EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000006642 (Gene tree)
Gene ID: -
Gene Symbol: YRDC
Alias: FLJ23476|IRIP|SUA5
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 13709 bases
Position: chrGeneScaffold_1004:50408-64116
Accession: 28905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000006170	Sua5_yciO_yrdC	PF01300.18	1.7e-31	1	2
ENSVPAP00000006170	Sua5_yciO_yrdC	PF01300.18	1.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006643	YRDC-201	699	-	ENSVPAP00000006170	233 (aa)	-	UPI00018BCB63

Gene Model

Click here to download ENSVPAG00000006642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006642's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006642	YRDC	97	74.449	ENSG00000196449	YRDC	84	75.319	Homo_sapiens
ENSVPAG00000006642	YRDC	87	50.490	ENSAPOG00000024293	yrdc	77	50.490	Acanthochromis_polyacanthus
ENSVPAG00000006642	YRDC	78	71.739	ENSAMEG00000001173	YRDC	98	71.739	Ailuropoda_melanoleuca
ENSVPAG00000006642	YRDC	90	49.289	ENSACIG00000017330	yrdc	78	49.289	Amphilophus_citrinellus
ENSVPAG00000006642	YRDC	90	49.065	ENSAOCG00000021647	yrdc	80	49.065	Amphiprion_ocellaris
ENSVPAG00000006642	YRDC	90	49.065	ENSAPEG00000006164	yrdc	80	49.065	Amphiprion_percula
ENSVPAG00000006642	YRDC	87	52.451	ENSATEG00000010086	yrdc	75	52.451	Anabas_testudineus
ENSVPAG00000006642	YRDC	82	49.485	ENSACAG00000017203	YRDC	99	48.095	Anolis_carolinensis
ENSVPAG00000006642	YRDC	96	68.142	ENSANAG00000028788	-	95	68.142	Aotus_nancymaae
ENSVPAG00000006642	YRDC	100	69.620	ENSANAG00000031052	-	86	69.620	Aotus_nancymaae
ENSVPAG00000006642	YRDC	97	45.614	ENSACLG00000027775	yrdc	84	45.614	Astatotilapia_calliptera
ENSVPAG00000006642	YRDC	97	48.899	ENSAMXG00000037791	yrdc	85	48.571	Astyanax_mexicanus
ENSVPAG00000006642	YRDC	100	75.641	ENSBTAG00000006510	YRDC	84	75.641	Bos_taurus
ENSVPAG00000006642	YRDC	97	31.878	WBGene00012997	Y48C3A.18	97	31.878	Caenorhabditis_elegans
ENSVPAG00000006642	YRDC	100	74.468	ENSCJAG00000002078	YRDC	65	74.468	Callithrix_jacchus
ENSVPAG00000006642	YRDC	97	71.491	ENSCAFG00000003253	YRDC	83	71.491	Canis_familiaris
ENSVPAG00000006642	YRDC	97	73.246	ENSCAFG00020007843	YRDC	83	73.246	Canis_lupus_dingo
ENSVPAG00000006642	YRDC	100	75.214	ENSCHIG00000007882	YRDC	85	75.214	Capra_hircus
ENSVPAG00000006642	YRDC	73	70.175	ENSTSYG00000005555	YRDC	61	70.175	Carlito_syrichta
ENSVPAG00000006642	YRDC	100	73.504	ENSCPOG00000036144	YRDC	84	73.504	Cavia_porcellus
