EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000007183 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 10844 bases
Position: chrGeneScaffold_3436:1660332-1671175
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000006682	RRM_1	PF00076.22	3.2e-15	1	1
ENSVPAP00000006682	RRM_3	PF08777.11	1.2e-31	1	1
ENSVPAP00000006682	La	PF05383.17	2.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000007183	SSB-201	1206	-	ENSVPAP00000006682	401 (aa)	-	UPI00018BEDF1

Gene Model

Click here to download ENSVPAG00000007183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000007183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000007183	SSB	100	93.627	ENSG00000138385	SSB	100	98.333	Homo_sapiens
ENSVPAG00000007183	SSB	98	56.281	ENSAPOG00000003448	ssb	100	56.716	Acanthochromis_polyacanthus
ENSVPAG00000007183	SSB	100	91.190	ENSAMEG00000010507	SSB	100	91.190	Ailuropoda_melanoleuca
ENSVPAG00000007183	SSB	93	59.358	ENSACIG00000001738	ssb	97	59.200	Amphilophus_citrinellus
ENSVPAG00000007183	SSB	98	56.533	ENSAOCG00000020398	ssb	100	57.214	Amphiprion_ocellaris
ENSVPAG00000007183	SSB	98	56.784	ENSAPEG00000020395	ssb	100	57.463	Amphiprion_percula
ENSVPAG00000007183	SSB	99	57.463	ENSATEG00000016884	ssb	100	57.960	Anabas_testudineus
ENSVPAG00000007183	SSB	100	70.283	ENSAPLG00000006109	SSB	100	71.765	Anas_platyrhynchos
ENSVPAG00000007183	SSB	100	67.317	ENSACAG00000017008	SSB	99	67.317	Anolis_carolinensis
ENSVPAG00000007183	SSB	100	84.198	ENSANAG00000027195	-	100	84.198	Aotus_nancymaae
ENSVPAG00000007183	SSB	99	54.839	ENSACLG00000010798	ssb	100	54.591	Astatotilapia_calliptera
ENSVPAG00000007183	SSB	98	54.412	ENSAMXG00000012606	ssb	100	55.448	Astyanax_mexicanus
ENSVPAG00000007183	SSB	100	95.050	ENSBTAG00000008716	SSB	100	95.050	Bos_taurus
ENSVPAG00000007183	SSB	74	34.768	WBGene00016653	C44E4.4	85	32.749	Caenorhabditis_elegans
ENSVPAG00000007183	SSB	100	93.827	ENSCJAG00000045073	SSB	100	93.827	Callithrix_jacchus
ENSVPAG00000007183	SSB	100	94.089	ENSCAFG00000012418	SSB	100	94.089	Canis_familiaris
ENSVPAG00000007183	SSB	100	94.089	ENSCAFG00020002900	SSB	100	94.089	Canis_lupus_dingo
ENSVPAG00000007183	SSB	100	88.642	ENSCHIG00000022196	-	100	88.642	Capra_hircus
ENSVPAG00000007183	SSB	100	94.815	ENSCHIG00000022624	-	100	94.815	Capra_hircus
ENSVPAG00000007183	SSB	100	94.321	ENSTSYG00000000097	SSB	100	94.321	Carlito_syrichta
ENSVPAG00000007183	SSB	100	95.062	ENSCPOG00000003338	SSB	100	95.062	Cavia_porcellus
ENSVPAG00000007183	SSB	100	93.827	ENSCCAG00000035147	SSB	100	93.827	Cebus_capucinus
