EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000006778 (Gene tree)
Gene ID: -
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 18395 bases
Position: chrGeneScaffold_1224:271104-289498
Accession: 30813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000006298	RRM_1	PF00076.22	3.3e-21	1	2
ENSVPAP00000006298	RRM_1	PF00076.22	3.3e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006778	TRNAU1AP-201	876	-	ENSVPAP00000006298	291 (aa)	-	UPI00018BDE15

Gene Model

Click here to download ENSVPAG00000006778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSG00000180098	TRNAU1AP	100	89.041	Homo_sapiens
ENSVPAG00000006778	TRNAU1AP	99	51.111	ENSAPOG00000007148	TRNAU1AP	98	51.111	Acanthochromis_polyacanthus
ENSVPAG00000006778	TRNAU1AP	100	88.014	ENSAMEG00000011367	TRNAU1AP	100	88.014	Ailuropoda_melanoleuca
ENSVPAG00000006778	TRNAU1AP	99	53.398	ENSACIG00000004161	trnau1apa	98	52.475	Amphilophus_citrinellus
ENSVPAG00000006778	TRNAU1AP	99	51.111	ENSAOCG00000008056	trnau1apa	98	51.111	Amphiprion_ocellaris
ENSVPAG00000006778	TRNAU1AP	99	51.111	ENSAPEG00000008868	trnau1apa	98	51.133	Amphiprion_percula
ENSVPAG00000006778	TRNAU1AP	97	53.512	ENSATEG00000012140	trnau1apa	98	50.321	Anabas_testudineus
ENSVPAG00000006778	TRNAU1AP	96	82.734	ENSAPLG00000002606	TRNAU1AP	99	82.734	Anas_platyrhynchos
ENSVPAG00000006778	TRNAU1AP	99	65.862	ENSACAG00000003995	-	99	65.862	Anolis_carolinensis
ENSVPAG00000006778	TRNAU1AP	66	52.083	ENSACAG00000004205	-	73	52.083	Anolis_carolinensis
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSANAG00000018976	TRNAU1AP	100	89.041	Aotus_nancymaae
ENSVPAG00000006778	TRNAU1AP	99	51.603	ENSACLG00000018515	trnau1apa	98	52.396	Astatotilapia_calliptera
ENSVPAG00000006778	TRNAU1AP	95	42.708	ENSAMXG00000029240	-	97	42.708	Astyanax_mexicanus
ENSVPAG00000006778	TRNAU1AP	80	56.540	ENSAMXG00000013750	trnau1apa	77	56.540	Astyanax_mexicanus
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSBTAG00000010393	TRNAU1AP	100	88.699	Bos_taurus
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSCJAG00000009717	TRNAU1AP	100	89.041	Callithrix_jacchus
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSCAFG00000011735	TRNAU1AP	100	88.699	Canis_familiaris
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSCAFG00020023584	TRNAU1AP	100	88.699	Canis_lupus_dingo
ENSVPAG00000006778	TRNAU1AP	100	88.356	ENSCHIG00000023215	TRNAU1AP	100	88.356	Capra_hircus
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSTSYG00000003506	TRNAU1AP	100	88.699	Carlito_syrichta
ENSVPAG00000006778	TRNAU1AP	100	88.356	ENSCPOG00000001925	TRNAU1AP	100	88.356	Cavia_porcellus
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSCCAG00000037506	TRNAU1AP	100	89.041	Cebus_capucinus
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSCATG00000044617	TRNAU1AP	100	88.699	Cercocebus_atys
ENSVPAG00000006778	TRNAU1AP	100	87.671	ENSCLAG00000008223	TRNAU1AP	100	87.671	Chinchilla_lanigera
