EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000006763 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 142598 bases
Position: chrGeneScaffold_2012:111071-253668
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000006285	MIF4G	PF02854.19	1.6e-68	1	3
ENSVPAP00000006285	MIF4G	PF02854.19	1.6e-68	2	3
ENSVPAP00000006285	MIF4G	PF02854.19	1.6e-68	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006765	UPF2-201	3804	-	ENSVPAP00000006285	1268 (aa)	-	UPI00018BDC7F

Gene Model

Click here to download ENSVPAG00000006763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006763's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006763	UPF2	85	96.774	ENSG00000151461	UPF2	85	96.774	Homo_sapiens
ENSVPAG00000006763	UPF2	82	96.774	ENSAPOG00000015837	UPF2	84	96.774	Acanthochromis_polyacanthus
ENSVPAG00000006763	UPF2	85	96.774	ENSAMEG00000004586	UPF2	85	96.774	Ailuropoda_melanoleuca
ENSVPAG00000006763	UPF2	85	96.774	ENSACIG00000018078	UPF2	83	96.774	Amphilophus_citrinellus
ENSVPAG00000006763	UPF2	85	96.774	ENSAOCG00000016766	UPF2	84	96.774	Amphiprion_ocellaris
ENSVPAG00000006763	UPF2	85	96.774	ENSAPEG00000019084	UPF2	84	96.774	Amphiprion_percula
ENSVPAG00000006763	UPF2	85	96.774	ENSATEG00000021677	UPF2	82	96.774	Anabas_testudineus
ENSVPAG00000006763	UPF2	84	96.774	ENSAPLG00000010287	UPF2	74	96.774	Anas_platyrhynchos
ENSVPAG00000006763	UPF2	86	96.774	ENSACAG00000009259	UPF2	85	96.774	Anolis_carolinensis
ENSVPAG00000006763	UPF2	86	96.774	ENSANAG00000028451	UPF2	85	96.774	Aotus_nancymaae
ENSVPAG00000006763	UPF2	85	96.774	ENSACLG00000012696	UPF2	83	96.774	Astatotilapia_calliptera
ENSVPAG00000006763	UPF2	85	96.774	ENSAMXG00000013700	UPF2	82	96.774	Astyanax_mexicanus
ENSVPAG00000006763	UPF2	85	96.774	ENSBTAG00000000288	UPF2	89	96.774	Bos_taurus
ENSVPAG00000006763	UPF2	85	96.774	ENSCJAG00000020685	UPF2	86	96.774	Callithrix_jacchus
ENSVPAG00000006763	UPF2	85	96.774	ENSCAFG00000004839	UPF2	85	96.774	Canis_familiaris
ENSVPAG00000006763	UPF2	86	96.774	ENSCAFG00020005882	UPF2	98	94.955	Canis_lupus_dingo
ENSVPAG00000006763	UPF2	85	96.774	ENSCHIG00000020359	UPF2	85	96.774	Capra_hircus
ENSVPAG00000006763	UPF2	85	96.774	ENSTSYG00000000935	UPF2	87	96.774	Carlito_syrichta
ENSVPAG00000006763	UPF2	77	96.774	ENSCAPG00000016658	UPF2	81	96.774	Cavia_aperea
ENSVPAG00000006763	UPF2	84	96.774	ENSCPOG00000008809	UPF2	85	96.774	Cavia_porcellus
ENSVPAG00000006763	UPF2	85	96.774	ENSCCAG00000035991	UPF2	85	96.774	Cebus_capucinus
ENSVPAG00000006763	UPF2	85	96.774	ENSCATG00000032679	UPF2	85	96.774	Cercocebus_atys