ENSVPAG00000007183	SSB	100	73.333	ENSCATG00000036701	SSB	100	73.333	Cercocebus_atys
ENSVPAG00000007183	SSB	100	69.630	ENSCATG00000042909	-	100	69.630	Cercocebus_atys
ENSVPAG00000007183	SSB	100	94.568	ENSCLAG00000015617	-	100	94.568	Chinchilla_lanigera
ENSVPAG00000007183	SSB	100	93.827	ENSCSAG00000015200	SSB	89	93.827	Chlorocebus_sabaeus
ENSVPAG00000007183	SSB	98	84.887	ENSCSAG00000018390	-	100	84.887	Chlorocebus_sabaeus
ENSVPAG00000007183	SSB	100	94.321	ENSCHOG00000007763	SSB	100	94.321	Choloepus_hoffmanni
ENSVPAG00000007183	SSB	100	78.973	ENSCPBG00000006519	SSB	100	79.707	Chrysemys_picta_bellii
ENSVPAG00000007183	SSB	100	94.074	ENSCANG00000027695	SSB	100	94.074	Colobus_angolensis_palliatus
ENSVPAG00000007183	SSB	100	79.506	ENSCANG00000033240	-	100	79.506	Colobus_angolensis_palliatus
ENSVPAG00000007183	SSB	97	75.258	ENSCANG00000028838	-	92	75.258	Colobus_angolensis_palliatus
ENSVPAG00000007183	SSB	100	79.024	ENSCGRG00001024831	Ssb	100	80.244	Cricetulus_griseus_chok1gshd
ENSVPAG00000007183	SSB	100	79.024	ENSCGRG00000005387	Ssb	100	80.244	Cricetulus_griseus_crigri
ENSVPAG00000007183	SSB	98	57.179	ENSCSEG00000011599	ssb	99	57.935	Cynoglossus_semilaevis
ENSVPAG00000007183	SSB	99	57.072	ENSCVAG00000021558	ssb	100	57.568	Cyprinodon_variegatus
ENSVPAG00000007183	SSB	98	57.606	ENSDARG00000029252	ssb	99	57.606	Danio_rerio
ENSVPAG00000007183	SSB	100	94.074	ENSDNOG00000013450	SSB	100	94.074	Dasypus_novemcinctus
ENSVPAG00000007183	SSB	100	84.915	ENSDORG00000005543	Ssb	100	84.915	Dipodomys_ordii
ENSVPAG00000007183	SSB	85	33.908	FBgn0011638	La	86	34.930	Drosophila_melanogaster
ENSVPAG00000007183	SSB	50	94.030	ENSETEG00000004614	-	52	94.030	Echinops_telfairi
ENSVPAG00000007183	SSB	89	49.721	ENSEBUG00000001237	ssb	92	50.000	Eptatretus_burgeri
ENSVPAG00000007183	SSB	100	96.296	ENSEASG00005022835	SSB	100	96.296	Equus_asinus_asinus
ENSVPAG00000007183	SSB	100	96.543	ENSECAG00000018495	SSB	100	96.543	Equus_caballus
ENSVPAG00000007183	SSB	76	76.471	ENSEEUG00000008077	SSB	78	76.471	Erinaceus_europaeus
ENSVPAG00000007183	SSB	98	59.453	ENSELUG00000020929	ssb	100	59.951	Esox_lucius
ENSVPAG00000007183	SSB	100	94.581	ENSFCAG00000011601	SSB	100	94.581	Felis_catus
ENSVPAG00000007183	SSB	100	74.693	ENSFALG00000000930	SSB	100	74.693	Ficedula_albicollis
ENSVPAG00000007183	SSB	100	94.568	ENSFDAG00000000598	SSB	100	94.568	Fukomys_damarensis
ENSVPAG00000007183	SSB	73	55.518	ENSFHEG00000003268	ssb	95	55.882	Fundulus_heteroclitus
ENSVPAG00000007183	SSB	97	54.815	ENSGMOG00000002664	ssb	99	55.309	Gadus_morhua
ENSVPAG00000007183	SSB	100	74.755	ENSGALG00000009677	SSB	100	74.755	Gallus_gallus