ENSVPAG00000006642	YRDC	100	74.468	ENSCCAG00000028891	YRDC	84	74.468	Cebus_capucinus
ENSVPAG00000006642	YRDC	97	73.568	ENSCATG00000036928	YRDC	84	74.468	Cercocebus_atys
ENSVPAG00000006642	YRDC	97	73.009	ENSCLAG00000015012	YRDC	84	73.932	Chinchilla_lanigera
ENSVPAG00000006642	YRDC	97	73.568	ENSCSAG00000001116	YRDC	84	74.468	Chlorocebus_sabaeus
ENSVPAG00000006642	YRDC	73	70.175	ENSCHOG00000005500	YRDC	82	70.175	Choloepus_hoffmanni
ENSVPAG00000006642	YRDC	88	50.962	ENSCPBG00000018446	YRDC	89	50.962	Chrysemys_picta_bellii
ENSVPAG00000006642	YRDC	87	38.498	ENSCING00000007564	-	98	38.498	Ciona_intestinalis
ENSVPAG00000006642	YRDC	87	36.842	ENSCSAVG00000009982	-	98	36.842	Ciona_savignyi
ENSVPAG00000006642	YRDC	97	74.009	ENSCANG00000031111	YRDC	84	74.894	Colobus_angolensis_palliatus
ENSVPAG00000006642	YRDC	97	66.520	ENSCGRG00001000829	-	65	66.809	Cricetulus_griseus_chok1gshd
ENSVPAG00000006642	YRDC	97	72.687	ENSCGRG00001014496	-	84	73.191	Cricetulus_griseus_chok1gshd
ENSVPAG00000006642	YRDC	89	48.325	ENSCSEG00000019075	yrdc	75	48.325	Cynoglossus_semilaevis
ENSVPAG00000006642	YRDC	97	44.156	ENSCVAG00000017355	yrdc	86	44.156	Cyprinodon_variegatus
ENSVPAG00000006642	YRDC	97	48.246	ENSDARG00000041428	yrdc	95	48.246	Danio_rerio
ENSVPAG00000006642	YRDC	97	74.009	ENSDNOG00000038789	-	85	74.312	Dasypus_novemcinctus
ENSVPAG00000006642	YRDC	82	49.223	ENSDNOG00000036198	-	93	49.223	Dasypus_novemcinctus
ENSVPAG00000006642	YRDC	81	71.579	ENSDORG00000008788	Yrdc	84	71.579	Dipodomys_ordii
ENSVPAG00000006642	YRDC	86	38.537	FBgn0061361	CG33786	82	38.537	Drosophila_melanogaster
ENSVPAG00000006642	YRDC	99	90.129	ENSETEG00000003442	YRDC	83	90.129	Echinops_telfairi
ENSVPAG00000006642	YRDC	97	42.731	ENSEBUG00000014080	yrdc	94	42.731	Eptatretus_burgeri
ENSVPAG00000006642	YRDC	97	75.330	ENSEASG00005012253	YRDC	84	76.170	Equus_asinus_asinus
ENSVPAG00000006642	YRDC	97	75.771	ENSECAG00000022522	YRDC	84	76.596	Equus_caballus
ENSVPAG00000006642	YRDC	87	50.980	ENSELUG00000018071	yrdc	66	50.980	Esox_lucius
ENSVPAG00000006642	YRDC	97	74.449	ENSFCAG00000011018	YRDC	84	75.319	Felis_catus
ENSVPAG00000006642	YRDC	81	54.211	ENSFALG00000000964	YRDC	89	53.608	Ficedula_albicollis
ENSVPAG00000006642	YRDC	97	44.589	ENSFHEG00000001029	yrdc	86	44.495	Fundulus_heteroclitus
ENSVPAG00000006642	YRDC	87	50.000	ENSGMOG00000015635	yrdc	97	50.000	Gadus_morhua
ENSVPAG00000006642	YRDC	96	54.425	ENSGALG00000029001	YRDC	87	54.425	Gallus_gallus
