EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000007333 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 86533 bases
Position: chrGeneScaffold_156:43470-130002
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000006820	R3H	PF01424.22	4.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000007334	R3HDM1-201	3276	-	ENSVPAP00000006820	1091 (aa)	-	UPI00018BD976

Gene Model

Click here to download ENSVPAG00000007333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000007333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000007333	R3HDM1	72	67.580	ENSVPAG00000008656	R3HDM2	73	67.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000007333	R3HDM1	93	91.228	ENSG00000048991	R3HDM1	99	95.946	Homo_sapiens
ENSVPAG00000007333	R3HDM1	74	47.630	ENSAPOG00000020850	r3hdm1	85	47.783	Acanthochromis_polyacanthus
ENSVPAG00000007333	R3HDM1	93	100.000	ENSAMEG00000014886	R3HDM1	93	100.000	Ailuropoda_melanoleuca
ENSVPAG00000007333	R3HDM1	74	46.878	ENSAOCG00000005192	r3hdm1	85	46.961	Amphiprion_ocellaris
ENSVPAG00000007333	R3HDM1	74	49.255	ENSAPEG00000016108	r3hdm1	87	49.364	Amphiprion_percula
ENSVPAG00000007333	R3HDM1	74	48.548	ENSATEG00000000232	r3hdm1	87	48.605	Anabas_testudineus
ENSVPAG00000007333	R3HDM1	93	76.629	ENSAPLG00000015231	R3HDM1	93	76.836	Anas_platyrhynchos
ENSVPAG00000007333	R3HDM1	93	74.750	ENSACAG00000001676	R3HDM1	93	74.651	Anolis_carolinensis
ENSVPAG00000007333	R3HDM1	93	91.228	ENSANAG00000035334	R3HDM1	97	94.485	Aotus_nancymaae
ENSVPAG00000007333	R3HDM1	73	49.413	ENSACLG00000027282	r3hdm1	87	49.651	Astatotilapia_calliptera
ENSVPAG00000007333	R3HDM1	80	74.545	ENSAMXG00000003536	r3hdm1	85	74.453	Astyanax_mexicanus
ENSVPAG00000007333	R3HDM1	80	80.292	ENSAMXG00000012861	R3HDM1	86	80.220	Astyanax_mexicanus
ENSVPAG00000007333	R3HDM1	93	92.982	ENSBTAG00000013302	R3HDM1	97	92.982	Bos_taurus
ENSVPAG00000007333	R3HDM1	93	89.876	ENSCJAG00000011718	R3HDM1	97	94.118	Callithrix_jacchus
ENSVPAG00000007333	R3HDM1	93	100.000	ENSCAFG00000005075	R3HDM1	93	100.000	Canis_familiaris
ENSVPAG00000007333	R3HDM1	93	100.000	ENSCAFG00020016119	R3HDM1	93	100.000	Canis_lupus_dingo
ENSVPAG00000007333	R3HDM1	93	94.737	ENSCHIG00000020851	R3HDM1	93	94.737	Capra_hircus
ENSVPAG00000007333	R3HDM1	93	85.965	ENSCPOG00000012784	R3HDM1	88	92.647	Cavia_porcellus
ENSVPAG00000007333	R3HDM1	93	89.979	ENSCCAG00000027199	R3HDM1	97	94.118	Cebus_capucinus
ENSVPAG00000007333	R3HDM1	93	94.132	ENSCATG00000023642	R3HDM1	97	94.118	Cercocebus_atys