ENSVPAG00000006763	UPF2	85	96.774	ENSCLAG00000011434	UPF2	85	96.774	Chinchilla_lanigera
ENSVPAG00000006763	UPF2	85	96.774	ENSCSAG00000013372	UPF2	85	96.774	Chlorocebus_sabaeus
ENSVPAG00000006763	UPF2	69	96.774	ENSCHOG00000000422	UPF2	71	96.774	Choloepus_hoffmanni
ENSVPAG00000006763	UPF2	85	96.774	ENSCPBG00000027823	UPF2	86	96.774	Chrysemys_picta_bellii
ENSVPAG00000006763	UPF2	64	79.310	ENSCSAVG00000007772	-	78	79.310	Ciona_savignyi
ENSVPAG00000006763	UPF2	85	96.774	ENSCANG00000040396	UPF2	87	96.774	Colobus_angolensis_palliatus
ENSVPAG00000006763	UPF2	85	96.774	ENSCGRG00001019347	Upf2	85	96.774	Cricetulus_griseus_chok1gshd
ENSVPAG00000006763	UPF2	85	96.774	ENSCGRG00000017993	Upf2	85	96.774	Cricetulus_griseus_crigri
ENSVPAG00000006763	UPF2	73	96.774	ENSCSEG00000003520	UPF2	82	96.774	Cynoglossus_semilaevis
ENSVPAG00000006763	UPF2	85	96.774	ENSCVAG00000006167	UPF2	82	96.774	Cyprinodon_variegatus
ENSVPAG00000006763	UPF2	85	96.774	ENSDNOG00000018160	UPF2	85	96.774	Dasypus_novemcinctus
ENSVPAG00000006763	UPF2	85	96.774	ENSDORG00000002478	Upf2	85	96.774	Dipodomys_ordii
ENSVPAG00000006763	UPF2	72	37.179	FBgn0029992	Upf2	73	37.268	Drosophila_melanogaster
ENSVPAG00000006763	UPF2	58	100.000	ENSETEG00000011583	-	52	100.000	Echinops_telfairi
ENSVPAG00000006763	UPF2	55	87.097	ENSEBUG00000012448	-	74	87.097	Eptatretus_burgeri
ENSVPAG00000006763	UPF2	85	96.774	ENSEASG00005019274	UPF2	85	96.774	Equus_asinus_asinus
ENSVPAG00000006763	UPF2	85	96.774	ENSECAG00000017022	UPF2	85	96.774	Equus_caballus
ENSVPAG00000006763	UPF2	67	96.774	ENSEEUG00000007819	UPF2	66	96.774	Erinaceus_europaeus
ENSVPAG00000006763	UPF2	85	96.774	ENSELUG00000012014	UPF2	82	96.774	Esox_lucius
ENSVPAG00000006763	UPF2	86	96.774	ENSFCAG00000005785	UPF2	85	96.774	Felis_catus
ENSVPAG00000006763	UPF2	85	96.774	ENSFALG00000001889	UPF2	83	96.774	Ficedula_albicollis
ENSVPAG00000006763	UPF2	85	96.774	ENSFDAG00000014348	UPF2	85	96.774	Fukomys_damarensis
ENSVPAG00000006763	UPF2	84	96.774	ENSFHEG00000009826	UPF2	82	96.774	Fundulus_heteroclitus
ENSVPAG00000006763	UPF2	74	96.774	ENSGMOG00000005557	UPF2	74	96.774	Gadus_morhua
ENSVPAG00000006763	UPF2	85	96.774	ENSGALG00000033772	UPF2	85	96.774	Gallus_gallus
ENSVPAG00000006763	UPF2	85	96.774	ENSGAFG00000020867	UPF2	82	96.774	Gambusia_affinis
ENSVPAG00000006763	UPF2	76	96.774	ENSGACG00000001080	UPF2	83	96.774	Gasterosteus_aculeatus
ENSVPAG00000006763	UPF2	85	96.774	ENSGAGG00000002700	UPF2	85	96.774	Gopherus_agassizii
ENSVPAG00000006763	UPF2	85	96.774	ENSGGOG00000001479	UPF2	85	96.774	Gorilla_gorilla