ENSVPAG00000007183	SSB	99	56.158	ENSGAFG00000002749	ssb	100	56.404	Gambusia_affinis
ENSVPAG00000007183	SSB	99	54.390	ENSGACG00000005107	ssb	100	54.479	Gasterosteus_aculeatus
ENSVPAG00000007183	SSB	100	78.729	ENSGAGG00000007807	SSB	100	78.973	Gopherus_agassizii
ENSVPAG00000007183	SSB	62	89.333	ENSGGOG00000023471	-	100	89.333	Gorilla_gorilla
ENSVPAG00000007183	SSB	100	77.531	ENSGGOG00000024891	-	100	77.531	Gorilla_gorilla
ENSVPAG00000007183	SSB	99	54.591	ENSHBUG00000006584	ssb	100	54.342	Haplochromis_burtoni
ENSVPAG00000007183	SSB	100	87.781	ENSHGLG00000005832	-	100	87.781	Heterocephalus_glaber_female
ENSVPAG00000007183	SSB	100	93.204	ENSHGLG00000017580	-	100	93.204	Heterocephalus_glaber_female
ENSVPAG00000007183	SSB	100	86.700	ENSHGLG00000004478	-	100	86.700	Heterocephalus_glaber_female
ENSVPAG00000007183	SSB	100	93.204	ENSHGLG00100003084	-	100	93.204	Heterocephalus_glaber_male
ENSVPAG00000007183	SSB	100	82.793	ENSHGLG00100008767	-	100	82.793	Heterocephalus_glaber_male
ENSVPAG00000007183	SSB	98	55.190	ENSHCOG00000019011	ssb	99	55.443	Hippocampus_comes
ENSVPAG00000007183	SSB	97	57.711	ENSIPUG00000003681	SSB	99	58.168	Ictalurus_punctatus
ENSVPAG00000007183	SSB	100	94.568	ENSSTOG00000008416	SSB	100	94.568	Ictidomys_tridecemlineatus
ENSVPAG00000007183	SSB	100	80.142	ENSJJAG00000023158	-	100	80.142	Jaculus_jaculus
ENSVPAG00000007183	SSB	99	68.159	ENSJJAG00000016250	-	99	68.159	Jaculus_jaculus
ENSVPAG00000007183	SSB	99	55.854	ENSKMAG00000017317	ssb	100	56.341	Kryptolebias_marmoratus
ENSVPAG00000007183	SSB	98	53.960	ENSLBEG00000017345	ssb	100	54.902	Labrus_bergylta
ENSVPAG00000007183	SSB	99	66.339	ENSLACG00000014056	SSB	99	68.627	Latimeria_chalumnae
ENSVPAG00000007183	SSB	98	66.584	ENSLOCG00000007933	ssb	99	67.082	Lepisosteus_oculatus
ENSVPAG00000007183	SSB	100	86.019	ENSLAFG00000000867	-	100	87.915	Loxodonta_africana
ENSVPAG00000007183	SSB	100	78.765	ENSLAFG00000028909	-	100	78.765	Loxodonta_africana
ENSVPAG00000007183	SSB	75	69.536	ENSLAFG00000026721	-	99	69.536	Loxodonta_africana
ENSVPAG00000007183	SSB	89	81.513	ENSMFAG00000041478	-	100	81.513	Macaca_fascicularis
ENSVPAG00000007183	SSB	100	94.074	ENSMFAG00000039066	SSB	100	94.074	Macaca_fascicularis
ENSVPAG00000007183	SSB	100	94.074	ENSMMUG00000023051	SSB	100	94.074	Macaca_mulatta
ENSVPAG00000007183	SSB	100	79.259	ENSMMUG00000011724	-	97	79.259	Macaca_mulatta
ENSVPAG00000007183	SSB	99	65.509	ENSMMUG00000039889	-	100	65.757	Macaca_mulatta
ENSVPAG00000007183	SSB	100	81.220	ENSMNEG00000028321	SSB	85	98.261	Macaca_nemestrina
ENSVPAG00000007183	SSB	89	81.513	ENSMNEG00000034698	-	100	81.513	Macaca_nemestrina