ENSVPAG00000007333	R3HDM1	93	84.746	ENSCLAG00000007962	R3HDM1	93	84.746	Chinchilla_lanigera
ENSVPAG00000007333	R3HDM1	93	91.228	ENSCSAG00000016356	R3HDM1	93	91.228	Chlorocebus_sabaeus
ENSVPAG00000007333	R3HDM1	75	81.633	ENSCHOG00000013638	R3HDM1	78	81.633	Choloepus_hoffmanni
ENSVPAG00000007333	R3HDM1	88	76.629	ENSCPBG00000009645	R3HDM1	100	86.716	Chrysemys_picta_bellii
ENSVPAG00000007333	R3HDM1	93	89.588	ENSCANG00000034748	R3HDM1	97	94.118	Colobus_angolensis_palliatus
ENSVPAG00000007333	R3HDM1	93	89.474	ENSCGRG00001012357	R3hdm1	90	89.474	Cricetulus_griseus_chok1gshd
ENSVPAG00000007333	R3HDM1	93	89.474	ENSCGRG00000012080	R3hdm1	93	89.474	Cricetulus_griseus_crigri
ENSVPAG00000007333	R3HDM1	74	43.017	ENSCSEG00000008944	r3hdm1	80	59.184	Cynoglossus_semilaevis
ENSVPAG00000007333	R3HDM1	74	48.548	ENSCVAG00000007582	r3hdm1	88	46.205	Cyprinodon_variegatus
ENSVPAG00000007333	R3HDM1	93	89.594	ENSDNOG00000000771	R3HDM1	92	89.594	Dasypus_novemcinctus
ENSVPAG00000007333	R3HDM1	93	85.965	ENSETEG00000013606	R3HDM1	93	85.965	Echinops_telfairi
ENSVPAG00000007333	R3HDM1	54	42.581	ENSEBUG00000014746	arpp21	94	42.289	Eptatretus_burgeri
ENSVPAG00000007333	R3HDM1	93	100.000	ENSEASG00005007392	R3HDM1	97	100.000	Equus_asinus_asinus
ENSVPAG00000007333	R3HDM1	93	100.000	ENSECAG00000019114	R3HDM1	97	100.000	Equus_caballus
ENSVPAG00000007333	R3HDM1	81	92.982	ENSEEUG00000012589	R3HDM1	81	92.982	Erinaceus_europaeus
ENSVPAG00000007333	R3HDM1	88	55.030	ENSELUG00000004909	R3HDM1	94	55.467	Esox_lucius
ENSVPAG00000007333	R3HDM1	87	50.096	ENSELUG00000014413	r3hdm1	96	50.911	Esox_lucius
ENSVPAG00000007333	R3HDM1	93	98.246	ENSFCAG00000027113	R3HDM1	97	98.246	Felis_catus
ENSVPAG00000007333	R3HDM1	84	70.432	ENSFALG00000013731	R3HDM1	87	56.609	Ficedula_albicollis
ENSVPAG00000007333	R3HDM1	93	84.163	ENSFDAG00000016478	R3HDM1	85	93.382	Fukomys_damarensis
ENSVPAG00000007333	R3HDM1	74	46.556	ENSFHEG00000018713	r3hdm1	91	45.632	Fundulus_heteroclitus
ENSVPAG00000007333	R3HDM1	80	82.418	ENSGALG00000012246	R3HDM1	96	82.353	Gallus_gallus
ENSVPAG00000007333	R3HDM1	74	49.361	ENSGAFG00000006203	r3hdm1	87	49.652	Gambusia_affinis
ENSVPAG00000007333	R3HDM1	81	45.612	ENSGACG00000014925	r3hdm1	94	45.610	Gasterosteus_aculeatus
ENSVPAG00000007333	R3HDM1	85	84.672	ENSGAGG00000007840	R3HDM1	93	74.689	Gopherus_agassizii
ENSVPAG00000007333	R3HDM1	93	91.228	ENSGGOG00000008156	R3HDM1	97	94.485	Gorilla_gorilla
ENSVPAG00000007333	R3HDM1	93	85.000	ENSHGLG00000015718	R3HDM1	85	93.382	Heterocephalus_glaber_female
