EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000007435 (Gene tree)
Gene ID: -
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 176319 bases
Position: chrGeneScaffold_1639:124682-301000
Accession: 9349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000006917	zf-C2H2	PF00096.26	4.5e-53	1	8
ENSVPAP00000006917	zf-C2H2	PF00096.26	4.5e-53	2	8
ENSVPAP00000006917	zf-C2H2	PF00096.26	4.5e-53	3	8
ENSVPAP00000006917	zf-C2H2	PF00096.26	4.5e-53	4	8
ENSVPAP00000006917	zf-C2H2	PF00096.26	4.5e-53	5	8
ENSVPAP00000006917	zf-C2H2	PF00096.26	4.5e-53	6	8
ENSVPAP00000006917	zf-C2H2	PF00096.26	4.5e-53	7	8
ENSVPAP00000006917	zf-C2H2	PF00096.26	4.5e-53	8	8
ENSVPAP00000006917	zf-met	PF12874.7	6.5e-22	1	4
ENSVPAP00000006917	zf-met	PF12874.7	6.5e-22	2	4
ENSVPAP00000006917	zf-met	PF12874.7	6.5e-22	3	4
ENSVPAP00000006917	zf-met	PF12874.7	6.5e-22	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000007436	PRDM5-201	1839	-	ENSVPAP00000006917	612 (aa)	-	UPI00018BDEFB

Gene Model

Click here to download ENSVPAG00000007435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000007435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000007435	PRDM5	75	36.752	ENSVPAG00000007465	ZNF233	59	36.752
ENSVPAG00000007435	PRDM5	80	32.121	ENSVPAG00000007062	ZNF131	52	32.121
ENSVPAG00000007435	PRDM5	75	34.236	ENSVPAG00000000139	ZNF235	65	34.236
ENSVPAG00000007435	PRDM5	77	36.755	ENSVPAG00000006418	ZNF596	73	36.755
ENSVPAG00000007435	PRDM5	74	33.499	ENSVPAG00000002698	-	99	33.499
ENSVPAG00000007435	PRDM5	67	32.203	ENSVPAG00000009652	-	80	32.203
ENSVPAG00000007435	PRDM5	69	46.087	ENSVPAG00000002606	-	61	46.087
ENSVPAG00000007435	PRDM5	74	33.171	ENSVPAG00000011869	ZNF345	90	33.171
ENSVPAG00000007435	PRDM5	74	33.721	ENSVPAG00000011867	-	87	33.721
ENSVPAG00000007435	PRDM5	76	37.500	ENSVPAG00000012526	ZFP1	88	34.137
ENSVPAG00000007435	PRDM5	75	35.314	ENSVPAG00000010456	ZNF768	59	38.095
ENSVPAG00000007435	PRDM5	68	33.908	ENSVPAG00000004995	GTF3A	80	33.908
ENSVPAG00000007435	PRDM5	74	38.743	ENSVPAG00000003027	ZFP69B	63	38.743
ENSVPAG00000007435	PRDM5	82	31.095	ENSVPAG00000000904	ZNF132	85	30.134

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000007435	PRDM5	100	87.582	ENSG00000138738	PRDM5	97	87.582	Homo_sapiens
ENSVPAG00000007435	PRDM5	100	67.047	ENSAPOG00000023220	prdm5	97	67.210	Acanthochromis_polyacanthus
ENSVPAG00000007435	PRDM5	94	83.247	ENSAMEG00000003050	PRDM5	100	83.420	Ailuropoda_melanoleuca