ENSVPAG00000007183	SSB	100	66.420	ENSMLEG00000042644	-	100	66.420	Mandrillus_leucophaeus
ENSVPAG00000007183	SSB	100	94.074	ENSMLEG00000035717	SSB	100	94.074	Mandrillus_leucophaeus
ENSVPAG00000007183	SSB	99	58.663	ENSMAMG00000004800	ssb	100	59.158	Mastacembelus_armatus
ENSVPAG00000007183	SSB	99	54.839	ENSMZEG00005005749	ssb	100	54.591	Maylandia_zebra
ENSVPAG00000007183	SSB	100	74.755	ENSMGAG00000010328	SSB	99	77.073	Meleagris_gallopavo
ENSVPAG00000007183	SSB	98	86.146	ENSMICG00000033304	-	95	90.323	Microcebus_murinus
ENSVPAG00000007183	SSB	99	94.789	ENSMICG00000028252	-	99	94.789	Microcebus_murinus
ENSVPAG00000007183	SSB	85	81.132	ENSMODG00000007027	-	99	81.132	Monodelphis_domestica
ENSVPAG00000007183	SSB	100	77.913	ENSMODG00000008227	-	100	79.075	Monodelphis_domestica
ENSVPAG00000007183	SSB	100	67.160	ENSMODG00000019271	-	100	67.160	Monodelphis_domestica
ENSVPAG00000007183	SSB	91	58.856	ENSMALG00000008045	ssb	90	59.416	Monopterus_albus
ENSVPAG00000007183	SSB	100	77.197	MGP_CAROLIEiJ_G0023629	-	100	91.848	Mus_caroli
ENSVPAG00000007183	SSB	100	76.485	ENSMUSG00000068882	Ssb	100	91.848	Mus_musculus
ENSVPAG00000007183	SSB	100	76.485	MGP_PahariEiJ_G0025081	-	100	91.848	Mus_pahari
ENSVPAG00000007183	SSB	100	76.485	MGP_SPRETEiJ_G0024551	Ssb	100	91.848	Mus_spretus
ENSVPAG00000007183	SSB	100	95.556	ENSMPUG00000000785	SSB	100	95.556	Mustela_putorius_furo
ENSVPAG00000007183	SSB	100	89.286	ENSMLUG00000016316	SSB	100	89.286	Myotis_lucifugus
ENSVPAG00000007183	SSB	99	54.591	ENSNBRG00000012661	ssb	100	54.342	Neolamprologus_brichardi
ENSVPAG00000007183	SSB	100	68.966	ENSNLEG00000028754	-	100	68.966	Nomascus_leucogenys
ENSVPAG00000007183	SSB	100	94.321	ENSNLEG00000004958	SSB	100	94.321	Nomascus_leucogenys
ENSVPAG00000007183	SSB	62	88.710	ENSMEUG00000001650	-	100	88.710	Notamacropus_eugenii
ENSVPAG00000007183	SSB	71	73.448	ENSOPRG00000008475	-	100	73.448	Ochotona_princeps
ENSVPAG00000007183	SSB	93	88.624	ENSODEG00000004202	-	100	88.624	Octodon_degus
ENSVPAG00000007183	SSB	99	54.839	ENSONIG00000008776	ssb	100	54.591	Oreochromis_niloticus
ENSVPAG00000007183	SSB	100	83.210	ENSOANG00000008543	SSB	100	83.210	Ornithorhynchus_anatinus
ENSVPAG00000007183	SSB	100	94.074	ENSOCUG00000010396	SSB	100	94.074	Oryctolagus_cuniculus
ENSVPAG00000007183	SSB	99	58.416	ENSORLG00000017208	ssb	100	58.663	Oryzias_latipes
ENSVPAG00000007183	SSB	99	58.168	ENSORLG00020022574	ssb	100	58.416	Oryzias_latipes_hni
ENSVPAG00000007183	SSB	99	58.168	ENSORLG00015016592	ssb	100	58.416	Oryzias_latipes_hsok
