EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000006825 (Gene tree)
Gene ID: -
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 199437 bases
Position: chrGeneScaffold_254:36965-236401
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000006341	S1	PF00575.23	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006825	SRBD1-201	2718	-	ENSVPAP00000006341	905 (aa)	-	UPI00018BE275

Gene Model

Click here to download ENSVPAG00000006825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006825	SRBD1	100	91.290	ENSG00000068784	SRBD1	91	91.290	Homo_sapiens
ENSVPAG00000006825	SRBD1	92	56.907	ENSAPOG00000005103	si:ch211-117n7.8	83	57.497	Acanthochromis_polyacanthus
ENSVPAG00000006825	SRBD1	100	93.164	ENSAMEG00000005993	SRBD1	91	93.164	Ailuropoda_melanoleuca
ENSVPAG00000006825	SRBD1	91	57.075	ENSACIG00000009875	si:ch211-117n7.8	86	56.895	Amphilophus_citrinellus
ENSVPAG00000006825	SRBD1	92	56.776	ENSAOCG00000024718	si:ch211-117n7.8	85	57.410	Amphiprion_ocellaris
ENSVPAG00000006825	SRBD1	92	57.643	ENSAPEG00000002645	si:ch211-117n7.8	88	57.643	Amphiprion_percula
ENSVPAG00000006825	SRBD1	92	57.327	ENSATEG00000010844	si:ch211-117n7.8	84	57.327	Anabas_testudineus
ENSVPAG00000006825	SRBD1	93	79.318	ENSAPLG00000006313	SRBD1	85	79.318	Anas_platyrhynchos
ENSVPAG00000006825	SRBD1	100	91.400	ENSANAG00000025573	SRBD1	91	91.400	Aotus_nancymaae
ENSVPAG00000006825	SRBD1	93	55.749	ENSACLG00000024219	si:ch211-117n7.8	83	56.461	Astatotilapia_calliptera
ENSVPAG00000006825	SRBD1	93	60.492	ENSAMXG00000004294	SRBD1	84	60.727	Astyanax_mexicanus
ENSVPAG00000006825	SRBD1	99	93.577	ENSBTAG00000007508	SRBD1	88	93.577	Bos_taurus
ENSVPAG00000006825	SRBD1	100	90.728	ENSCJAG00000000727	SRBD1	91	90.728	Callithrix_jacchus
ENSVPAG00000006825	SRBD1	100	92.189	ENSCAFG00000002554	SRBD1	91	92.189	Canis_familiaris
ENSVPAG00000006825	SRBD1	100	88.987	ENSCAFG00020026284	SRBD1	99	91.521	Canis_lupus_dingo
ENSVPAG00000006825	SRBD1	99	94.131	ENSCHIG00000016535	SRBD1	89	94.131	Capra_hircus
ENSVPAG00000006825	SRBD1	100	93.297	ENSTSYG00000012797	SRBD1	91	93.297	Carlito_syrichta
ENSVPAG00000006825	SRBD1	99	89.922	ENSCPOG00000004773	SRBD1	91	89.922	Cavia_porcellus
ENSVPAG00000006825	SRBD1	100	91.731	ENSCCAG00000025589	SRBD1	91	91.731	Cebus_capucinus
ENSVPAG00000006825	SRBD1	100	92.282	ENSCATG00000039530	SRBD1	91	92.282	Cercocebus_atys
ENSVPAG00000006825	SRBD1	99	91.796	ENSCLAG00000008623	SRBD1	90	91.796	Chinchilla_lanigera
ENSVPAG00000006825	SRBD1	100	92.503	ENSCSAG00000013350	SRBD1	91	92.503	Chlorocebus_sabaeus