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSCSAG00000001014	TRNAU1AP	100	88.699	Chlorocebus_sabaeus
ENSVPAG00000006778	TRNAU1AP	84	95.510	ENSCPBG00000000121	TRNAU1AP	89	95.510	Chrysemys_picta_bellii
ENSVPAG00000006778	TRNAU1AP	68	36.245	ENSCSAVG00000011781	-	98	38.865	Ciona_savignyi
ENSVPAG00000006778	TRNAU1AP	100	79.110	ENSCANG00000041949	TRNAU1AP	100	100.000	Colobus_angolensis_palliatus
ENSVPAG00000006778	TRNAU1AP	100	88.356	ENSCGRG00001004713	Trnau1ap	100	88.356	Cricetulus_griseus_chok1gshd
ENSVPAG00000006778	TRNAU1AP	100	88.356	ENSCGRG00000014532	Trnau1ap	100	88.356	Cricetulus_griseus_crigri
ENSVPAG00000006778	TRNAU1AP	98	51.634	ENSCSEG00000006663	trnau1apa	96	50.325	Cynoglossus_semilaevis
ENSVPAG00000006778	TRNAU1AP	97	50.329	ENSCVAG00000018069	trnau1apa	94	49.835	Cyprinodon_variegatus
ENSVPAG00000006778	TRNAU1AP	96	46.075	ENSDARG00000101323	trnau1apa	89	44.558	Danio_rerio
ENSVPAG00000006778	TRNAU1AP	66	65.482	ENSDNOG00000047959	-	94	66.667	Dasypus_novemcinctus
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSDNOG00000033009	TRNAU1AP	100	88.699	Dasypus_novemcinctus
ENSVPAG00000006778	TRNAU1AP	99	81.379	ENSDORG00000006349	Trnau1ap	100	86.441	Dipodomys_ordii
ENSVPAG00000006778	TRNAU1AP	84	94.694	ENSETEG00000012594	TRNAU1AP	100	94.694	Echinops_telfairi
ENSVPAG00000006778	TRNAU1AP	56	39.130	ENSEBUG00000006349	-	60	39.130	Eptatretus_burgeri
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSEASG00005010062	TRNAU1AP	100	89.041	Equus_asinus_asinus
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSECAG00000012980	TRNAU1AP	100	89.041	Equus_caballus
ENSVPAG00000006778	TRNAU1AP	97	55.034	ENSELUG00000017686	trnau1apa	94	54.698	Esox_lucius
ENSVPAG00000006778	TRNAU1AP	77	73.585	ENSELUG00000022790	-	95	64.583	Esox_lucius
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSFCAG00000013401	TRNAU1AP	100	89.041	Felis_catus
ENSVPAG00000006778	TRNAU1AP	84	94.286	ENSFALG00000001371	TRNAU1AP	89	94.286	Ficedula_albicollis
ENSVPAG00000006778	TRNAU1AP	100	88.014	ENSFDAG00000018599	TRNAU1AP	100	88.014	Fukomys_damarensis
ENSVPAG00000006778	TRNAU1AP	80	52.846	ENSFHEG00000018232	trnau1apa	86	49.231	Fundulus_heteroclitus
ENSVPAG00000006778	TRNAU1AP	96	47.315	ENSGMOG00000016508	trnau1apa	93	48.311	Gadus_morhua
ENSVPAG00000006778	TRNAU1AP	67	49.296	ENSGALG00000012721	C2H6orf52	95	44.788	Gallus_gallus
ENSVPAG00000006778	TRNAU1AP	100	83.562	ENSGALG00000001310	-	100	83.562	Gallus_gallus
ENSVPAG00000006778	TRNAU1AP	79	49.200	ENSGAFG00000004928	trnau1apa	90	50.000	Gambusia_affinis
ENSVPAG00000006778	TRNAU1AP	98	52.961	ENSGACG00000001443	trnau1apa	96	52.145	Gasterosteus_aculeatus
ENSVPAG00000006778	TRNAU1AP	84	95.918	ENSGAGG00000004940	TRNAU1AP	89	95.918	Gopherus_agassizii
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSGGOG00000003511	TRNAU1AP	100	89.041	Gorilla_gorilla
ENSVPAG00000006778	TRNAU1AP	99	51.961	ENSHBUG00000002510	trnau1apa	98	52.769	Haplochromis_burtoni