ENSVPAG00000007435	PRDM5	100	65.416	ENSACIG00000000406	prdm5	97	65.742	Amphilophus_citrinellus
ENSVPAG00000007435	PRDM5	100	67.700	ENSAOCG00000014806	prdm5	97	67.863	Amphiprion_ocellaris
ENSVPAG00000007435	PRDM5	100	61.672	ENSAPEG00000016846	prdm5	97	61.830	Amphiprion_percula
ENSVPAG00000007435	PRDM5	100	69.494	ENSATEG00000013829	prdm5	97	69.984	Anabas_testudineus
ENSVPAG00000007435	PRDM5	98	74.917	ENSAPLG00000013828	PRDM5	100	75.083	Anas_platyrhynchos
ENSVPAG00000007435	PRDM5	100	69.281	ENSACAG00000012999	PRDM5	97	69.281	Anolis_carolinensis
ENSVPAG00000007435	PRDM5	100	86.438	ENSANAG00000027411	PRDM5	97	86.438	Aotus_nancymaae
ENSVPAG00000007435	PRDM5	100	67.537	ENSACLG00000017996	prdm5	97	67.700	Astatotilapia_calliptera
ENSVPAG00000007435	PRDM5	87	67.039	ENSAMXG00000041864	prdm5	99	67.970	Astyanax_mexicanus
ENSVPAG00000007435	PRDM5	100	87.908	ENSBTAG00000012111	PRDM5	97	87.908	Bos_taurus
ENSVPAG00000007435	PRDM5	100	86.601	ENSCJAG00000003133	PRDM5	97	86.601	Callithrix_jacchus
ENSVPAG00000007435	PRDM5	95	76.552	ENSCAFG00000004179	PRDM5	100	76.552	Canis_familiaris
ENSVPAG00000007435	PRDM5	100	88.725	ENSCAFG00020017685	PRDM5	97	88.725	Canis_lupus_dingo
ENSVPAG00000007435	PRDM5	100	85.458	ENSCHIG00000018772	PRDM5	97	85.458	Capra_hircus
ENSVPAG00000007435	PRDM5	98	89.908	ENSTSYG00000009630	PRDM5	95	89.908	Carlito_syrichta
ENSVPAG00000007435	PRDM5	98	78.203	ENSCAPG00000015217	PRDM5	100	82.000	Cavia_aperea
ENSVPAG00000007435	PRDM5	98	82.816	ENSCPOG00000012883	PRDM5	100	82.000	Cavia_porcellus
ENSVPAG00000007435	PRDM5	100	86.601	ENSCCAG00000023157	PRDM5	97	86.601	Cebus_capucinus
ENSVPAG00000007435	PRDM5	99	90.502	ENSCATG00000042510	PRDM5	97	87.418	Cercocebus_atys
ENSVPAG00000007435	PRDM5	98	82.195	ENSCLAG00000005392	PRDM5	100	82.000	Chinchilla_lanigera
ENSVPAG00000007435	PRDM5	100	82.843	ENSCSAG00000003729	PRDM5	97	82.843	Chlorocebus_sabaeus
ENSVPAG00000007435	PRDM5	100	93.562	ENSCHOG00000007801	PRDM5	88	93.562	Choloepus_hoffmanni
ENSVPAG00000007435	PRDM5	100	73.752	ENSCPBG00000024735	PRDM5	97	73.752	Chrysemys_picta_bellii
ENSVPAG00000007435	PRDM5	100	87.418	ENSCANG00000036807	PRDM5	97	87.418	Colobus_angolensis_palliatus
ENSVPAG00000007435	PRDM5	100	79.747	ENSCGRG00001010581	Prdm5	96	79.747	Cricetulus_griseus_chok1gshd
ENSVPAG00000007435	PRDM5	98	71.595	ENSCGRG00000010996	-	99	71.595	Cricetulus_griseus_crigri
ENSVPAG00000007435	PRDM5	100	67.374	ENSCSEG00000019979	prdm5	97	67.374	Cynoglossus_semilaevis
ENSVPAG00000007435	PRDM5	100	69.657	ENSCVAG00000013692	prdm5	97	69.984	Cyprinodon_variegatus