ENSVPAG00000006825	SRBD1	92	77.601	ENSCHOG00000003805	SRBD1	84	77.601	Choloepus_hoffmanni
ENSVPAG00000006825	SRBD1	99	77.704	ENSCPBG00000005677	SRBD1	91	77.704	Chrysemys_picta_bellii
ENSVPAG00000006825	SRBD1	86	42.875	ENSCING00000005950	-	99	42.875	Ciona_intestinalis
ENSVPAG00000006825	SRBD1	87	42.821	ENSCSAVG00000000861	-	99	42.821	Ciona_savignyi
ENSVPAG00000006825	SRBD1	100	91.841	ENSCANG00000016307	SRBD1	91	91.841	Colobus_angolensis_palliatus
ENSVPAG00000006825	SRBD1	99	87.265	ENSCGRG00001000513	Srbd1	91	87.265	Cricetulus_griseus_chok1gshd
ENSVPAG00000006825	SRBD1	99	87.265	ENSCGRG00000002283	Srbd1	91	87.265	Cricetulus_griseus_crigri
ENSVPAG00000006825	SRBD1	92	56.315	ENSCSEG00000000856	si:ch211-117n7.8	85	56.431	Cynoglossus_semilaevis
ENSVPAG00000006825	SRBD1	92	56.690	ENSCVAG00000020212	si:ch211-117n7.8	98	53.617	Cyprinodon_variegatus
ENSVPAG00000006825	SRBD1	100	92.645	ENSDNOG00000018686	SRBD1	91	92.645	Dasypus_novemcinctus
ENSVPAG00000006825	SRBD1	100	87.528	ENSDORG00000010468	Srbd1	91	87.528	Dipodomys_ordii
ENSVPAG00000006825	SRBD1	99	34.126	FBgn0051156	CG31156	96	34.333	Drosophila_melanogaster
ENSVPAG00000006825	SRBD1	91	83.036	ENSETEG00000000739	SRBD1	85	83.036	Echinops_telfairi
ENSVPAG00000006825	SRBD1	80	48.980	ENSEBUG00000008902	si:ch211-117n7.8	96	48.980	Eptatretus_burgeri
ENSVPAG00000006825	SRBD1	100	90.749	ENSEASG00005003132	SRBD1	97	97.452	Equus_asinus_asinus
ENSVPAG00000006825	SRBD1	100	94.493	ENSECAG00000013865	SRBD1	90	94.493	Equus_caballus
ENSVPAG00000006825	SRBD1	93	59.415	ENSELUG00000012592	si:ch211-117n7.8	82	59.415	Esox_lucius
ENSVPAG00000006825	SRBD1	100	93.722	ENSFCAG00000005101	SRBD1	91	93.722	Felis_catus
ENSVPAG00000006825	SRBD1	93	76.686	ENSFALG00000012966	SRBD1	86	76.686	Ficedula_albicollis
ENSVPAG00000006825	SRBD1	100	88.852	ENSFDAG00000016670	SRBD1	92	88.852	Fukomys_damarensis
ENSVPAG00000006825	SRBD1	92	57.783	ENSFHEG00000019480	si:ch211-117n7.8	82	57.783	Fundulus_heteroclitus
ENSVPAG00000006825	SRBD1	55	52.027	ENSGMOG00000018010	-	100	52.027	Gadus_morhua
ENSVPAG00000006825	SRBD1	93	78.673	ENSGALG00000009990	SRBD1	86	78.673	Gallus_gallus
ENSVPAG00000006825	SRBD1	92	56.486	ENSGAFG00000019664	si:ch211-117n7.8	84	56.486	Gambusia_affinis
ENSVPAG00000006825	SRBD1	69	60.320	ENSGACG00000010794	si:ch211-117n7.8	100	60.480	Gasterosteus_aculeatus
ENSVPAG00000006825	SRBD1	92	81.198	ENSGAGG00000006166	SRBD1	99	81.198	Gopherus_agassizii