ENSVPAG00000007183	SSB	98	58.145	ENSOMEG00000003193	ssb	100	59.057	Oryzias_melastigma
ENSVPAG00000007183	SSB	100	87.915	ENSOGAG00000029768	SSB	100	87.915	Otolemur_garnettii
ENSVPAG00000007183	SSB	100	94.321	ENSOARG00000002906	SSB	100	94.321	Ovis_aries
ENSVPAG00000007183	SSB	97	72.589	ENSPPAG00000006189	-	96	76.613	Pan_paniscus
ENSVPAG00000007183	SSB	100	76.543	ENSPPAG00000032427	-	100	86.822	Pan_paniscus
ENSVPAG00000007183	SSB	100	93.627	ENSPPAG00000042673	SSB	100	93.627	Pan_paniscus
ENSVPAG00000007183	SSB	100	94.581	ENSPPRG00000006599	SSB	100	94.581	Panthera_pardus
ENSVPAG00000007183	SSB	100	94.335	ENSPTIG00000011021	SSB	97	94.335	Panthera_tigris_altaica
ENSVPAG00000007183	SSB	100	93.627	ENSPTRG00000012620	SSB	100	93.627	Pan_troglodytes
ENSVPAG00000007183	SSB	100	72.840	ENSPTRG00000042880	-	100	72.840	Pan_troglodytes
ENSVPAG00000007183	SSB	100	94.074	ENSPANG00000007440	SSB	100	94.074	Papio_anubis
ENSVPAG00000007183	SSB	96	66.494	ENSPANG00000031877	-	91	66.494	Papio_anubis
ENSVPAG00000007183	SSB	100	66.914	ENSPANG00000034126	-	100	67.407	Papio_anubis
ENSVPAG00000007183	SSB	98	62.250	ENSPKIG00000019325	ssb	99	63.119	Paramormyrops_kingsleyae
ENSVPAG00000007183	SSB	100	76.528	ENSPSIG00000002265	SSB	93	76.773	Pelodiscus_sinensis
ENSVPAG00000007183	SSB	86	55.429	ENSPMGG00000020075	ssb	92	55.874	Periophthalmus_magnuspinnatus
ENSVPAG00000007183	SSB	82	50.303	ENSPMAG00000002982	ssb	89	48.825	Petromyzon_marinus
ENSVPAG00000007183	SSB	100	83.251	ENSPCIG00000028591	-	100	83.498	Phascolarctos_cinereus
ENSVPAG00000007183	SSB	99	57.072	ENSPFOG00000009650	ssb	100	57.320	Poecilia_formosa
ENSVPAG00000007183	SSB	99	57.178	ENSPLAG00000020498	ssb	100	57.426	Poecilia_latipinna
ENSVPAG00000007183	SSB	99	56.576	ENSPMEG00000001051	ssb	100	57.072	Poecilia_mexicana
ENSVPAG00000007183	SSB	95	57.812	ENSPREG00000003708	ssb	99	58.073	Poecilia_reticulata
ENSVPAG00000007183	SSB	100	94.321	ENSPPYG00000012919	SSB	100	94.321	Pongo_abelii
ENSVPAG00000007183	SSB	95	87.990	ENSPCAG00000010276	SSB	100	87.990	Procavia_capensis
ENSVPAG00000007183	SSB	100	91.605	ENSPCOG00000015741	-	100	91.605	Propithecus_coquereli
ENSVPAG00000007183	SSB	100	82.716	ENSPCOG00000023189	-	100	82.716	Propithecus_coquereli
ENSVPAG00000007183	SSB	88	97.458	ENSPVAG00000006615	SSB	100	97.458	Pteropus_vampyrus
ENSVPAG00000007183	SSB	99	54.839	ENSPNYG00000006444	ssb	100	54.591	Pundamilia_nyererei
ENSVPAG00000007183	SSB	98	56.650	ENSPNAG00000011708	ssb	100	57.767	Pygocentrus_nattereri
ENSVPAG00000007183	SSB	100	77.910	ENSRNOG00000007998	Ssb	100	77.910	Rattus_norvegicus
ENSVPAG00000007183	SSB	100	78.431	ENSRNOG00000011606	AABR07061825.1	100	78.431	Rattus_norvegicus