ENSVPAG00000007435	PRDM5	100	67.752	ENSDARG00000006288	prdm5	97	67.863	Danio_rerio
ENSVPAG00000007435	PRDM5	94	86.957	ENSDNOG00000002009	PRDM5	100	86.957	Dasypus_novemcinctus
ENSVPAG00000007435	PRDM5	100	80.063	ENSDORG00000007739	Prdm5	96	80.063	Dipodomys_ordii
ENSVPAG00000007435	PRDM5	98	75.960	ENSETEG00000020268	PRDM5	100	75.960	Echinops_telfairi
ENSVPAG00000007435	PRDM5	99	59.344	ENSEBUG00000004301	prdm5	97	59.344	Eptatretus_burgeri
ENSVPAG00000007435	PRDM5	100	88.235	ENSEASG00005018365	PRDM5	97	88.235	Equus_asinus_asinus
ENSVPAG00000007435	PRDM5	99	90.494	ENSECAG00000011516	PRDM5	87	90.494	Equus_caballus
ENSVPAG00000007435	PRDM5	100	69.632	ENSECAG00000024747	-	95	69.632	Equus_caballus
ENSVPAG00000007435	PRDM5	99	81.004	ENSEEUG00000010306	PRDM5	97	81.004	Erinaceus_europaeus
ENSVPAG00000007435	PRDM5	99	69.524	ENSELUG00000005894	prdm5	90	69.905	Esox_lucius
ENSVPAG00000007435	PRDM5	100	88.562	ENSFCAG00000025656	PRDM5	97	88.562	Felis_catus
ENSVPAG00000007435	PRDM5	78	76.238	ENSFALG00000008381	PRDM5	94	76.238	Ficedula_albicollis
ENSVPAG00000007435	PRDM5	100	82.000	ENSFDAG00000021361	PRDM5	97	81.536	Fukomys_damarensis
ENSVPAG00000007435	PRDM5	99	67.647	ENSFHEG00000013040	prdm5	97	67.974	Fundulus_heteroclitus
ENSVPAG00000007435	PRDM5	100	65.172	ENSGMOG00000012038	prdm5	97	64.116	Gadus_morhua
ENSVPAG00000007435	PRDM5	100	75.285	ENSGALG00000011963	PRDM5	97	75.285	Gallus_gallus
ENSVPAG00000007435	PRDM5	99	71.183	ENSGAFG00000019233	prdm5	91	71.374	Gambusia_affinis
ENSVPAG00000007435	PRDM5	99	74.206	ENSGAGG00000020362	PRDM5	95	75.000	Gopherus_agassizii
ENSVPAG00000007435	PRDM5	100	87.582	ENSGGOG00000013562	PRDM5	97	87.582	Gorilla_gorilla
ENSVPAG00000007435	PRDM5	100	67.537	ENSHBUG00000023375	prdm5	97	68.026	Haplochromis_burtoni
ENSVPAG00000007435	PRDM5	100	75.980	ENSHGLG00000003010	PRDM5	97	76.961	Heterocephalus_glaber_female
ENSVPAG00000007435	PRDM5	100	82.000	ENSHGLG00100003696	PRDM5	97	81.536	Heterocephalus_glaber_male
ENSVPAG00000007435	PRDM5	99	69.331	ENSHCOG00000012131	prdm5	97	69.821	Hippocampus_comes
ENSVPAG00000007435	PRDM5	99	71.786	ENSIPUG00000001248	prdm5	97	69.707	Ictalurus_punctatus
ENSVPAG00000007435	PRDM5	98	78.261	ENSSTOG00000004741	PRDM5	100	78.667	Ictidomys_tridecemlineatus
ENSVPAG00000007435	PRDM5	98	80.380	ENSJJAG00000011464	Prdm5	100	81.333	Jaculus_jaculus
ENSVPAG00000007435	PRDM5	100	67.374	ENSKMAG00000013663	prdm5	97	67.374	Kryptolebias_marmoratus
