EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000006337 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 15280 bases
Position: chrGeneScaffold_2231:1341406-1356685
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005880	RRM_5	PF13893.6	8.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006337	-	2700	-	ENSVPAP00000005880	899 (aa)	-	UPI00018BE8F2

Gene Model

Click here to download ENSVPAG00000006337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006337	-	100	92.881	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSVPAG00000006337	-	99	98.886	ENSAMEG00000011347	-	100	98.886	Ailuropoda_melanoleuca
ENSVPAG00000006337	-	100	81.808	ENSAPLG00000008118	-	100	81.264	Anas_platyrhynchos
ENSVPAG00000006337	-	99	72.277	ENSACAG00000016233	-	99	72.277	Anolis_carolinensis
ENSVPAG00000006337	-	71	72.671	ENSANAG00000024654	-	99	72.671	Aotus_nancymaae
ENSVPAG00000006337	-	99	97.745	ENSANAG00000022951	-	99	97.749	Aotus_nancymaae
ENSVPAG00000006337	-	70	38.095	ENSAMXG00000010685	matr3l1.1	79	38.971	Astyanax_mexicanus
ENSVPAG00000006337	-	68	58.929	ENSAMXG00000010681	matr3l1.1	85	58.929	Astyanax_mexicanus
ENSVPAG00000006337	-	94	98.460	ENSBTAG00000006756	MATR3	99	98.460	Bos_taurus
ENSVPAG00000006337	-	100	97.775	ENSCJAG00000006888	-	100	97.775	Callithrix_jacchus
ENSVPAG00000006337	-	100	94.883	ENSCAFG00000001345	MATR3	100	94.883	Canis_familiaris
ENSVPAG00000006337	-	99	98.196	ENSCAFG00020010504	-	99	98.223	Canis_lupus_dingo
ENSVPAG00000006337	-	100	93.548	ENSCHIG00000025746	-	100	93.548	Capra_hircus
ENSVPAG00000006337	-	100	92.547	ENSTSYG00000011028	-	100	92.547	Carlito_syrichta
ENSVPAG00000006337	-	100	92.547	ENSCPOG00000014076	-	100	92.547	Cavia_porcellus
ENSVPAG00000006337	-	56	47.692	ENSCCAG00000028170	ZNF638	74	32.597	Cebus_capucinus
ENSVPAG00000006337	-	100	92.992	ENSCCAG00000025074	-	99	98.104	Cebus_capucinus
ENSVPAG00000006337	-	53	56.000	ENSCATG00000032207	ZNF638	74	32.222	Cercocebus_atys
ENSVPAG00000006337	-	67	89.018	ENSCATG00000041304	-	98	89.018	Cercocebus_atys
ENSVPAG00000006337	-	100	92.770	ENSCLAG00000015998	-	100	92.770	Chinchilla_lanigera
ENSVPAG00000006337	-	100	93.103	ENSCSAG00000013075	-	100	93.103	Chlorocebus_sabaeus
ENSVPAG00000006337	-	100	80.656	ENSCPBG00000006303	-	100	81.311	Chrysemys_picta_bellii
ENSVPAG00000006337	-	100	98.331	ENSCANG00000028224	-	100	98.331	Colobus_angolensis_palliatus
ENSVPAG00000006337	-	100	92.325	ENSCGRG00001020227	Matr3	100	92.325	Cricetulus_griseus_chok1gshd
ENSVPAG00000006337	-	100	92.214	ENSCGRG00000011298	Matr3	100	92.214	Cricetulus_griseus_crigri
ENSVPAG00000006337	-	70	47.059	ENSCSEG00000012682	matr3l1.1	88	47.059	Cynoglossus_semilaevis
ENSVPAG00000006337	-	67	39.806	ENSCVAG00000005337	matr3l1.1	93	35.223	Cyprinodon_variegatus
ENSVPAG00000006337	-	100	98.335	ENSDNOG00000037723	-	100	98.335	Dasypus_novemcinctus
ENSVPAG00000006337	-	100	93.660	ENSEASG00005020857	-	100	93.660	Equus_asinus_asinus
ENSVPAG00000006337	-	100	93.548	ENSECAG00000012882	MATR3	100	93.548	Equus_caballus
ENSVPAG00000006337	-	82	43.689	ENSELUG00000021651	si:ch211-271b14.1	95	43.689	Esox_lucius