ENSVPAG00000007333	R3HDM1	87	77.193	ENSHGLG00100015374	-	96	77.193	Heterocephalus_glaber_male
ENSVPAG00000007333	R3HDM1	93	84.800	ENSHGLG00100003184	-	93	84.700	Heterocephalus_glaber_male
ENSVPAG00000007333	R3HDM1	73	45.024	ENSHCOG00000013366	r3hdm1	81	59.569	Hippocampus_comes
ENSVPAG00000007333	R3HDM1	81	67.368	ENSIPUG00000013629	r3hdm1	90	69.231	Ictalurus_punctatus
ENSVPAG00000007333	R3HDM1	66	74.909	ENSIPUG00000001676	R3HDM1	89	57.604	Ictalurus_punctatus
ENSVPAG00000007333	R3HDM1	93	92.982	ENSSTOG00000007572	R3HDM1	93	92.982	Ictidomys_tridecemlineatus
ENSVPAG00000007333	R3HDM1	88	67.720	ENSLACG00000005334	R3HDM1	92	67.988	Latimeria_chalumnae
ENSVPAG00000007333	R3HDM1	88	64.826	ENSLOCG00000001641	r3hdm1	92	64.315	Lepisosteus_oculatus
ENSVPAG00000007333	R3HDM1	93	91.228	ENSLAFG00000009065	R3HDM1	93	91.228	Loxodonta_africana
ENSVPAG00000007333	R3HDM1	93	91.228	ENSMFAG00000030331	R3HDM1	97	94.485	Macaca_fascicularis
ENSVPAG00000007333	R3HDM1	93	91.228	ENSMMUG00000009844	R3HDM1	97	94.485	Macaca_mulatta
ENSVPAG00000007333	R3HDM1	93	91.228	ENSMNEG00000027793	R3HDM1	97	94.485	Macaca_nemestrina
ENSVPAG00000007333	R3HDM1	93	91.228	ENSMLEG00000043189	R3HDM1	97	94.485	Mandrillus_leucophaeus
ENSVPAG00000007333	R3HDM1	73	50.292	ENSMAMG00000004532	r3hdm1	79	63.089	Mastacembelus_armatus
ENSVPAG00000007333	R3HDM1	73	49.413	ENSMZEG00005003157	r3hdm1	88	47.235	Maylandia_zebra
ENSVPAG00000007333	R3HDM1	93	76.269	ENSMGAG00000012461	R3HDM1	93	76.269	Meleagris_gallopavo
ENSVPAG00000007333	R3HDM1	93	91.228	ENSMAUG00000010315	R3hdm1	93	91.228	Mesocricetus_auratus
ENSVPAG00000007333	R3HDM1	89	89.474	ENSMICG00000042655	-	96	93.015	Microcebus_murinus
ENSVPAG00000007333	R3HDM1	93	89.474	ENSMICG00000005900	-	97	93.382	Microcebus_murinus
ENSVPAG00000007333	R3HDM1	79	75.973	ENSMODG00000000923	R3HDM1	86	75.744	Monodelphis_domestica
ENSVPAG00000007333	R3HDM1	88	46.093	ENSMALG00000009000	r3hdm1	83	61.637	Monopterus_albus
ENSVPAG00000007333	R3HDM1	93	85.965	MGP_CAROLIEiJ_G0014543	R3hdm1	86	95.973	Mus_caroli
ENSVPAG00000007333	R3HDM1	93	85.965	ENSMUSG00000056211	R3hdm1	86	95.973	Mus_musculus
ENSVPAG00000007333	R3HDM1	93	85.965	MGP_PahariEiJ_G0027779	R3hdm1	86	95.973	Mus_pahari
ENSVPAG00000007333	R3HDM1	93	85.965	MGP_SPRETEiJ_G0015350	R3hdm1	86	95.973	Mus_spretus
ENSVPAG00000007333	R3HDM1	93	100.000	ENSMPUG00000002412	R3HDM1	93	100.000	Mustela_putorius_furo
ENSVPAG00000007333	R3HDM1	93	92.982	ENSMLUG00000013824	R3HDM1	93	92.982	Myotis_lucifugus