ENSVPAG00000007435	PRDM5	100	69.331	ENSLBEG00000022736	prdm5	97	69.657	Labrus_bergylta
ENSVPAG00000007435	PRDM5	94	72.617	ENSLACG00000009187	PRDM5	99	72.964	Latimeria_chalumnae
ENSVPAG00000007435	PRDM5	99	70.915	ENSLOCG00000009778	prdm5	97	70.915	Lepisosteus_oculatus
ENSVPAG00000007435	PRDM5	100	83.333	ENSLAFG00000006532	PRDM5	97	83.333	Loxodonta_africana
ENSVPAG00000007435	PRDM5	99	90.057	ENSMFAG00000045845	PRDM5	97	87.582	Macaca_fascicularis
ENSVPAG00000007435	PRDM5	100	87.418	ENSMMUG00000003249	PRDM5	97	87.418	Macaca_mulatta
ENSVPAG00000007435	PRDM5	99	90.681	ENSMNEG00000019018	PRDM5	97	87.582	Macaca_nemestrina
ENSVPAG00000007435	PRDM5	98	87.479	ENSMLEG00000023145	PRDM5	100	87.479	Mandrillus_leucophaeus
ENSVPAG00000007435	PRDM5	100	69.544	ENSMAMG00000013419	prdm5	97	69.821	Mastacembelus_armatus
ENSVPAG00000007435	PRDM5	100	67.537	ENSMZEG00005020645	prdm5	97	68.026	Maylandia_zebra
ENSVPAG00000007435	PRDM5	98	75.083	ENSMGAG00000010710	PRDM5	100	75.083	Meleagris_gallopavo
ENSVPAG00000007435	PRDM5	100	79.747	ENSMAUG00000006768	Prdm5	96	79.747	Mesocricetus_auratus
ENSVPAG00000007435	PRDM5	100	85.458	ENSMICG00000001459	PRDM5	97	85.458	Microcebus_murinus
ENSVPAG00000007435	PRDM5	100	79.747	ENSMOCG00000016267	Prdm5	96	79.747	Microtus_ochrogaster
ENSVPAG00000007435	PRDM5	100	67.700	ENSMMOG00000006035	prdm5	97	67.700	Mola_mola
ENSVPAG00000007435	PRDM5	100	70.894	ENSMODG00000018942	PRDM5	97	70.894	Monodelphis_domestica
ENSVPAG00000007435	PRDM5	100	64.763	ENSMALG00000013934	prdm5	97	64.763	Monopterus_albus
ENSVPAG00000007435	PRDM5	100	80.063	MGP_CAROLIEiJ_G0028463	Prdm5	99	78.489	Mus_caroli
ENSVPAG00000007435	PRDM5	100	80.063	ENSMUSG00000029913	Prdm5	96	80.063	Mus_musculus
ENSVPAG00000007435	PRDM5	100	80.063	MGP_PahariEiJ_G0022203	Prdm5	96	80.063	Mus_pahari
ENSVPAG00000007435	PRDM5	100	80.063	MGP_SPRETEiJ_G0029467	Prdm5	96	80.063	Mus_spretus
ENSVPAG00000007435	PRDM5	100	88.072	ENSMPUG00000017415	PRDM5	97	88.072	Mustela_putorius_furo
ENSVPAG00000007435	PRDM5	94	76.644	ENSMLUG00000006097	PRDM5	100	76.644	Myotis_lucifugus
ENSVPAG00000007435	PRDM5	100	80.063	ENSNGAG00000018317	Prdm5	96	80.063	Nannospalax_galili
ENSVPAG00000007435	PRDM5	100	61.736	ENSNBRG00000004976	prdm5	97	64.065	Neolamprologus_brichardi
ENSVPAG00000007435	PRDM5	100	87.418	ENSNLEG00000009107	PRDM5	97	87.418	Nomascus_leucogenys
ENSVPAG00000007435	PRDM5	83	87.805	ENSMEUG00000006576	-	68	87.805	Notamacropus_eugenii
ENSVPAG00000007435	PRDM5	98	68.399	ENSOPRG00000011066	-	81	68.399	Ochotona_princeps