ENSVPAG00000006337	-	71	36.471	ENSELUG00000021848	matr3l1.1	78	37.607	Esox_lucius
ENSVPAG00000006337	-	100	93.548	ENSFCAG00000021911	-	100	93.548	Felis_catus
ENSVPAG00000006337	-	100	79.781	ENSFALG00000003071	-	100	80.044	Ficedula_albicollis
ENSVPAG00000006337	-	100	92.102	ENSFDAG00000017675	-	100	92.102	Fukomys_damarensis
ENSVPAG00000006337	-	100	81.421	ENSGALG00000002478	MATR3	100	80.874	Gallus_gallus
ENSVPAG00000006337	-	100	80.480	ENSGAGG00000011386	-	100	81.134	Gopherus_agassizii
ENSVPAG00000006337	-	100	98.220	ENSGGOG00000007308	-	100	98.220	Gorilla_gorilla
ENSVPAG00000006337	-	100	93.215	ENSHGLG00000004673	MATR3	100	93.215	Heterocephalus_glaber_female
ENSVPAG00000006337	-	62	82.918	ENSHGLG00100006442	-	100	89.127	Heterocephalus_glaber_male
ENSVPAG00000006337	-	58	49.057	ENSHCOG00000013223	matr3l1.1	74	50.000	Hippocampus_comes
ENSVPAG00000006337	-	100	93.660	ENSSTOG00000014746	-	100	93.660	Ictidomys_tridecemlineatus
ENSVPAG00000006337	-	100	89.433	ENSJJAG00000021710	-	100	91.769	Jaculus_jaculus
ENSVPAG00000006337	-	55	77.419	ENSJJAG00000011022	-	100	77.225	Jaculus_jaculus
ENSVPAG00000006337	-	99	57.680	ENSLACG00000006743	-	99	58.432	Latimeria_chalumnae
ENSVPAG00000006337	-	100	98.443	ENSMFAG00000000634	-	100	98.443	Macaca_fascicularis
ENSVPAG00000006337	-	56	97.024	ENSMMUG00000015963	-	99	97.024	Macaca_mulatta
ENSVPAG00000006337	-	100	98.443	ENSMMUG00000016741	MATR3	100	98.443	Macaca_mulatta
ENSVPAG00000006337	-	100	97.108	ENSMNEG00000042856	-	100	97.108	Macaca_nemestrina
ENSVPAG00000006337	-	100	97.108	ENSMLEG00000041178	-	100	97.108	Mandrillus_leucophaeus
ENSVPAG00000006337	-	70	49.412	ENSMAMG00000013840	matr3l1.1	74	42.735	Mastacembelus_armatus
ENSVPAG00000006337	-	100	81.311	ENSMGAG00000001331	-	100	80.765	Meleagris_gallopavo
ENSVPAG00000006337	-	100	92.325	ENSMAUG00000011647	Matr3	100	92.325	Mesocricetus_auratus
ENSVPAG00000006337	-	66	83.752	ENSMICG00000012438	-	99	87.726	Microcebus_murinus
ENSVPAG00000006337	-	100	92.325	ENSMOCG00000015711	Matr3	100	92.325	Microtus_ochrogaster
ENSVPAG00000006337	-	100	84.828	ENSMODG00000011925	-	99	85.493	Monodelphis_domestica
ENSVPAG00000006337	-	100	92.325	MGP_CAROLIEiJ_G0022108	Matr3	100	92.325	Mus_caroli
ENSVPAG00000006337	-	100	92.325	ENSMUSG00000037236	Matr3	100	92.325	Mus_musculus
ENSVPAG00000006337	-	100	92.325	MGP_PahariEiJ_G0018842	Matr3	100	92.325	Mus_pahari
ENSVPAG00000006337	-	100	91.991	MGP_SPRETEiJ_G0023020	Matr3	100	91.991	Mus_spretus
ENSVPAG00000006337	-	100	95.328	ENSMPUG00000009297	-	100	95.328	Mustela_putorius_furo
ENSVPAG00000006337	-	100	92.231	ENSMLUG00000005798	-	99	92.231	Myotis_lucifugus
ENSVPAG00000006337	-	100	92.436	ENSNGAG00000017452	Matr3	100	92.436	Nannospalax_galili
ENSVPAG00000006337	-	50	56.000	ENSNLEG00000010274	ZNF638	74	32.044	Nomascus_leucogenys
ENSVPAG00000006337	-	100	93.215	ENSNLEG00000009093	-	99	98.341	Nomascus_leucogenys
ENSVPAG00000006337	-	99	93.049	ENSOPRG00000016511	-	100	93.049	Ochotona_princeps
ENSVPAG00000006337	-	100	92.659	ENSODEG00000003015	-	100	92.659	Octodon_degus
ENSVPAG00000006337	-	100	93.103	ENSOCUG00000026311	MATR3	100	93.103	Oryctolagus_cuniculus