ENSVPAG00000006778	TRNAU1AP	100	88.014	ENSHGLG00000010380	TRNAU1AP	100	88.014	Heterocephalus_glaber_female
ENSVPAG00000006778	TRNAU1AP	84	98.776	ENSHGLG00100012699	TRNAU1AP	86	98.776	Heterocephalus_glaber_male
ENSVPAG00000006778	TRNAU1AP	100	51.316	ENSHCOG00000014770	trnau1apa	97	49.515	Hippocampus_comes
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSSTOG00000000079	TRNAU1AP	100	89.041	Ictidomys_tridecemlineatus
ENSVPAG00000006778	TRNAU1AP	100	88.014	ENSJJAG00000010128	Trnau1ap	100	88.014	Jaculus_jaculus
ENSVPAG00000006778	TRNAU1AP	96	52.492	ENSKMAG00000001230	trnau1apa	79	58.130	Kryptolebias_marmoratus
ENSVPAG00000006778	TRNAU1AP	96	54.762	ENSLBEG00000011683	trnau1apa	94	53.898	Labrus_bergylta
ENSVPAG00000006778	TRNAU1AP	100	63.636	ENSLACG00000005541	TRNAU1AP	99	64.261	Latimeria_chalumnae
ENSVPAG00000006778	TRNAU1AP	99	63.699	ENSLOCG00000004041	trnau1apa	99	62.671	Lepisosteus_oculatus
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSLAFG00000007628	TRNAU1AP	100	89.041	Loxodonta_africana
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSMFAG00000043751	TRNAU1AP	100	88.699	Macaca_fascicularis
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSMMUG00000006561	TRNAU1AP	100	88.699	Macaca_mulatta
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSMNEG00000044201	TRNAU1AP	100	88.699	Macaca_nemestrina
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSMLEG00000015649	TRNAU1AP	100	88.699	Mandrillus_leucophaeus
ENSVPAG00000006778	TRNAU1AP	99	51.724	ENSMAMG00000001247	trnau1apa	99	50.470	Mastacembelus_armatus
ENSVPAG00000006778	TRNAU1AP	99	51.603	ENSMZEG00005017722	trnau1apa	98	52.396	Maylandia_zebra
ENSVPAG00000006778	TRNAU1AP	84	93.469	ENSMGAG00000002105	TRNAU1AP	88	93.469	Meleagris_gallopavo
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSMICG00000008386	TRNAU1AP	100	99.435	Microcebus_murinus
ENSVPAG00000006778	TRNAU1AP	100	88.014	ENSMOCG00000011189	Trnau1ap	100	88.014	Microtus_ochrogaster
ENSVPAG00000006778	TRNAU1AP	96	49.648	ENSMMOG00000012107	trnau1apa	79	55.274	Mola_mola
ENSVPAG00000006778	TRNAU1AP	100	84.932	ENSMODG00000010927	TRNAU1AP	100	84.932	Monodelphis_domestica
ENSVPAG00000006778	TRNAU1AP	97	53.443	ENSMALG00000016778	trnau1apa	94	50.820	Monopterus_albus
ENSVPAG00000006778	TRNAU1AP	100	88.014	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	88.014	Mus_caroli
ENSVPAG00000006778	TRNAU1AP	100	88.014	ENSMUSG00000028898	Trnau1ap	100	88.014	Mus_musculus
ENSVPAG00000006778	TRNAU1AP	100	88.356	MGP_PahariEiJ_G0028896	Trnau1ap	100	88.356	Mus_pahari
ENSVPAG00000006778	TRNAU1AP	100	87.671	MGP_SPRETEiJ_G0027544	Trnau1ap	100	87.671	Mus_spretus
ENSVPAG00000006778	TRNAU1AP	100	88.356	ENSMPUG00000015511	TRNAU1AP	100	88.356	Mustela_putorius_furo
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSMLUG00000012586	TRNAU1AP	100	88.699	Myotis_lucifugus
ENSVPAG00000006778	TRNAU1AP	100	86.644	ENSNGAG00000015881	Trnau1ap	100	86.644	Nannospalax_galili
