EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000006411 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 27719 bases
Position: chrGeneScaffold_3035:171973-199691
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000005949	RRM_1	PF00076.22	1.4e-31	1	2
ENSVPAP00000005949	RRM_1	PF00076.22	1.4e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006411	-	1911	-	ENSVPAP00000005949	636 (aa)	-	UPI00018BD4B5

Gene Model

Click here to download ENSVPAG00000006411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000006411	-	78	86.538	ENSVPAG00000001061	SYNCRIP	77	86.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006411	-	76	94.231	ENSCHIG00000025862	-	71	94.231	Capra_hircus
ENSVPAG00000006411	-	64	52.334	FBgn0038826	Syp	77	51.691	Drosophila_melanogaster
ENSVPAG00000006411	-	76	88.462	ENSGMOG00000002822	-	76	88.462	Gadus_morhua
ENSVPAG00000006411	-	62	92.308	ENSGGOG00000036671	-	74	92.308	Gorilla_gorilla
ENSVPAG00000006411	-	72	90.000	ENSMAMG00000004406	-	75	90.000	Mastacembelus_armatus
ENSVPAG00000006411	-	64	94.231	ENSODEG00000005445	-	72	94.231	Octodon_degus
ENSVPAG00000006411	-	70	91.429	ENSODEG00000004900	-	71	91.429	Octodon_degus
ENSVPAG00000006411	-	61	94.231	ENSPTRG00000043439	-	75	94.231	Pan_troglodytes
ENSVPAG00000006411	-	81	100.000	ENSPCOG00000014665	-	77	100.000	Propithecus_coquereli
ENSVPAG00000006411	-	50	84.615	ENSTGUG00000012478	-	61	84.615	Taeniopygia_guttata
ENSVPAG00000006411	-	77	100.000	ENSTBEG00000002251	-	77	100.000	Tupaia_belangeri
ENSVPAG00000006411	-	81	100.000	ENSTTRG00000007752	-	81	100.000	Tursiops_truncatus
ENSVPAG00000006411	-	63	86.538	ENSTTRG00000004471	-	62	86.538	Tursiops_truncatus