ENSVPAG00000007435	PRDM5	100	82.000	ENSODEG00000009133	PRDM5	96	81.329	Octodon_degus
ENSVPAG00000007435	PRDM5	100	69.657	ENSONIG00000003111	prdm5	97	70.147	Oreochromis_niloticus
ENSVPAG00000007435	PRDM5	64	64.444	ENSOANG00000006197	-	100	64.444	Ornithorhynchus_anatinus
ENSVPAG00000007435	PRDM5	99	69.539	ENSOANG00000015109	PRDM5	94	69.539	Ornithorhynchus_anatinus
ENSVPAG00000007435	PRDM5	96	82.283	ENSOCUG00000013454	PRDM5	100	82.283	Oryctolagus_cuniculus
ENSVPAG00000007435	PRDM5	100	67.374	ENSORLG00000016247	prdm5	97	67.700	Oryzias_latipes
ENSVPAG00000007435	PRDM5	100	67.537	ENSORLG00020018051	prdm5	97	67.700	Oryzias_latipes_hni
ENSVPAG00000007435	PRDM5	100	67.374	ENSORLG00015013760	prdm5	97	67.700	Oryzias_latipes_hsok
ENSVPAG00000007435	PRDM5	100	67.590	ENSOMEG00000005143	prdm5	97	67.752	Oryzias_melastigma
ENSVPAG00000007435	PRDM5	87	81.544	ENSOGAG00000009996	PRDM5	98	81.121	Otolemur_garnettii
ENSVPAG00000007435	PRDM5	98	88.624	ENSOARG00000015473	PRDM5	100	89.278	Ovis_aries
ENSVPAG00000007435	PRDM5	98	87.521	ENSPPAG00000043045	PRDM5	100	87.564	Pan_paniscus
ENSVPAG00000007435	PRDM5	100	88.562	ENSPPRG00000001020	PRDM5	97	88.562	Panthera_pardus
ENSVPAG00000007435	PRDM5	98	88.481	ENSPTIG00000010807	PRDM5	95	88.481	Panthera_tigris_altaica
ENSVPAG00000007435	PRDM5	100	87.418	ENSPTRG00000016403	PRDM5	97	87.418	Pan_troglodytes
ENSVPAG00000007435	PRDM5	99	90.057	ENSPANG00000023612	PRDM5	97	87.582	Papio_anubis
ENSVPAG00000007435	PRDM5	100	51.712	ENSPKIG00000015492	prdm5	97	51.140	Paramormyrops_kingsleyae
ENSVPAG00000007435	PRDM5	100	73.984	ENSPSIG00000013505	PRDM5	97	73.984	Pelodiscus_sinensis
ENSVPAG00000007435	PRDM5	100	64.600	ENSPMGG00000012622	prdm5	97	65.090	Periophthalmus_magnuspinnatus
ENSVPAG00000007435	PRDM5	76	67.883	ENSPMAG00000005248	prdm5	100	67.883	Petromyzon_marinus
ENSVPAG00000007435	PRDM5	98	68.338	ENSPFOG00000018630	prdm5	95	68.602	Poecilia_formosa
ENSVPAG00000007435	PRDM5	100	69.494	ENSPLAG00000014148	prdm5	97	69.494	Poecilia_latipinna
ENSVPAG00000007435	PRDM5	100	67.863	ENSPMEG00000018002	prdm5	97	67.863	Poecilia_mexicana
ENSVPAG00000007435	PRDM5	100	67.863	ENSPREG00000018366	prdm5	97	67.863	Poecilia_reticulata
ENSVPAG00000007435	PRDM5	100	87.255	ENSPPYG00000015031	PRDM5	97	87.255	Pongo_abelii
ENSVPAG00000007435	PRDM5	98	78.947	ENSPCAG00000011671	PRDM5	100	78.947	Procavia_capensis
ENSVPAG00000007435	PRDM5	100	82.000	ENSPCOG00000022828	PRDM5	97	81.209	Propithecus_coquereli
ENSVPAG00000007435	PRDM5	98	79.633	ENSPVAG00000012309	PRDM5	100	79.633	Pteropus_vampyrus