ENSVPAG00000007183	SSB	100	67.980	ENSRBIG00000029918	-	100	67.980	Rhinopithecus_bieti
ENSVPAG00000007183	SSB	94	78.364	ENSRBIG00000041232	-	98	78.364	Rhinopithecus_bieti
ENSVPAG00000007183	SSB	100	77.317	ENSRBIG00000041972	SSB	88	98.261	Rhinopithecus_bieti
ENSVPAG00000007183	SSB	89	85.912	ENSRBIG00000041608	-	98	85.912	Rhinopithecus_bieti
ENSVPAG00000007183	SSB	98	84.500	ENSRROG00000034102	-	98	84.422	Rhinopithecus_roxellana
ENSVPAG00000007183	SSB	100	77.833	ENSRROG00000007149	-	100	77.833	Rhinopithecus_roxellana
ENSVPAG00000007183	SSB	100	94.074	ENSRROG00000040346	SSB	100	94.074	Rhinopithecus_roxellana
ENSVPAG00000007183	SSB	98	79.040	ENSRROG00000031684	-	100	79.040	Rhinopithecus_roxellana
ENSVPAG00000007183	SSB	100	94.321	ENSSBOG00000027204	SSB	100	94.321	Saimiri_boliviensis_boliviensis
ENSVPAG00000007183	SSB	100	82.512	ENSSHAG00000018062	SSB	100	83.251	Sarcophilus_harrisii
ENSVPAG00000007183	SSB	99	64.059	ENSSFOG00015000550	ssb	100	64.548	Scleropages_formosus
ENSVPAG00000007183	SSB	98	53.483	ENSSMAG00000013885	ssb	99	58.021	Scophthalmus_maximus
ENSVPAG00000007183	SSB	99	57.568	ENSSDUG00000020117	ssb	100	57.816	Seriola_dumerili
ENSVPAG00000007183	SSB	99	55.500	ENSSLDG00000002525	ssb	100	55.500	Seriola_lalandi_dorsalis
ENSVPAG00000007183	SSB	95	85.901	ENSSARG00000007747	SSB	100	85.901	Sorex_araneus
ENSVPAG00000007183	SSB	100	76.658	ENSSPUG00000012112	SSB	100	76.658	Sphenodon_punctatus
ENSVPAG00000007183	SSB	98	56.533	ENSSPAG00000005696	ssb	100	57.214	Stegastes_partitus
ENSVPAG00000007183	SSB	98	77.582	ENSSSCG00000015938	SSB	98	78.141	Sus_scrofa
ENSVPAG00000007183	SSB	100	75.061	ENSTGUG00000007942	SSB	100	75.061	Taeniopygia_guttata
ENSVPAG00000007183	SSB	99	57.500	ENSTRUG00000017839	ssb	100	58.105	Takifugu_rubripes
ENSVPAG00000007183	SSB	91	60.054	ENSTNIG00000000915	ssb	100	60.054	Tetraodon_nigroviridis
ENSVPAG00000007183	SSB	83	98.261	ENSTBEG00000009056	SSB	82	98.261	Tupaia_belangeri
ENSVPAG00000007183	SSB	100	94.335	ENSTTRG00000002152	SSB	100	94.335	Tursiops_truncatus
ENSVPAG00000007183	SSB	94	97.347	ENSUAMG00000027833	SSB	99	97.347	Ursus_americanus
ENSVPAG00000007183	SSB	100	94.581	ENSUMAG00000013907	SSB	100	94.581	Ursus_maritimus
ENSVPAG00000007183	SSB	100	94.089	ENSVVUG00000016573	SSB	78	94.089	Vulpes_vulpes
ENSVPAG00000007183	SSB	99	62.374	ENSXETG00000025402	ssb	93	64.232	Xenopus_tropicalis
ENSVPAG00000007183	SSB	95	55.614	ENSXCOG00000019109	ssb	99	55.875	Xiphophorus_couchianus
ENSVPAG00000007183	SSB	99	56.158	ENSXMAG00000004888	ssb	100	56.404	Xiphophorus_maculatus