ENSVPAG00000006763	UPF2	85	96.774	ENSHBUG00000004249	UPF2	83	96.774	Haplochromis_burtoni
ENSVPAG00000006763	UPF2	83	96.774	ENSHGLG00000015176	-	85	96.774	Heterocephalus_glaber_female
ENSVPAG00000006763	UPF2	83	96.774	ENSHGLG00000003822	-	82	96.774	Heterocephalus_glaber_female
ENSVPAG00000006763	UPF2	83	96.774	ENSHGLG00100010036	UPF2	85	96.774	Heterocephalus_glaber_male
ENSVPAG00000006763	UPF2	86	93.548	ENSHCOG00000004025	UPF2	82	93.548	Hippocampus_comes
ENSVPAG00000006763	UPF2	85	96.774	ENSIPUG00000015524	UPF2	83	96.774	Ictalurus_punctatus
ENSVPAG00000006763	UPF2	85	96.774	ENSSTOG00000013075	UPF2	85	96.774	Ictidomys_tridecemlineatus
ENSVPAG00000006763	UPF2	83	96.774	ENSJJAG00000004913	Upf2	83	96.774	Jaculus_jaculus
ENSVPAG00000006763	UPF2	77	93.548	ENSKMAG00000001071	UPF2	81	93.548	Kryptolebias_marmoratus
ENSVPAG00000006763	UPF2	77	96.774	ENSLBEG00000016394	-	86	96.774	Labrus_bergylta
ENSVPAG00000006763	UPF2	80	79.273	ENSLBEG00000000728	-	93	79.371	Labrus_bergylta
ENSVPAG00000006763	UPF2	82	96.774	ENSLACG00000015945	UPF2	82	96.774	Latimeria_chalumnae
ENSVPAG00000006763	UPF2	84	96.774	ENSLOCG00000015698	UPF2	82	96.774	Lepisosteus_oculatus
ENSVPAG00000006763	UPF2	85	96.774	ENSMFAG00000043865	UPF2	86	96.774	Macaca_fascicularis
ENSVPAG00000006763	UPF2	85	96.774	ENSMMUG00000008241	UPF2	85	96.774	Macaca_mulatta
ENSVPAG00000006763	UPF2	81	92.878	ENSMNEG00000008062	UPF2	99	93.144	Macaca_nemestrina
ENSVPAG00000006763	UPF2	85	96.774	ENSMLEG00000036120	UPF2	85	96.774	Mandrillus_leucophaeus
ENSVPAG00000006763	UPF2	85	96.774	ENSMAMG00000018276	UPF2	84	96.774	Mastacembelus_armatus
ENSVPAG00000006763	UPF2	85	96.774	ENSMZEG00005021595	UPF2	83	96.774	Maylandia_zebra
ENSVPAG00000006763	UPF2	85	96.774	ENSMGAG00000004573	UPF2	85	96.774	Meleagris_gallopavo
ENSVPAG00000006763	UPF2	85	96.774	ENSMAUG00000016512	Upf2	85	96.774	Mesocricetus_auratus
ENSVPAG00000006763	UPF2	82	96.774	ENSMICG00000001716	UPF2	86	96.774	Microcebus_murinus
ENSVPAG00000006763	UPF2	85	96.774	ENSMOCG00000008263	Upf2	85	96.774	Microtus_ochrogaster
ENSVPAG00000006763	UPF2	72	93.548	ENSMMOG00000006528	UPF2	84	93.548	Mola_mola
ENSVPAG00000006763	UPF2	85	96.774	ENSMODG00000016794	UPF2	85	96.774	Monodelphis_domestica
ENSVPAG00000006763	UPF2	85	96.774	ENSMALG00000002663	UPF2	84	96.774	Monopterus_albus
ENSVPAG00000006763	UPF2	85	96.774	MGP_CAROLIEiJ_G0023157	Upf2	85	96.774	Mus_caroli
ENSVPAG00000006763	UPF2	85	96.774	ENSMUSG00000043241	Upf2	85	96.774	Mus_musculus