ENSVPAG00000006642	YRDC	97	44.156	ENSGAFG00000008396	yrdc	85	44.156	Gambusia_affinis
ENSVPAG00000006642	YRDC	97	46.121	ENSGACG00000013878	yrdc	95	46.121	Gasterosteus_aculeatus
ENSVPAG00000006642	YRDC	95	51.786	ENSGAGG00000014968	YRDC	97	51.786	Gopherus_agassizii
ENSVPAG00000006642	YRDC	97	74.449	ENSGGOG00000007619	YRDC	84	75.319	Gorilla_gorilla
ENSVPAG00000006642	YRDC	97	46.053	ENSHBUG00000009298	yrdc	84	46.053	Haplochromis_burtoni
ENSVPAG00000006642	YRDC	100	74.359	ENSHGLG00000014075	YRDC	84	74.359	Heterocephalus_glaber_female
ENSVPAG00000006642	YRDC	87	72.906	ENSHGLG00100002734	YRDC	74	72.906	Heterocephalus_glaber_male
ENSVPAG00000006642	YRDC	96	45.575	ENSHCOG00000006598	yrdc	88	45.575	Hippocampus_comes
ENSVPAG00000006642	YRDC	96	47.345	ENSIPUG00000014985	yrdc	92	47.345	Ictalurus_punctatus
ENSVPAG00000006642	YRDC	100	74.043	ENSSTOG00000001643	YRDC	84	74.043	Ictidomys_tridecemlineatus
ENSVPAG00000006642	YRDC	97	46.725	ENSKMAG00000013468	yrdc	84	46.725	Kryptolebias_marmoratus
ENSVPAG00000006642	YRDC	97	46.725	ENSLBEG00000027501	yrdc	84	46.725	Labrus_bergylta
ENSVPAG00000006642	YRDC	97	49.160	ENSLACG00000010689	YRDC	96	52.153	Latimeria_chalumnae
ENSVPAG00000006642	YRDC	94	48.182	ENSLOCG00000003321	yrdc	91	48.182	Lepisosteus_oculatus
ENSVPAG00000006642	YRDC	99	73.932	ENSLAFG00000017556	YRDC	84	73.932	Loxodonta_africana
ENSVPAG00000006642	YRDC	87	72.683	ENSMFAG00000003487	YRDC	97	72.683	Macaca_fascicularis
ENSVPAG00000006642	YRDC	97	73.568	ENSMMUG00000005372	YRDC	63	74.468	Macaca_mulatta
ENSVPAG00000006642	YRDC	97	73.568	ENSMNEG00000029348	YRDC	84	74.468	Macaca_nemestrina
ENSVPAG00000006642	YRDC	96	47.577	ENSMAMG00000007315	yrdc	83	47.577	Mastacembelus_armatus
ENSVPAG00000006642	YRDC	97	45.614	ENSMZEG00005006948	yrdc	84	45.614	Maylandia_zebra
ENSVPAG00000006642	YRDC	85	54.726	ENSMGAG00000002833	YRDC	98	54.726	Meleagris_gallopavo
ENSVPAG00000006642	YRDC	97	74.890	ENSMICG00000031688	YRDC	85	75.745	Microcebus_murinus
ENSVPAG00000006642	YRDC	70	66.258	ENSMOCG00000000164	-	67	67.251	Microtus_ochrogaster
ENSVPAG00000006642	YRDC	87	50.980	ENSMMOG00000002119	yrdc	76	50.980	Mola_mola
ENSVPAG00000006642	YRDC	97	59.402	ENSMODG00000017750	YRDC	83	59.402	Monodelphis_domestica
ENSVPAG00000006642	YRDC	97	47.807	ENSMALG00000012471	yrdc	85	47.807	Monopterus_albus
ENSVPAG00000006642	YRDC	94	73.394	MGP_CAROLIEiJ_G0026453	Yrdc	83	94.253	Mus_caroli
ENSVPAG00000006642	YRDC	100	72.766	ENSMUSG00000028889	Yrdc	85	94.382	Mus_musculus