ENSVPAG00000006778	TRNAU1AP	82	57.258	ENSNBRG00000001758	trnau1apa	83	57.258	Neolamprologus_brichardi
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSNLEG00000009822	TRNAU1AP	100	89.041	Nomascus_leucogenys
ENSVPAG00000006778	TRNAU1AP	84	93.878	ENSMEUG00000006117	TRNAU1AP	88	93.878	Notamacropus_eugenii
ENSVPAG00000006778	TRNAU1AP	71	98.182	ENSOPRG00000007084	-	69	98.182	Ochotona_princeps
ENSVPAG00000006778	TRNAU1AP	100	88.014	ENSODEG00000002970	TRNAU1AP	100	88.014	Octodon_degus
ENSVPAG00000006778	TRNAU1AP	67	58.937	ENSONIG00000004715	trnau1apa	81	59.223	Oreochromis_niloticus
ENSVPAG00000006778	TRNAU1AP	98	64.236	ENSOANG00000005325	-	98	64.236	Ornithorhynchus_anatinus
ENSVPAG00000006778	TRNAU1AP	71	80.583	ENSOCUG00000006834	-	82	78.155	Oryctolagus_cuniculus
ENSVPAG00000006778	TRNAU1AP	100	86.986	ENSOCUG00000011704	-	100	86.986	Oryctolagus_cuniculus
ENSVPAG00000006778	TRNAU1AP	100	72.789	ENSOCUG00000002353	-	100	72.789	Oryctolagus_cuniculus
ENSVPAG00000006778	TRNAU1AP	98	51.020	ENSORLG00000010428	trnau1apa	96	49.342	Oryzias_latipes
ENSVPAG00000006778	TRNAU1AP	98	50.492	ENSORLG00020000926	trnau1ap	96	49.342	Oryzias_latipes_hni
ENSVPAG00000006778	TRNAU1AP	98	50.492	ENSORLG00015009858	trnau1ap	96	49.342	Oryzias_latipes_hsok
ENSVPAG00000006778	TRNAU1AP	98	51.475	ENSOMEG00000007873	trnau1apa	96	48.684	Oryzias_melastigma
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSOGAG00000002274	TRNAU1AP	100	88.699	Otolemur_garnettii
ENSVPAG00000006778	TRNAU1AP	100	88.356	ENSOARG00000002843	TRNAU1AP	100	88.356	Ovis_aries
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSPPAG00000033927	TRNAU1AP	100	89.041	Pan_paniscus
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSPPRG00000004416	TRNAU1AP	100	89.041	Panthera_pardus
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSPTIG00000016677	TRNAU1AP	100	89.041	Panthera_tigris_altaica
ENSVPAG00000006778	TRNAU1AP	84	81.452	ENSPTRG00000000434	-	88	80.242	Pan_troglodytes
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSPANG00000016019	TRNAU1AP	100	88.699	Papio_anubis
ENSVPAG00000006778	TRNAU1AP	95	49.057	ENSPKIG00000022205	-	94	49.057	Paramormyrops_kingsleyae
ENSVPAG00000006778	TRNAU1AP	96	52.203	ENSPKIG00000015511	trnau1apa	93	50.508	Paramormyrops_kingsleyae
ENSVPAG00000006778	TRNAU1AP	84	95.918	ENSPSIG00000006864	TRNAU1AP	89	95.918	Pelodiscus_sinensis
ENSVPAG00000006778	TRNAU1AP	80	60.426	ENSPMGG00000023893	trnau1apa	78	59.402	Periophthalmus_magnuspinnatus
ENSVPAG00000006778	TRNAU1AP	100	88.014	ENSPEMG00000007877	Trnau1ap	100	88.014	Peromyscus_maniculatus_bairdii
ENSVPAG00000006778	TRNAU1AP	78	53.509	ENSPMAG00000005934	trnau1apa	81	59.890	Petromyzon_marinus
ENSVPAG00000006778	TRNAU1AP	96	49.333	ENSPFOG00000008100	trnau1apa	94	50.000	Poecilia_formosa
ENSVPAG00000006778	TRNAU1AP	79	55.918	ENSPLAG00000010236	trnau1apa	82	56.735	Poecilia_latipinna
ENSVPAG00000006778	TRNAU1AP	79	58.009	ENSPMEG00000016387	trnau1apa	77	56.735	Poecilia_mexicana