ENSVPAG00000006763	UPF2	85	96.774	MGP_PahariEiJ_G0019217	Upf2	85	96.774	Mus_pahari
ENSVPAG00000006763	UPF2	85	96.774	MGP_SPRETEiJ_G0024075	Upf2	85	96.774	Mus_spretus
ENSVPAG00000006763	UPF2	85	96.774	ENSMPUG00000001064	UPF2	85	96.774	Mustela_putorius_furo
ENSVPAG00000006763	UPF2	85	96.774	ENSMLUG00000000228	UPF2	85	96.774	Myotis_lucifugus
ENSVPAG00000006763	UPF2	85	96.774	ENSNBRG00000013629	UPF2	83	96.774	Neolamprologus_brichardi
ENSVPAG00000006763	UPF2	85	96.774	ENSNLEG00000012058	UPF2	86	96.774	Nomascus_leucogenys
ENSVPAG00000006763	UPF2	62	100.000	ENSOPRG00000006801	-	62	100.000	Ochotona_princeps
ENSVPAG00000006763	UPF2	85	96.774	ENSODEG00000001290	UPF2	85	96.774	Octodon_degus
ENSVPAG00000006763	UPF2	85	96.774	ENSONIG00000017991	UPF2	83	96.774	Oreochromis_niloticus
ENSVPAG00000006763	UPF2	85	96.774	ENSOCUG00000006230	UPF2	85	96.774	Oryctolagus_cuniculus
ENSVPAG00000006763	UPF2	85	90.323	ENSORLG00000017189	UPF2	82	90.323	Oryzias_latipes
ENSVPAG00000006763	UPF2	85	90.323	ENSORLG00020005969	UPF2	82	90.323	Oryzias_latipes_hni
ENSVPAG00000006763	UPF2	85	90.323	ENSORLG00015005713	UPF2	82	90.323	Oryzias_latipes_hsok
ENSVPAG00000006763	UPF2	85	90.323	ENSOMEG00000023420	UPF2	80	90.323	Oryzias_melastigma
ENSVPAG00000006763	UPF2	85	96.774	ENSOGAG00000005796	UPF2	85	96.774	Otolemur_garnettii
ENSVPAG00000006763	UPF2	85	96.774	ENSOARG00000014587	UPF2	85	96.774	Ovis_aries
ENSVPAG00000006763	UPF2	85	96.774	ENSPPAG00000037953	UPF2	85	96.774	Pan_paniscus
ENSVPAG00000006763	UPF2	86	96.774	ENSPPRG00000000690	UPF2	85	96.774	Panthera_pardus
ENSVPAG00000006763	UPF2	86	96.774	ENSPTIG00000008867	UPF2	85	96.774	Panthera_tigris_altaica
ENSVPAG00000006763	UPF2	85	96.774	ENSPTRG00000002291	UPF2	85	96.774	Pan_troglodytes
ENSVPAG00000006763	UPF2	85	96.774	ENSPANG00000023399	UPF2	85	96.774	Papio_anubis
ENSVPAG00000006763	UPF2	85	96.774	ENSPKIG00000025502	UPF2	82	96.774	Paramormyrops_kingsleyae
ENSVPAG00000006763	UPF2	59	88.446	ENSPSIG00000015158	UPF2	95	88.446	Pelodiscus_sinensis
ENSVPAG00000006763	UPF2	86	93.548	ENSPMGG00000005259	UPF2	82	93.548	Periophthalmus_magnuspinnatus
ENSVPAG00000006763	UPF2	78	96.774	ENSPEMG00000015731	Upf2	85	96.774	Peromyscus_maniculatus_bairdii
ENSVPAG00000006763	UPF2	85	96.774	ENSPCIG00000006656	UPF2	85	96.774	Phascolarctos_cinereus
ENSVPAG00000006763	UPF2	85	96.774	ENSPFOG00000017118	UPF2	82	96.774	Poecilia_formosa
ENSVPAG00000006763	UPF2	85	96.774	ENSPLAG00000005094	UPF2	82	96.774	Poecilia_latipinna
ENSVPAG00000006763	UPF2	85	96.774	ENSPMEG00000017009	UPF2	82	96.774	Poecilia_mexicana
