magnuspinnatus
ENSVPAG00000006300	-	94	81.349	ENSPEMG00000011553	-	99	81.349	Peromyscus_maniculatus_bairdii
ENSVPAG00000006300	-	97	77.239	ENSPCIG00000011225	-	84	77.536	Phascolarctos_cinereus
ENSVPAG00000006300	-	97	40.727	ENSPFOG00000002193	rbm7	94	39.852	Poecilia_formosa
ENSVPAG00000006300	-	97	40.364	ENSPLAG00000010517	rbm7	94	39.483	Poecilia_latipinna
ENSVPAG00000006300	-	97	40.876	ENSPMEG00000003603	rbm7	94	40.000	Poecilia_mexicana
ENSVPAG00000006300	-	95	42.910	ENSPREG00000015610	rbm7	91	42.045	Poecilia_reticulata
ENSVPAG00000006300	-	100	90.262	ENSPPYG00000003894	-	100	90.262	Pongo_abelii
ENSVPAG00000006300	-	88	70.886	ENSPCAG00000003270	-	100	70.042	Procavia_capensis
ENSVPAG00000006300	-	100	91.386	ENSPVAG00000005294	-	100	91.386	Pteropus_vampyrus
ENSVPAG00000006300	-	55	54.305	ENSPNYG00000012084	rbm7	54	50.980	Pundamilia_nyererei
ENSVPAG00000006300	-	98	44.097	ENSPNAG00000012813	rbm7	99	45.387	Pygocentrus_nattereri
ENSVPAG00000006300	-	100	92.135	ENSRBIG00000044762	-	100	92.135	Rhinopithecus_bieti
ENSVPAG00000006300	-	100	92.135	ENSRROG00000032280	-	100	92.135	Rhinopithecus_roxellana
ENSVPAG00000006300	-	100	88.015	ENSSBOG00000027830	-	100	88.764	Saimiri_boliviensis_boliviensis
ENSVPAG00000006300	-	100	77.899	ENSSHAG00000008426	-	100	77.899	Sarcophilus_harrisii
ENSVPAG00000006300	-	98	48.188	ENSSFOG00015008458	rbm7	99	48.689	Scleropages_formosus
ENSVPAG00000006300	-	96	41.241	ENSSMAG00000003040	rbm7	97	38.235	Scophthalmus_maximus
ENSVPAG00000006300	-	96	41.818	ENSSDUG00000005361	rbm7	97	40.433	Seriola_dumerili
ENSVPAG00000006300	-	96	41.818	ENSSLDG00000003221	rbm7	97	40.433	Seriola_lalandi_dorsalis
ENSVPAG00000006300	-	88	54.745	ENSSPUG00000006032	-	99	56.934	Sphenodon_punctatus
ENSVPAG00000006300	-	56	54.305	ENSSPAG00000019320	rbm7	68	72.093	Stegastes_partitus
ENSVPAG00000006300	-	100	91.386	ENSSSCG00000027905	-	100	91.760	Sus_scrofa
ENSVPAG00000006300	-	100	48.432	ENSTGUG00000000117	-	100	49.129	Taeniopygia_guttata
ENSVPAG00000006300	-	53	49.333	ENSTRUG00000020355	rbm7	53	47.945	Takifugu_rubripes
ENSVPAG00000006300	-	100	79.026	ENSTBEG00000008650	-	100	79.026	Tupaia_belangeri
ENSVPAG00000006300	-	100	91.011	ENSTTRG00000001515	-	100	91.011	Tursiops_truncatus
ENSVPAG00000006300	-	100	89.513	ENSUAMG00000019095	-	100	89.888	Ursus_americanus
ENSVPAG00000006300	-	100	89.513	ENSUMAG00000003774	-	100	89.888	Ursus_maritimus
ENSVPAG00000006300	-	95	53.992	ENSXETG00000012654	rbm7	99	54.545	Xenopus_tropicalis
ENSVPAG00000006300	-	95	42.105	ENSXMAG00000000970	rbm7	91	40.226	Xiphophorus_maculatus