ENSVPAG00000006825	SRBD1	100	91.731	ENSGGOG00000005910	SRBD1	94	91.731	Gorilla_gorilla
ENSVPAG00000006825	SRBD1	99	47.619	ENSHBUG00000013207	si:ch211-117n7.8	91	48.280	Haplochromis_burtoni
ENSVPAG00000006825	SRBD1	99	90.687	ENSHGLG00000018153	-	91	90.687	Heterocephalus_glaber_female
ENSVPAG00000006825	SRBD1	99	90.466	ENSHGLG00100015183	-	91	90.466	Heterocephalus_glaber_male
ENSVPAG00000006825	SRBD1	97	59.368	ENSIPUG00000009661	srbd1	88	59.368	Ictalurus_punctatus
ENSVPAG00000006825	SRBD1	100	92.723	ENSSTOG00000005898	SRBD1	91	92.723	Ictidomys_tridecemlineatus
ENSVPAG00000006825	SRBD1	100	82.288	ENSJJAG00000022244	Srbd1	91	82.288	Jaculus_jaculus
ENSVPAG00000006825	SRBD1	92	55.723	ENSKMAG00000003473	si:ch211-117n7.8	84	55.723	Kryptolebias_marmoratus
ENSVPAG00000006825	SRBD1	92	56.553	ENSLBEG00000027518	si:ch211-117n7.8	82	56.553	Labrus_bergylta
ENSVPAG00000006825	SRBD1	93	70.888	ENSLACG00000009790	SRBD1	99	70.888	Latimeria_chalumnae
ENSVPAG00000006825	SRBD1	93	63.850	ENSLOCG00000016360	si:ch211-117n7.8	85	63.850	Lepisosteus_oculatus
ENSVPAG00000006825	SRBD1	100	92.613	ENSMFAG00000042026	SRBD1	91	92.613	Macaca_fascicularis
ENSVPAG00000006825	SRBD1	100	92.384	ENSMMUG00000003490	SRBD1	91	92.384	Macaca_mulatta
ENSVPAG00000006825	SRBD1	100	89.636	ENSMNEG00000034701	SRBD1	91	89.636	Macaca_nemestrina
ENSVPAG00000006825	SRBD1	100	92.503	ENSMLEG00000000745	SRBD1	91	92.503	Mandrillus_leucophaeus
ENSVPAG00000006825	SRBD1	91	55.967	ENSMAMG00000021921	si:ch211-117n7.8	84	55.647	Mastacembelus_armatus
ENSVPAG00000006825	SRBD1	93	55.749	ENSMZEG00005027369	si:ch211-117n7.8	83	56.461	Maylandia_zebra
ENSVPAG00000006825	SRBD1	88	76.065	ENSMGAG00000010273	SRBD1	100	76.065	Meleagris_gallopavo
ENSVPAG00000006825	SRBD1	87	86.962	ENSMAUG00000013916	Srbd1	99	84.479	Mesocricetus_auratus
ENSVPAG00000006825	SRBD1	100	93.943	ENSMICG00000007835	SRBD1	91	93.943	Microcebus_murinus
ENSVPAG00000006825	SRBD1	99	85.936	ENSMOCG00000018716	Srbd1	91	85.936	Microtus_ochrogaster
ENSVPAG00000006825	SRBD1	92	55.425	ENSMMOG00000007507	si:ch211-117n7.8	87	55.425	Mola_mola
ENSVPAG00000006825	SRBD1	97	53.568	ENSMALG00000001562	si:ch211-117n7.8	89	53.779	Monopterus_albus
ENSVPAG00000006825	SRBD1	99	84.684	MGP_CAROLIEiJ_G0021934	Srbd1	99	83.067	Mus_caroli
ENSVPAG00000006825	SRBD1	99	84.462	ENSMUSG00000024135	Srbd1	99	82.653	Mus_musculus
ENSVPAG00000006825	SRBD1	99	83.352	MGP_PahariEiJ_G0020924	Srbd1	90	83.352	Mus_pahari
ENSVPAG00000006825	SRBD1	99	84.684	MGP_SPRETEiJ_G0022850	Srbd1	90	84.684	Mus_spretus
