EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000006960 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 5522 bases
Position: chrGeneScaffold_2398:172948-178469
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000006470	RRM_1	PF00076.22	1.2e-30	1	2
ENSVPAP00000006470	RRM_1	PF00076.22	1.2e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000006960	-	1986	-	ENSVPAP00000006470	662 (aa)	-	UPI00018BD282

Gene Model

Click here to download ENSVPAG00000006960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000006960's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000006960	-	67	90.315	ENSG00000116560	SFPQ	97	81.481	Homo_sapiens
ENSVPAG00000006960	-	60	89.620	ENSAMEG00000000815	SFPQ	90	89.620	Ailuropoda_melanoleuca
ENSVPAG00000006960	-	52	72.701	ENSACIG00000000905	sfpq	51	81.356	Amphilophus_citrinellus
ENSVPAG00000006960	-	55	79.670	ENSANAG00000027438	-	60	73.990	Aotus_nancymaae
ENSVPAG00000006960	-	67	90.315	ENSBTAG00000016328	SFPQ	66	90.315	Bos_taurus
ENSVPAG00000006960	-	67	90.090	ENSCJAG00000001431	SFPQ	63	90.090	Callithrix_jacchus
ENSVPAG00000006960	-	66	80.909	ENSCAFG00000018271	-	66	79.458	Canis_familiaris
ENSVPAG00000006960	-	67	90.090	ENSCAFG00000003595	-	67	90.090	Canis_familiaris
ENSVPAG00000006960	-	60	84.051	ENSCAFG00000017608	-	58	84.091	Canis_familiaris
ENSVPAG00000006960	-	66	80.726	ENSCAFG00020004881	-	66	78.781	Canis_lupus_dingo
ENSVPAG00000006960	-	67	90.315	ENSCHIG00000023097	SFPQ	66	90.315	Capra_hircus
ENSVPAG00000006960	-	67	89.865	ENSCCAG00000029361	-	63	89.865	Cebus_capucinus
ENSVPAG00000006960	-	66	63.677	ENSCATG00000032664	-	63	64.444	Cercocebus_atys
ENSVPAG00000006960	-	65	86.916	ENSCATG00000036179	-	63	86.916	Cercocebus_atys
ENSVPAG00000006960	-	67	90.315	ENSCSAG00000001082	SFPQ	63	90.315	Chlorocebus_sabaeus
ENSVPAG00000006960	-	60	81.931	ENSCPBG00000018674	SFPQ	61	83.120	Chrysemys_picta_bellii
ENSVPAG00000006960	-	67	88.964	ENSCGRG00001011698	Sfpq	63	88.964	Cricetulus_griseus_chok1gshd
ENSVPAG00000006960	-	58	89.119	ENSCGRG00000010128	Sfpq	85	89.119	Cricetulus_griseus_crigri
ENSVPAG00000006960	-	59	67.347	ENSDARG00000011564	sfpq	100	83.478	Danio_rerio
ENSVPAG00000006960	-	67	89.865	ENSDNOG00000049454	SFPQ	63	89.865	Dasypus_novemcinctus
ENSVPAG00000006960	-	67	90.315	ENSDORG00000008109	Sfpq	63	90.315	Dipodomys_ordii
ENSVPAG00000006960	-	67	90.315	ENSEASG00005012012	SFPQ	66	90.315	Equus_asinus_asinus
ENSVPAG00000006960	-	67	90.315	ENSECAG00000000642	SFPQ	66	90.315	Equus_caballus
ENSVPAG00000006960	-	67	90.315	ENSFCAG00000042862	SFPQ	63	90.315	Felis_catus
ENSVPAG00000006960	-	55	71.662	ENSGMOG00000011950	SFPQ	51	83.681	Gadus_morhua
ENSVPAG00000006960	-	59	83.969	ENSGALG00000002514	SFPQ	60	84.755	Gallus_gallus
ENSVPAG00000006960	-	58	64.156	ENSGAFG00000014571	sfpq	50	78.746	Gambusia_affinis
ENSVPAG00000006960	-	65	63.677	ENSGACG00000002034	sfpq	53	80.769	Gasterosteus_aculeatus
ENSVPAG00000006960	-	59	89.175	ENSGGOG00000026354	SFPQ	87	86.928	Gorilla_gorilla
ENSVPAG00000006960	-	67	89.485	ENSHGLG00000012001	SFPQ	64	89.485	Heterocephalus_glaber_female
ENSVPAG00000006960	-	60	67.839	ENSHCOG00000008612	sfpq	52	78.819	Hippocampus_comes
ENSVPAG00000006960	-	56	69.067	ENSIPUG00000013076	SFPQ	53	81.633	Ictalurus_punctatus
ENSVPAG00000006960	-	67	89.865	ENSJJAG00000015633	Sfpq	63	89.865	Jaculus_jaculus
ENSVPAG00000006960	-	61	70.762	ENSLACG00000014728	SFPQ	67	71.948	Latimeria_chalumnae
ENSVPAG00000006960	-	62	68.949	ENSLOCG00000001067	sfpq	51	87.153	Lepisosteus_oculatus
ENSVPAG00000006960	-	67	89.865	ENSLAFG00000015951	SFPQ	68	86.937	Loxodonta_africana