ENSVPAG00000006763	UPF2	85	96.774	ENSPREG00000021880	UPF2	82	96.774	Poecilia_reticulata
ENSVPAG00000006763	UPF2	51	96.774	ENSPPYG00000002089	-	77	96.774	Pongo_abelii
ENSVPAG00000006763	UPF2	85	96.774	ENSPCAG00000000684	UPF2	85	96.774	Procavia_capensis
ENSVPAG00000006763	UPF2	83	96.774	ENSPCOG00000021656	UPF2	87	96.774	Propithecus_coquereli
ENSVPAG00000006763	UPF2	85	96.774	ENSPVAG00000017286	UPF2	85	96.774	Pteropus_vampyrus
ENSVPAG00000006763	UPF2	85	96.774	ENSPNYG00000017096	UPF2	82	96.774	Pundamilia_nyererei
ENSVPAG00000006763	UPF2	85	96.774	ENSPNAG00000009357	UPF2	83	96.774	Pygocentrus_nattereri
ENSVPAG00000006763	UPF2	85	96.774	ENSRNOG00000023593	Upf2	85	96.774	Rattus_norvegicus
ENSVPAG00000006763	UPF2	85	96.774	ENSRBIG00000037780	UPF2	85	96.774	Rhinopithecus_bieti
ENSVPAG00000006763	UPF2	85	96.774	ENSRROG00000043547	UPF2	85	96.774	Rhinopithecus_roxellana
ENSVPAG00000006763	UPF2	85	96.774	ENSSBOG00000020012	UPF2	87	96.774	Saimiri_boliviensis_boliviensis
ENSVPAG00000006763	UPF2	85	96.774	ENSSFOG00015023788	upf2	82	96.774	Scleropages_formosus
ENSVPAG00000006763	UPF2	76	96.774	ENSSMAG00000007637	UPF2	82	96.774	Scophthalmus_maximus
ENSVPAG00000006763	UPF2	86	96.774	ENSSDUG00000017244	UPF2	85	96.774	Seriola_dumerili
ENSVPAG00000006763	UPF2	82	96.774	ENSSLDG00000016866	UPF2	84	96.774	Seriola_lalandi_dorsalis
ENSVPAG00000006763	UPF2	86	96.774	ENSSARG00000008615	UPF2	85	96.774	Sorex_araneus
ENSVPAG00000006763	UPF2	85	96.774	ENSSPUG00000014544	UPF2	83	96.774	Sphenodon_punctatus
ENSVPAG00000006763	UPF2	54	96.774	ENSSSCG00000011117	-	83	96.774	Sus_scrofa
ENSVPAG00000006763	UPF2	86	96.774	ENSTGUG00000002163	-	85	96.774	Taeniopygia_guttata
ENSVPAG00000006763	UPF2	85	96.774	ENSTRUG00000007519	UPF2	82	96.774	Takifugu_rubripes
ENSVPAG00000006763	UPF2	86	96.774	ENSTNIG00000004453	UPF2	82	96.774	Tetraodon_nigroviridis
ENSVPAG00000006763	UPF2	83	85.578	ENSTBEG00000012679	UPF2	82	85.578	Tupaia_belangeri
ENSVPAG00000006763	UPF2	85	96.774	ENSTTRG00000016388	UPF2	85	96.774	Tursiops_truncatus
ENSVPAG00000006763	UPF2	83	96.774	ENSUAMG00000023560	UPF2	93	96.774	Ursus_americanus
ENSVPAG00000006763	UPF2	85	96.774	ENSUMAG00000012953	UPF2	81	96.774	Ursus_maritimus
ENSVPAG00000006763	UPF2	85	96.774	ENSVVUG00000006166	UPF2	88	95.224	Vulpes_vulpes
ENSVPAG00000006763	UPF2	86	96.774	ENSXETG00000033103	UPF2	83	96.774	Xenopus_tropicalis
ENSVPAG00000006763	UPF2	77	96.774	ENSXCOG00000011604	UPF2	83	96.774	Xiphophorus_couchianus
ENSVPAG00000006763	UPF2	77	96.774	ENSXMAG00000017209	UPF2	82	96.774	Xiphophorus_maculatus