ENSVPAG00000007435	PRDM5	100	67.537	ENSPNYG00000012194	prdm5	97	67.700	Pundamilia_nyererei
ENSVPAG00000007435	PRDM5	99	67.647	ENSPNAG00000026181	prdm5	97	67.974	Pygocentrus_nattereri
ENSVPAG00000007435	PRDM5	96	66.156	ENSPNAG00000023191	-	99	66.156	Pygocentrus_nattereri
ENSVPAG00000007435	PRDM5	99	80.108	ENSRNOG00000023679	Prdm5	95	80.108	Rattus_norvegicus
ENSVPAG00000007435	PRDM5	100	85.621	ENSRBIG00000041307	PRDM5	97	85.621	Rhinopithecus_bieti
ENSVPAG00000007435	PRDM5	98	80.467	ENSRROG00000035343	PRDM5	100	80.467	Rhinopithecus_roxellana
ENSVPAG00000007435	PRDM5	100	86.601	ENSSBOG00000022100	PRDM5	97	86.601	Saimiri_boliviensis_boliviensis
ENSVPAG00000007435	PRDM5	94	72.541	ENSSHAG00000003250	PRDM5	100	72.951	Sarcophilus_harrisii
ENSVPAG00000007435	PRDM5	100	64.437	ENSSFOG00015020478	prdm5	97	64.927	Scleropages_formosus
ENSVPAG00000007435	PRDM5	100	69.821	ENSSMAG00000018844	prdm5	97	69.821	Scophthalmus_maximus
ENSVPAG00000007435	PRDM5	99	70.992	ENSSDUG00000020397	prdm5	97	67.863	Seriola_dumerili
ENSVPAG00000007435	PRDM5	99	72.451	ENSSLDG00000013353	prdm5	97	67.863	Seriola_lalandi_dorsalis
ENSVPAG00000007435	PRDM5	98	77.778	ENSSARG00000014129	-	80	77.778	Sorex_araneus
ENSVPAG00000007435	PRDM5	100	74.667	ENSSPUG00000009941	PRDM5	97	74.346	Sphenodon_punctatus
ENSVPAG00000007435	PRDM5	100	69.657	ENSSPAG00000013866	prdm5	97	70.147	Stegastes_partitus
ENSVPAG00000007435	PRDM5	100	89.052	ENSSSCG00000009101	PRDM5	97	89.052	Sus_scrofa
ENSVPAG00000007435	PRDM5	98	74.290	ENSTGUG00000001920	PRDM5	100	74.290	Taeniopygia_guttata
ENSVPAG00000007435	PRDM5	100	67.047	ENSTRUG00000013850	prdm5	97	67.047	Takifugu_rubripes
ENSVPAG00000007435	PRDM5	100	57.003	ENSTNIG00000005901	prdm5	97	57.003	Tetraodon_nigroviridis
ENSVPAG00000007435	PRDM5	98	91.781	ENSTBEG00000015386	PRDM5	86	91.781	Tupaia_belangeri
ENSVPAG00000007435	PRDM5	100	88.562	ENSTTRG00000010996	PRDM5	97	88.562	Tursiops_truncatus
ENSVPAG00000007435	PRDM5	98	84.913	ENSUAMG00000009994	PRDM5	84	84.913	Ursus_americanus
ENSVPAG00000007435	PRDM5	98	88.648	ENSUMAG00000003733	PRDM5	99	88.648	Ursus_maritimus
ENSVPAG00000007435	PRDM5	96	88.927	ENSVVUG00000013192	PRDM5	100	88.927	Vulpes_vulpes
ENSVPAG00000007435	PRDM5	100	68.842	ENSXETG00000002101	prdm5	97	68.842	Xenopus_tropicalis
ENSVPAG00000007435	PRDM5	100	67.537	ENSXCOG00000008567	prdm5	97	68.189	Xiphophorus_couchianus
ENSVPAG00000007435	PRDM5	99	70.992	ENSXMAG00000013825	prdm5	97	68.189	Xiphophorus_maculatus