ENSVPAG00000007333	R3HDM1	93	89.990	ENSNLEG00000008622	R3HDM1	97	94.485	Nomascus_leucogenys
ENSVPAG00000007333	R3HDM1	76	78.947	ENSMEUG00000011784	R3HDM1	86	78.947	Notamacropus_eugenii
ENSVPAG00000007333	R3HDM1	93	85.965	ENSODEG00000008607	R3HDM1	93	85.965	Octodon_degus
ENSVPAG00000007333	R3HDM1	87	45.366	ENSONIG00000012017	r3hdm1	92	45.784	Oreochromis_niloticus
ENSVPAG00000007333	R3HDM1	93	77.893	ENSOANG00000007987	R3HDM1	93	77.996	Ornithorhynchus_anatinus
ENSVPAG00000007333	R3HDM1	79	91.228	ENSOCUG00000017366	R3HDM1	87	91.228	Oryctolagus_cuniculus
ENSVPAG00000007333	R3HDM1	73	46.968	ENSORLG00000004297	r3hdm1	86	47.381	Oryzias_latipes
ENSVPAG00000007333	R3HDM1	73	47.524	ENSORLG00015017355	r3hdm1	85	47.387	Oryzias_latipes_hsok
ENSVPAG00000007333	R3HDM1	93	89.130	ENSOGAG00000003136	R3HDM1	93	89.762	Otolemur_garnettii
ENSVPAG00000007333	R3HDM1	93	94.737	ENSOARG00000010788	R3HDM1	93	94.737	Ovis_aries
ENSVPAG00000007333	R3HDM1	93	91.228	ENSPPAG00000027858	R3HDM1	97	94.485	Pan_paniscus
ENSVPAG00000007333	R3HDM1	93	98.246	ENSPPRG00000002626	R3HDM1	97	98.246	Panthera_pardus
ENSVPAG00000007333	R3HDM1	93	98.246	ENSPTIG00000016581	R3HDM1	97	98.246	Panthera_tigris_altaica
ENSVPAG00000007333	R3HDM1	93	91.228	ENSPTRG00000012494	R3HDM1	97	94.485	Pan_troglodytes
ENSVPAG00000007333	R3HDM1	93	91.228	ENSPANG00000026448	R3HDM1	97	94.485	Papio_anubis
ENSVPAG00000007333	R3HDM1	80	76.642	ENSPKIG00000004328	r3hdm1	87	76.923	Paramormyrops_kingsleyae
ENSVPAG00000007333	R3HDM1	93	75.648	ENSPSIG00000012915	R3HDM1	93	75.648	Pelodiscus_sinensis
ENSVPAG00000007333	R3HDM1	93	91.228	ENSPEMG00000015187	R3hdm1	93	91.228	Peromyscus_maniculatus_bairdii
ENSVPAG00000007333	R3HDM1	93	80.972	ENSPCIG00000002491	R3HDM1	97	80.702	Phascolarctos_cinereus
ENSVPAG00000007333	R3HDM1	74	47.333	ENSPFOG00000015036	r3hdm1	85	47.222	Poecilia_formosa
ENSVPAG00000007333	R3HDM1	74	49.651	ENSPLAG00000018042	r3hdm1	87	49.419	Poecilia_latipinna
ENSVPAG00000007333	R3HDM1	74	49.825	ENSPMEG00000023947	r3hdm1	87	49.593	Poecilia_mexicana
ENSVPAG00000007333	R3HDM1	74	49.709	ENSPREG00000007902	r3hdm1	81	61.125	Poecilia_reticulata
ENSVPAG00000007333	R3HDM1	93	91.228	ENSPPYG00000012815	R3HDM1	93	91.228	Pongo_abelii
ENSVPAG00000007333	R3HDM1	93	89.474	ENSPCAG00000006208	R3HDM1	93	89.474	Procavia_capensis
ENSVPAG00000007333	R3HDM1	93	92.982	ENSPCOG00000012698	R3HDM1	98	93.704	Propithecus_coquereli
ENSVPAG00000007333	R3HDM1	90	98.246	ENSPVAG00000006098	R3HDM1	90	98.246	Pteropus_vampyrus