ENSVPAG00000006642	YRDC	100	72.766	MGP_PahariEiJ_G0028784	Yrdc	85	94.382	Mus_pahari
ENSVPAG00000006642	YRDC	100	73.191	MGP_SPRETEiJ_G0027432	Yrdc	84	73.191	Mus_spretus
ENSVPAG00000006642	YRDC	88	73.430	ENSMPUG00000014542	YRDC	83	73.430	Mustela_putorius_furo
ENSVPAG00000006642	YRDC	95	56.951	ENSMLUG00000028796	-	79	56.951	Myotis_lucifugus
ENSVPAG00000006642	YRDC	83	64.615	ENSMLUG00000024310	-	96	64.615	Myotis_lucifugus
ENSVPAG00000006642	YRDC	100	73.191	ENSMLUG00000000955	-	84	73.191	Myotis_lucifugus
ENSVPAG00000006642	YRDC	93	70.776	ENSNGAG00000019099	Yrdc	78	70.776	Nannospalax_galili
ENSVPAG00000006642	YRDC	97	46.053	ENSNBRG00000009475	yrdc	85	46.053	Neolamprologus_brichardi
ENSVPAG00000006642	YRDC	97	74.449	ENSNLEG00000011665	YRDC	85	75.319	Nomascus_leucogenys
ENSVPAG00000006642	YRDC	88	64.423	ENSMEUG00000005068	YRDC	97	64.423	Notamacropus_eugenii
ENSVPAG00000006642	YRDC	97	73.451	ENSODEG00000007401	YRDC	85	91.011	Octodon_degus
ENSVPAG00000006642	YRDC	97	45.175	ENSONIG00000016213	yrdc	95	45.175	Oreochromis_niloticus
ENSVPAG00000006642	YRDC	96	74.779	ENSOCUG00000005384	YRDC	80	75.641	Oryctolagus_cuniculus
ENSVPAG00000006642	YRDC	97	45.259	ENSORLG00000014393	yrdc	86	45.259	Oryzias_latipes
ENSVPAG00000006642	YRDC	97	44.783	ENSORLG00020019663	yrdc	86	44.783	Oryzias_latipes_hni
ENSVPAG00000006642	YRDC	97	43.478	ENSORLG00015004625	yrdc	86	43.478	Oryzias_latipes_hsok
ENSVPAG00000006642	YRDC	97	45.614	ENSOMEG00000018550	yrdc	86	45.614	Oryzias_melastigma
ENSVPAG00000006642	YRDC	100	72.766	ENSOGAG00000030474	YRDC	85	72.766	Otolemur_garnettii
ENSVPAG00000006642	YRDC	100	75.214	ENSOARG00000019873	YRDC	84	75.214	Ovis_aries
ENSVPAG00000006642	YRDC	97	74.449	ENSPPRG00000007752	YRDC	84	75.319	Panthera_pardus
ENSVPAG00000006642	YRDC	97	74.009	ENSPTRG00000000557	YRDC	84	74.894	Pan_troglodytes
ENSVPAG00000006642	YRDC	97	73.568	ENSPANG00000006487	YRDC	63	74.468	Papio_anubis
ENSVPAG00000006642	YRDC	86	50.739	ENSPKIG00000004574	yrdc	74	50.739	Paramormyrops_kingsleyae
ENSVPAG00000006642	YRDC	97	48.035	ENSPSIG00000006483	YRDC	81	48.035	Pelodiscus_sinensis
ENSVPAG00000006642	YRDC	93	46.759	ENSPMGG00000004184	yrdc	82	46.759	Periophthalmus_magnuspinnatus
ENSVPAG00000006642	YRDC	74	67.816	ENSPEMG00000016985	Yrdc	90	58.559	Peromyscus_maniculatus_bairdii
ENSVPAG00000006642	YRDC	76	44.382	ENSPMAG00000002905	yrdc	96	44.382	Petromyzon_marinus