ENSVPAG00000006960	-	67	90.090	ENSMFAG00000000797	SFPQ	63	90.090	Macaca_fascicularis
ENSVPAG00000006960	-	67	90.090	ENSMMUG00000019154	SFPQ	63	90.090	Macaca_mulatta
ENSVPAG00000006960	-	67	90.315	ENSMNEG00000038895	SFPQ	63	90.315	Macaca_nemestrina
ENSVPAG00000006960	-	51	83.284	ENSMGAG00000004237	SFPQ	86	83.284	Meleagris_gallopavo
ENSVPAG00000006960	-	67	88.964	ENSMAUG00000006402	Sfpq	63	88.964	Mesocricetus_auratus
ENSVPAG00000006960	-	67	90.315	ENSMICG00000027265	SFPQ	63	90.315	Microcebus_murinus
ENSVPAG00000006960	-	66	85.126	ENSMOCG00000019075	Sfpq	90	85.126	Microtus_ochrogaster
ENSVPAG00000006960	-	61	85.536	ENSMODG00000017937	SFPQ	67	83.073	Monodelphis_domestica
ENSVPAG00000006960	-	58	69.351	ENSMALG00000010381	sfpq	51	85.069	Monopterus_albus
ENSVPAG00000006960	-	67	88.964	MGP_CAROLIEiJ_G0026487	Sfpq	63	88.964	Mus_caroli
ENSVPAG00000006960	-	67	88.964	ENSMUSG00000028820	Sfpq	64	88.964	Mus_musculus
ENSVPAG00000006960	-	67	88.964	MGP_PahariEiJ_G0028818	Sfpq	64	88.964	Mus_pahari
ENSVPAG00000006960	-	67	88.964	MGP_SPRETEiJ_G0027466	Sfpq	64	88.964	Mus_spretus
ENSVPAG00000006960	-	61	86.667	ENSMLUG00000027090	SFPQ	90	86.667	Myotis_lucifugus
ENSVPAG00000006960	-	67	88.989	ENSNGAG00000000888	Sfpq	63	88.989	Nannospalax_galili
ENSVPAG00000006960	-	61	85.185	ENSMEUG00000014082	SFPQ	58	85.185	Notamacropus_eugenii
ENSVPAG00000006960	-	66	86.560	ENSOPRG00000013696	SFPQ	56	89.313	Ochotona_princeps
ENSVPAG00000006960	-	65	77.262	ENSODEG00000005485	SFPQ	69	100.000	Octodon_degus
ENSVPAG00000006960	-	60	89.594	ENSOCUG00000001877	SFPQ	78	89.594	Oryctolagus_cuniculus
ENSVPAG00000006960	-	67	90.090	ENSOGAG00000027710	SFPQ	84	90.090	Otolemur_garnettii
ENSVPAG00000006960	-	59	88.325	ENSOARG00000019439	SFPQ	60	88.325	Ovis_aries
ENSVPAG00000006960	-	63	90.215	ENSPPAG00000030078	SFPQ	59	90.215	Pan_paniscus
ENSVPAG00000006960	-	67	83.559	ENSPTRG00000000518	SFPQ	65	83.559	Pan_troglodytes
ENSVPAG00000006960	-	67	90.315	ENSPANG00000005380	SFPQ	66	90.315	Papio_anubis
ENSVPAG00000006960	-	58	84.456	ENSPSIG00000011494	SFPQ	90	84.456	Pelodiscus_sinensis
ENSVPAG00000006960	-	64	88.967	ENSPEMG00000009794	Sfpq	88	88.967	Peromyscus_maniculatus_bairdii
ENSVPAG00000006960	-	67	84.633	ENSPCIG00000000923	SFPQ	68	84.633	Phascolarctos_cinereus
ENSVPAG00000006960	-	67	90.315	ENSPPYG00000001560	SFPQ	63	90.315	Pongo_abelii
ENSVPAG00000006960	-	58	88.281	ENSPCAG00000006164	SFPQ	54	88.281	Procavia_capensis
ENSVPAG00000006960	-	67	90.315	ENSPCOG00000027127	SFPQ	63	90.315	Propithecus_coquereli
ENSVPAG00000006960	-	67	87.613	ENSPVAG00000001865	SFPQ	63	87.613	Pteropus_vampyrus
ENSVPAG00000006960	-	59	67.920	ENSPNAG00000002128	sfpq	51	82.943	Pygocentrus_nattereri
ENSVPAG00000006960	-	67	88.964	ENSRNOG00000058461	Sfpq	64	88.964	Rattus_norvegicus
ENSVPAG00000006960	-	60	79.747	ENSRBIG00000035286	SFPQ	87	86.928	Rhinopithecus_bieti
ENSVPAG00000006960	-	66	90.389	ENSRROG00000040992	SFPQ	87	86.928	Rhinopithecus_roxellana
ENSVPAG00000006960	-	58	85.233	ENSSHAG00000016107	-	83	85.233	Sarcophilus_harrisii
ENSVPAG00000006960	-	58	72.208	ENSSFOG00015009289	sfpq	54	85.235	Scleropages_formosus
ENSVPAG00000006960	-	67	90.090	ENSSSCG00000035690	SFPQ	67	90.090	Sus_scrofa
ENSVPAG00000006960	-	58	84.715	ENSTGUG00000001722	SFPQ	90	84.715	Taeniopygia_guttata
ENSVPAG00000006960	-	56	98.214	ENSTBEG00000006238	SFPQ	59	98.214	Tupaia_belangeri
ENSVPAG00000006960	-	52	97.983	ENSTTRG00000013930	SFPQ	55	100.000	Tursiops_truncatus
ENSVPAG00000006960	-	62	73.430	ENSXETG00000009682	sfpq	100	74.303	Xenopus_tropicalis