ENSVPAG00000006825	SRBD1	100	90.077	ENSMLUG00000007039	SRBD1	91	90.077	Myotis_lucifugus
ENSVPAG00000006825	SRBD1	99	84.946	ENSNGAG00000011893	Srbd1	91	84.946	Nannospalax_galili
ENSVPAG00000006825	SRBD1	92	55.886	ENSNBRG00000012873	si:ch211-117n7.8	85	56.005	Neolamprologus_brichardi
ENSVPAG00000006825	SRBD1	100	91.621	ENSNLEG00000016877	SRBD1	91	91.621	Nomascus_leucogenys
ENSVPAG00000006825	SRBD1	99	89.135	ENSODEG00000012095	SRBD1	91	89.135	Octodon_degus
ENSVPAG00000006825	SRBD1	92	57.452	ENSONIG00000000945	si:ch211-117n7.8	99	57.572	Oreochromis_niloticus
ENSVPAG00000006825	SRBD1	100	93.172	ENSOCUG00000015385	SRBD1	91	93.172	Oryctolagus_cuniculus
ENSVPAG00000006825	SRBD1	91	53.710	ENSORLG00000004427	si:ch211-117n7.8	81	53.710	Oryzias_latipes
ENSVPAG00000006825	SRBD1	91	56.235	ENSORLG00020012792	si:ch211-117n7.8	82	56.588	Oryzias_latipes_hni
ENSVPAG00000006825	SRBD1	91	56.537	ENSORLG00015018598	si:ch211-117n7.8	82	56.537	Oryzias_latipes_hsok
ENSVPAG00000006825	SRBD1	91	55.503	ENSOMEG00000012229	si:ch211-117n7.8	82	55.503	Oryzias_melastigma
ENSVPAG00000006825	SRBD1	100	86.233	ENSOGAG00000001076	SRBD1	91	86.233	Otolemur_garnettii
ENSVPAG00000006825	SRBD1	99	88.913	ENSOARG00000005958	SRBD1	91	88.913	Ovis_aries
ENSVPAG00000006825	SRBD1	100	91.621	ENSPPAG00000038442	SRBD1	91	91.621	Pan_paniscus
ENSVPAG00000006825	SRBD1	100	93.826	ENSPPRG00000003449	SRBD1	91	93.826	Panthera_pardus
ENSVPAG00000006825	SRBD1	100	93.826	ENSPTIG00000012495	SRBD1	91	93.826	Panthera_tigris_altaica
ENSVPAG00000006825	SRBD1	100	91.621	ENSPTRG00000011889	SRBD1	91	91.621	Pan_troglodytes
ENSVPAG00000006825	SRBD1	100	92.393	ENSPANG00000008063	SRBD1	91	92.393	Papio_anubis
ENSVPAG00000006825	SRBD1	92	60.216	ENSPKIG00000021973	si:ch211-117n7.8	85	60.216	Paramormyrops_kingsleyae
ENSVPAG00000006825	SRBD1	98	77.329	ENSPSIG00000008992	SRBD1	90	77.329	Pelodiscus_sinensis
ENSVPAG00000006825	SRBD1	96	52.993	ENSPMGG00000013348	si:ch211-117n7.8	91	53.437	Periophthalmus_magnuspinnatus
ENSVPAG00000006825	SRBD1	99	84.707	ENSPEMG00000020684	Srbd1	90	84.707	Peromyscus_maniculatus_bairdii
ENSVPAG00000006825	SRBD1	92	57.075	ENSPFOG00000010650	si:ch211-117n7.8	83	57.075	Poecilia_formosa
ENSVPAG00000006825	SRBD1	92	57.075	ENSPLAG00000002141	si:ch211-117n7.8	83	57.075	Poecilia_latipinna
ENSVPAG00000006825	SRBD1	92	57.193	ENSPMEG00000018537	si:ch211-117n7.8	83	57.193	Poecilia_mexicana
ENSVPAG00000006825	SRBD1	92	56.722	ENSPREG00000003258	si:ch211-117n7.8	85	56.722	Poecilia_reticulata