ENSVPAG00000006642	YRDC	99	62.343	ENSPCIG00000025731	YRDC	86	62.343	Phascolarctos_cinereus
ENSVPAG00000006642	YRDC	97	44.589	ENSPFOG00000023097	yrdc	85	44.589	Poecilia_formosa
ENSVPAG00000006642	YRDC	97	44.156	ENSPLAG00000020882	yrdc	85	44.156	Poecilia_latipinna
ENSVPAG00000006642	YRDC	97	44.589	ENSPMEG00000013237	yrdc	86	44.589	Poecilia_mexicana
ENSVPAG00000006642	YRDC	97	44.156	ENSPREG00000005285	yrdc	85	44.156	Poecilia_reticulata
ENSVPAG00000006642	YRDC	99	71.121	ENSPPYG00000001523	-	95	71.121	Pongo_abelii
ENSVPAG00000006642	YRDC	99	70.940	ENSPCAG00000016850	YRDC	84	70.940	Procavia_capensis
ENSVPAG00000006642	YRDC	100	75.745	ENSPCOG00000013214	YRDC	84	75.745	Propithecus_coquereli
ENSVPAG00000006642	YRDC	100	74.043	ENSPVAG00000010147	YRDC	84	74.043	Pteropus_vampyrus
ENSVPAG00000006642	YRDC	97	46.053	ENSPNYG00000013956	yrdc	84	46.053	Pundamilia_nyererei
ENSVPAG00000006642	YRDC	90	46.667	ENSPNAG00000015625	yrdc	85	46.667	Pygocentrus_nattereri
ENSVPAG00000006642	YRDC	96	72.566	ENSRNOG00000025424	Yrdc	84	73.191	Rattus_norvegicus
ENSVPAG00000006642	YRDC	97	74.009	ENSRBIG00000032289	YRDC	84	74.894	Rhinopithecus_bieti
ENSVPAG00000006642	YRDC	87	73.039	ENSRROG00000039370	YRDC	69	73.039	Rhinopithecus_roxellana
ENSVPAG00000006642	YRDC	91	68.075	ENSSBOG00000018937	YRDC	91	68.075	Saimiri_boliviensis_boliviensis
ENSVPAG00000006642	YRDC	88	49.515	ENSSFOG00015006128	yrdc	88	49.515	Scleropages_formosus
ENSVPAG00000006642	YRDC	90	49.767	ENSSMAG00000005195	yrdc	80	49.767	Scophthalmus_maximus
ENSVPAG00000006642	YRDC	87	51.471	ENSSDUG00000009775	yrdc	75	51.471	Seriola_dumerili
ENSVPAG00000006642	YRDC	87	51.471	ENSSLDG00000003196	yrdc	75	51.471	Seriola_lalandi_dorsalis
ENSVPAG00000006642	YRDC	97	48.684	ENSSPUG00000003946	YRDC	86	48.684	Sphenodon_punctatus
ENSVPAG00000006642	YRDC	97	46.087	ENSSPAG00000012559	yrdc	85	46.087	Stegastes_partitus
ENSVPAG00000006642	YRDC	97	75.221	ENSSSCG00000040425	YRDC	84	76.068	Sus_scrofa
ENSVPAG00000006642	YRDC	83	46.429	ENSTRUG00000005923	yrdc	86	44.492	Takifugu_rubripes
ENSVPAG00000006642	YRDC	68	67.089	ENSTBEG00000008863	YRDC	100	67.089	Tupaia_belangeri
ENSVPAG00000006642	YRDC	85	73.500	ENSUAMG00000006150	YRDC	99	73.500	Ursus_americanus
ENSVPAG00000006642	YRDC	97	48.696	ENSXETG00000014420	yrdc	97	48.696	Xenopus_tropicalis
ENSVPAG00000006642	YRDC	97	43.723	ENSXCOG00000000829	yrdc	95	43.723	Xiphophorus_couchianus
ENSVPAG00000006642	YRDC	97	42.857	ENSXMAG00000014606	yrdc	80	42.857	Xiphophorus_maculatus