ENSVPAG00000006337	-	66	37.589	ENSORLG00020009362	matr3l1.1	79	38.298	Oryzias_latipes_hni
ENSVPAG00000006337	-	61	47.059	ENSORLG00015018551	matr3l1.1	79	38.462	Oryzias_latipes_hsok
ENSVPAG00000006337	-	63	41.228	ENSOMEG00000022287	matr3l1.1	81	35.057	Oryzias_melastigma
ENSVPAG00000006337	-	100	93.437	ENSOGAG00000010607	-	100	93.437	Otolemur_garnettii
ENSVPAG00000006337	-	100	93.548	ENSOARG00000016931	-	99	93.548	Ovis_aries
ENSVPAG00000006337	-	100	98.220	ENSPPAG00000001418	-	100	98.220	Pan_paniscus
ENSVPAG00000006337	-	67	84.808	ENSPPAG00000026720	-	99	84.808	Pan_paniscus
ENSVPAG00000006337	-	100	93.660	ENSPPRG00000008004	-	100	93.660	Panthera_pardus
ENSVPAG00000006337	-	96	93.387	ENSPTIG00000010711	-	100	93.387	Panthera_tigris_altaica
ENSVPAG00000006337	-	100	98.220	ENSPTRG00000017294	MATR3	100	98.220	Pan_troglodytes
ENSVPAG00000006337	-	67	89.667	ENSPANG00000032489	-	99	89.667	Papio_anubis
ENSVPAG00000006337	-	100	98.443	ENSPANG00000012018	-	100	98.443	Papio_anubis
ENSVPAG00000006337	-	93	41.379	ENSPKIG00000000333	matr3l1.1	83	41.379	Paramormyrops_kingsleyae
ENSVPAG00000006337	-	100	81.004	ENSPSIG00000014598	-	100	81.659	Pelodiscus_sinensis
ENSVPAG00000006337	-	100	92.102	ENSPEMG00000020679	Matr3	100	92.102	Peromyscus_maniculatus_bairdii
ENSVPAG00000006337	-	100	98.443	ENSPPYG00000015835	-	100	98.443	Pongo_abelii
ENSVPAG00000006337	-	100	92.770	ENSPCOG00000025718	-	100	92.770	Propithecus_coquereli
ENSVPAG00000006337	-	98	98.301	ENSPVAG00000015431	-	100	98.301	Pteropus_vampyrus
ENSVPAG00000006337	-	100	91.880	ENSRNOG00000019875	Matr3	100	91.880	Rattus_norvegicus
ENSVPAG00000006337	-	67	89.185	ENSRBIG00000034713	-	98	89.185	Rhinopithecus_bieti
ENSVPAG00000006337	-	100	91.657	ENSRROG00000043949	-	100	91.657	Rhinopithecus_roxellana
ENSVPAG00000006337	-	50	56.000	ENSRROG00000045431	ZNF638	74	32.778	Rhinopithecus_roxellana
ENSVPAG00000006337	-	100	97.553	ENSRROG00000039415	-	100	97.553	Rhinopithecus_roxellana
ENSVPAG00000006337	-	56	47.692	ENSSBOG00000029960	ZNF638	74	32.597	Saimiri_boliviensis_boliviensis
ENSVPAG00000006337	-	99	96.843	ENSSBOG00000030159	-	98	96.843	Saimiri_boliviensis_boliviensis
ENSVPAG00000006337	-	100	84.939	ENSSHAG00000010331	-	99	85.730	Sarcophilus_harrisii
ENSVPAG00000006337	-	61	45.882	ENSSDUG00000015369	matr3l1.1	75	43.878	Seriola_dumerili
ENSVPAG00000006337	-	100	79.521	ENSSPUG00000019236	-	100	80.240	Sphenodon_punctatus
ENSVPAG00000006337	-	100	95.328	ENSSSCG00000014343	-	100	95.328	Sus_scrofa
ENSVPAG00000006337	-	100	80.283	ENSTGUG00000014568	MATR3	100	80.392	Taeniopygia_guttata
ENSVPAG00000006337	-	76	57.143	ENSTNIG00000003166	matr3l1.1	85	57.143	Tetraodon_nigroviridis
ENSVPAG00000006337	-	80	98.750	ENSUAMG00000000097	-	97	98.750	Ursus_americanus
ENSVPAG00000006337	-	100	94.772	ENSUMAG00000015808	-	100	94.772	Ursus_maritimus
ENSVPAG00000006337	-	100	93.437	ENSVVUG00000020287	-	100	93.437	Vulpes_vulpes
ENSVPAG00000006337	-	100	55.448	ENSXETG00000003838	matr3	100	54.908	Xenopus_tropicalis
ENSVPAG00000006337	-	64	35.354	ENSXMAG00000014107	-	78	35.354	Xiphophorus_maculatus