ENSVPAG00000006825	SRBD1	100	83.454	ENSPPYG00000012444	SRBD1	91	83.454	Pongo_abelii
ENSVPAG00000006825	SRBD1	83	82.626	ENSPCAG00000005629	SRBD1	80	82.626	Procavia_capensis
ENSVPAG00000006825	SRBD1	100	80.022	ENSPCOG00000017669	SRBD1	91	80.022	Propithecus_coquereli
ENSVPAG00000006825	SRBD1	99	82.483	ENSPVAG00000001782	SRBD1	91	82.483	Pteropus_vampyrus
ENSVPAG00000006825	SRBD1	93	53.239	ENSPNYG00000000508	si:ch211-117n7.8	86	53.955	Pundamilia_nyererei
ENSVPAG00000006825	SRBD1	95	60.523	ENSPNAG00000013492	SRBD1	88	60.523	Pygocentrus_nattereri
ENSVPAG00000006825	SRBD1	99	83.592	ENSRNOG00000014720	Srbd1	90	84.368	Rattus_norvegicus
ENSVPAG00000006825	SRBD1	100	91.951	ENSRBIG00000033486	SRBD1	91	91.951	Rhinopithecus_bieti
ENSVPAG00000006825	SRBD1	100	91.951	ENSRROG00000041599	SRBD1	91	91.951	Rhinopithecus_roxellana
ENSVPAG00000006825	SRBD1	100	91.180	ENSSBOG00000024982	SRBD1	91	91.180	Saimiri_boliviensis_boliviensis
ENSVPAG00000006825	SRBD1	92	59.668	ENSSFOG00015001128	si:ch211-117n7.8	90	59.668	Scleropages_formosus
ENSVPAG00000006825	SRBD1	92	56.808	ENSSMAG00000018256	si:ch211-117n7.8	82	56.874	Scophthalmus_maximus
ENSVPAG00000006825	SRBD1	93	55.787	ENSSLDG00000023189	si:ch211-117n7.8	84	55.787	Seriola_lalandi_dorsalis
ENSVPAG00000006825	SRBD1	100	81.236	ENSSARG00000009740	SRBD1	92	81.236	Sorex_araneus
ENSVPAG00000006825	SRBD1	93	78.867	ENSSPUG00000010475	SRBD1	98	76.271	Sphenodon_punctatus
ENSVPAG00000006825	SRBD1	92	54.345	ENSSPAG00000008092	-	85	54.925	Stegastes_partitus
ENSVPAG00000006825	SRBD1	100	95.044	ENSSSCG00000008445	SRBD1	90	95.044	Sus_scrofa
ENSVPAG00000006825	SRBD1	92	77.831	ENSTGUG00000003878	SRBD1	100	77.831	Taeniopygia_guttata
ENSVPAG00000006825	SRBD1	97	54.626	ENSTRUG00000007080	si:ch211-117n7.8	98	54.956	Takifugu_rubripes
ENSVPAG00000006825	SRBD1	98	52.574	ENSTNIG00000007464	si:ch211-117n7.8	89	52.574	Tetraodon_nigroviridis
ENSVPAG00000006825	SRBD1	74	98.947	ENSTBEG00000004556	SRBD1	67	98.947	Tupaia_belangeri
ENSVPAG00000006825	SRBD1	93	95.392	ENSTTRG00000011871	SRBD1	85	95.392	Tursiops_truncatus
ENSVPAG00000006825	SRBD1	100	92.952	ENSUAMG00000008126	SRBD1	97	95.290	Ursus_americanus
ENSVPAG00000006825	SRBD1	100	92.952	ENSUMAG00000012902	SRBD1	90	92.952	Ursus_maritimus
ENSVPAG00000006825	SRBD1	100	92.511	ENSVVUG00000005389	SRBD1	90	96.203	Vulpes_vulpes
ENSVPAG00000006825	SRBD1	93	56.229	ENSXETG00000002760	srbd1	86	56.229	Xenopus_tropicalis
ENSVPAG00000006825	SRBD1	92	56.604	ENSXMAG00000016861	si:ch211-117n7.8	83	56.604	Xiphophorus_maculatus