ENSVPAG00000006778	TRNAU1AP	66	66.667	ENSPREG00000019821	trnau1apa	69	70.455	Poecilia_reticulata
ENSVPAG00000006778	TRNAU1AP	84	86.235	ENSPPYG00000001639	-	96	86.235	Pongo_abelii
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSPCOG00000027712	-	100	99.435	Propithecus_coquereli
ENSVPAG00000006778	TRNAU1AP	98	72.028	ENSPCOG00000023470	-	100	72.028	Propithecus_coquereli
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSPVAG00000017214	TRNAU1AP	100	89.041	Pteropus_vampyrus
ENSVPAG00000006778	TRNAU1AP	99	51.961	ENSPNYG00000010130	trnau1apa	98	52.769	Pundamilia_nyererei
ENSVPAG00000006778	TRNAU1AP	80	54.132	ENSPNAG00000024905	trnau1apa	77	53.165	Pygocentrus_nattereri
ENSVPAG00000006778	TRNAU1AP	95	79.348	ENSRNOG00000055344	Trnau1ap	92	79.348	Rattus_norvegicus
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSRBIG00000029083	TRNAU1AP	100	89.041	Rhinopithecus_bieti
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSRROG00000029128	TRNAU1AP	100	89.041	Rhinopithecus_roxellana
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSSBOG00000021299	TRNAU1AP	100	89.041	Saimiri_boliviensis_boliviensis
ENSVPAG00000006778	TRNAU1AP	100	84.247	ENSSHAG00000008108	TRNAU1AP	100	84.247	Sarcophilus_harrisii
ENSVPAG00000006778	TRNAU1AP	99	49.839	ENSSMAG00000020851	trnau1apa	98	51.125	Scophthalmus_maximus
ENSVPAG00000006778	TRNAU1AP	97	51.307	ENSSDUG00000011734	trnau1apa	94	50.000	Seriola_dumerili
ENSVPAG00000006778	TRNAU1AP	97	39.024	ENSSLDG00000012101	trnau1apa	92	42.955	Seriola_lalandi_dorsalis
ENSVPAG00000006778	TRNAU1AP	84	99.177	ENSSARG00000007536	TRNAU1AP	87	99.177	Sorex_araneus
ENSVPAG00000006778	TRNAU1AP	60	82.386	ENSSPUG00000010415	-	100	82.386	Sphenodon_punctatus
ENSVPAG00000006778	TRNAU1AP	99	76.976	ENSSPUG00000010400	-	100	76.976	Sphenodon_punctatus
ENSVPAG00000006778	TRNAU1AP	99	50.784	ENSSPAG00000005029	trnau1apa	98	50.784	Stegastes_partitus
ENSVPAG00000006778	TRNAU1AP	100	89.041	ENSSSCG00000030284	TRNAU1AP	100	100.000	Sus_scrofa
ENSVPAG00000006778	TRNAU1AP	84	94.694	ENSTGUG00000000735	-	88	94.694	Taeniopygia_guttata
ENSVPAG00000006778	TRNAU1AP	67	53.061	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSVPAG00000006778	TRNAU1AP	99	51.438	ENSTRUG00000003352	trnau1apa	98	50.799	Takifugu_rubripes
ENSVPAG00000006778	TRNAU1AP	99	49.841	ENSTNIG00000006129	trnau1apa	98	49.841	Tetraodon_nigroviridis
ENSVPAG00000006778	TRNAU1AP	84	88.163	ENSTBEG00000008049	-	100	88.163	Tupaia_belangeri
ENSVPAG00000006778	TRNAU1AP	100	88.699	ENSTTRG00000001854	TRNAU1AP	100	88.699	Tursiops_truncatus
ENSVPAG00000006778	TRNAU1AP	84	99.592	ENSUAMG00000008789	TRNAU1AP	89	99.592	Ursus_americanus
ENSVPAG00000006778	TRNAU1AP	100	88.356	ENSUMAG00000011068	TRNAU1AP	100	98.870	Ursus_maritimus
ENSVPAG00000006778	TRNAU1AP	99	87.197	ENSVVUG00000012518	TRNAU1AP	93	87.197	Vulpes_vulpes
ENSVPAG00000006778	TRNAU1AP	96	48.333	ENSXMAG00000017361	trnau1apa	94	50.000	Xiphophorus_maculatus