ENSVPAG00000007333	R3HDM1	76	74.182	ENSPNAG00000013952	r3hdm1	85	74.088	Pygocentrus_nattereri
ENSVPAG00000007333	R3HDM1	80	77.007	ENSPNAG00000005436	R3HDM1	96	76.923	Pygocentrus_nattereri
ENSVPAG00000007333	R3HDM1	57	39.874	ENSPNAG00000004162	arpp21	79	38.690	Pygocentrus_nattereri
ENSVPAG00000007333	R3HDM1	93	85.965	ENSRNOG00000004099	R3hdm1	93	85.965	Rattus_norvegicus
ENSVPAG00000007333	R3HDM1	92	91.228	ENSRBIG00000033317	R3HDM1	100	94.096	Rhinopithecus_bieti
ENSVPAG00000007333	R3HDM1	93	91.228	ENSRROG00000034534	R3HDM1	97	94.118	Rhinopithecus_roxellana
ENSVPAG00000007333	R3HDM1	93	89.577	ENSSBOG00000020389	R3HDM1	97	94.118	Saimiri_boliviensis_boliviensis
ENSVPAG00000007333	R3HDM1	93	82.456	ENSSHAG00000016999	R3HDM1	97	82.456	Sarcophilus_harrisii
ENSVPAG00000007333	R3HDM1	88	55.092	ENSSFOG00015019851	-	85	65.829	Scleropages_formosus
ENSVPAG00000007333	R3HDM1	80	79.562	ENSSFOG00015014134	r3hdm1	87	79.487	Scleropages_formosus
ENSVPAG00000007333	R3HDM1	87	44.347	ENSSMAG00000001669	r3hdm1	91	44.466	Scophthalmus_maximus
ENSVPAG00000007333	R3HDM1	74	47.836	ENSSDUG00000010749	r3hdm1	87	48.741	Seriola_dumerili
ENSVPAG00000007333	R3HDM1	87	45.517	ENSSLDG00000004499	r3hdm1	88	46.199	Seriola_lalandi_dorsalis
ENSVPAG00000007333	R3HDM1	62	87.719	ENSSARG00000000352	-	61	87.719	Sorex_araneus
ENSVPAG00000007333	R3HDM1	93	77.098	ENSSPUG00000004167	R3HDM1	93	76.891	Sphenodon_punctatus
ENSVPAG00000007333	R3HDM1	74	49.716	ENSSPAG00000004648	r3hdm1	87	50.000	Stegastes_partitus
ENSVPAG00000007333	R3HDM1	93	98.246	ENSSSCG00000015692	R3HDM1	97	98.246	Sus_scrofa
ENSVPAG00000007333	R3HDM1	93	70.041	ENSTGUG00000011750	R3HDM1	93	69.938	Taeniopygia_guttata
ENSVPAG00000007333	R3HDM1	74	46.735	ENSTRUG00000011654	r3hdm1	87	46.286	Takifugu_rubripes
ENSVPAG00000007333	R3HDM1	74	47.331	ENSTNIG00000010362	r3hdm1	84	47.545	Tetraodon_nigroviridis
ENSVPAG00000007333	R3HDM1	93	98.246	ENSTTRG00000003935	R3HDM1	93	98.246	Tursiops_truncatus
ENSVPAG00000007333	R3HDM1	64	100.000	ENSUAMG00000024806	R3HDM1	93	100.000	Ursus_americanus
ENSVPAG00000007333	R3HDM1	93	100.000	ENSUMAG00000005552	R3HDM1	97	100.000	Ursus_maritimus
ENSVPAG00000007333	R3HDM1	93	98.246	ENSVVUG00000006457	R3HDM1	97	98.246	Vulpes_vulpes
ENSVPAG00000007333	R3HDM1	74	70.330	ENSXETG00000019330	r3hdm1	83	70.343	Xenopus_tropicalis
ENSVPAG00000007333	R3HDM1	65	49.664	ENSXCOG00000017448	r3hdm1	90	48.738	Xiphophorus_couchianus
ENSVPAG00000007333	R3HDM1	74	49.184	ENSXMAG00000007885	r3hdm1	85	49.010	Xiphophorus_maculatus