EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000007665 (Gene tree)
Gene ID: -
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 160384 bases
Position: chrGeneScaffold_3138:174725-335108
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000007129	SpoU_methylase	PF00588.19	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000007665	TARBP1-201	4239	-	ENSVPAP00000007129	1413 (aa)	-	UPI00018BD887

Gene Model

Click here to download ENSVPAG00000007665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000007665's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000007665	TARBP1	87	92.784	ENSG00000059588	TARBP1	80	92.784	Homo_sapiens
ENSVPAG00000007665	TARBP1	75	71.569	ENSAPOG00000016419	si:dkey-85a20.4	66	71.569	Acanthochromis_polyacanthus
ENSVPAG00000007665	TARBP1	81	90.722	ENSAMEG00000003359	TARBP1	86	90.722	Ailuropoda_melanoleuca
ENSVPAG00000007665	TARBP1	74	76.344	ENSATEG00000020266	si:dkey-85a20.4	63	76.344	Anabas_testudineus
ENSVPAG00000007665	TARBP1	74	89.362	ENSAPLG00000007666	TARBP1	77	89.362	Anas_platyrhynchos
ENSVPAG00000007665	TARBP1	80	66.667	ENSACAG00000001142	TARBP1	72	66.667	Anolis_carolinensis
ENSVPAG00000007665	TARBP1	83	92.784	ENSANAG00000022031	TARBP1	79	92.784	Aotus_nancymaae
ENSVPAG00000007665	TARBP1	87	93.684	ENSBTAG00000004517	TARBP1	79	93.684	Bos_taurus
ENSVPAG00000007665	TARBP1	87	89.691	ENSCJAG00000018155	TARBP1	80	89.691	Callithrix_jacchus
ENSVPAG00000007665	TARBP1	85	90.625	ENSCAFG00000011533	TARBP1	87	90.625	Canis_familiaris
ENSVPAG00000007665	TARBP1	84	90.625	ENSCAFG00020027141	TARBP1	80	90.625	Canis_lupus_dingo
ENSVPAG00000007665	TARBP1	80	90.099	ENSCHIG00000011437	TARBP1	72	90.099	Capra_hircus
ENSVPAG00000007665	TARBP1	77	100.000	ENSTSYG00000010382	TARBP1	83	100.000	Carlito_syrichta
ENSVPAG00000007665	TARBP1	64	82.000	ENSCAPG00000010831	TARBP1	73	82.000	Cavia_aperea
ENSVPAG00000007665	TARBP1	87	82.000	ENSCPOG00000013995	TARBP1	80	82.000	Cavia_porcellus
ENSVPAG00000007665	TARBP1	85	91.753	ENSCCAG00000037278	TARBP1	80	91.753	Cebus_capucinus
ENSVPAG00000007665	TARBP1	85	91.753	ENSCATG00000011754	TARBP1	80	91.753	Cercocebus_atys
ENSVPAG00000007665	TARBP1	71	100.000	ENSCLAG00000003655	TARBP1	74	100.000	Chinchilla_lanigera
ENSVPAG00000007665	TARBP1	75	92.784	ENSCSAG00000010100	TARBP1	85	92.784	Chlorocebus_sabaeus
ENSVPAG00000007665	TARBP1	73	70.459	ENSCPBG00000005587	TARBP1	63	78.616	Chrysemys_picta_bellii
ENSVPAG00000007665	TARBP1	81	90.722	ENSCANG00000034343	TARBP1	86	90.722	Colobus_angolensis_palliatus
ENSVPAG00000007665	TARBP1	80	89.362	ENSCGRG00001016690	Tarbp1	72	89.362	Cricetulus_griseus_chok1gshd
ENSVPAG00000007665	TARBP1	79	89.362	ENSCGRG00000016893	Tarbp1	77	89.362	Cricetulus_griseus_crigri
ENSVPAG00000007665	TARBP1	70	77.419	ENSCSEG00000005255	si:dkey-85a20.4	64	77.419	Cynoglossus_semilaevis
ENSVPAG00000007665	TARBP1	74	70.238	ENSDARG00000079055	si:dkey-85a20.4	75	70.652	Danio_rerio
ENSVPAG00000007665	TARBP1	79	90.625	ENSDNOG00000008637	TARBP1	71	90.625	Dasypus_novemcinctus
ENSVPAG00000007665	TARBP1	70	88.889	ENSDORG00000007984	Tarbp1	76	88.889	Dipodomys_ordii
ENSVPAG00000007665	TARBP1	87	93.814	ENSEASG00005000252	TARBP1	80	93.814	Equus_asinus_asinus
ENSVPAG00000007665	TARBP1	87	93.814	ENSECAG00000023673	TARBP1	80	93.814	Equus_caballus
ENSVPAG00000007665	TARBP1	69	75.000	ENSELUG00000012193	si:dkey-85a20.4	61	75.000	Esox_lucius
ENSVPAG00000007665	TARBP1	83	90.722	ENSFCAG00000014183	TARBP1	78	90.722	Felis_catus
ENSVPAG00000007665	TARBP1	70	88.889	ENSFALG00000013565	TARBP1	76	85.417	Ficedula_albicollis
ENSVPAG00000007665	TARBP1	68	82.000	ENSFDAG00000001308	TARBP1	75	82.000	Fukomys_damarensis
ENSVPAG00000007665	TARBP1	71	74.468	ENSFHEG00000007565	si:dkey-85a20.4	65	74.468	Fundulus_heteroclitus
ENSVPAG00000007665	TARBP1	73	72.000	ENSGMOG00000004549	si:dkey-85a20.4	75	72.000	Gadus_morhua
ENSVPAG00000007665	TARBP1	74	85.417	ENSGALG00000011000	TARBP1	70	85.417	Gallus_gallus
ENSVPAG00000007665	TARBP1	73	73.404	ENSGAFG00000007387	si:dkey-85a20.4	63	73.404	Gambusia_affinis
ENSVPAG00000007665	TARBP1	74	74.194	ENSGACG00000005865	si:dkey-85a20.4	76	74.194	Gasterosteus_aculeatus
ENSVPAG00000007665	TARBP1	74	86.458	ENSGAGG00000012102	TARBP1	72	86.458	Gopherus_agassizii
ENSVPAG00000007665	TARBP1	77	92.784	ENSGGOG00000022879	TARBP1	84	92.784	Gorilla_gorilla
ENSVPAG00000007665	TARBP1	73	76.344	ENSHBUG00000008877	si:dkey-85a20.4	63	76.344	Haplochromis_burtoni
ENSVPAG00000007665	TARBP1	80	84.000	ENSHGLG00000011592	TARBP1	72	84.000	Heterocephalus_glaber_female
ENSVPAG00000007665	TARBP1	79	84.000	ENSHGLG00100015169	TARBP1	78	84.000	Heterocephalus_glaber_male
ENSVPAG00000007665	TARBP1	62	70.886	ENSIPUG00000005249	si:dkey-85a20.4	53	70.886	Ictalurus_punctatus
ENSVPAG00000007665	TARBP1	73	85.135	ENSSTOG00000032291	TARBP1	75	85.135	Ictidomys_tridecemlineatus
ENSVPAG00000007665	TARBP1	79	81.000	ENSJJAG00000017840	Tarbp1	75	81.000	Jaculus_jaculus
ENSVPAG00000007665	TARBP1	54	74.194	ENSKMAG00000017546	si:dkey-85a20.4	52	74.194	Kryptolebias_marmoratus
ENSVPAG00000007665	TARBP1	57	74.000	ENSLBEG00000012132	si:dkey-85a20.4	59	74.000	Labrus_bergylta
ENSVPAG00000007665	TARBP1	85	77.320	ENSLACG00000004337	TARBP1	79	77.320	Latimeria_chalumnae
ENSVPAG00000007665	TARBP1	78	76.344	ENSLOCG00000016214	si:dkey-85a20.4	68	76.344	Lepisosteus_oculatus
ENSVPAG00000007665	TARBP1	84	94.624	ENSLAFG00000011394	TARBP1	82	94.624	Loxodonta_africana
ENSVPAG00000007665	TARBP1	84	91.753	ENSMFAG00000041068	TARBP1	78	91.753	Macaca_fascicularis
ENSVPAG00000007665	TARBP1	82	91.753	ENSMMUG00000021703	TARBP1	77	91.753	Macaca_mulatta
ENSVPAG00000007665	TARBP1	85	91.753	ENSMNEG00000045002	TARBP1	80	91.753	Macaca_nemestrina
ENSVPAG00000007665	TARBP1	81	91.753	ENSMLEG00000044182	TARBP1	86	91.753	Mandrillus_leucophaeus
ENSVPAG00000007665	TARBP1	74	75.269	ENSMAMG00000021760	si:dkey-85a20.4	65	75.269	Mastacembelus_armatus
ENSVPAG00000007665	TARBP1	73	75.269	ENSMZEG00005005751	si:dkey-85a20.4	63	75.269	Maylandia_zebra
ENSVPAG00000007665	TARBP1	81	85.149	ENSMAUG00000020968	Tarbp1	73	85.149	Mesocricetus_auratus
ENSVPAG00000007665	TARBP1	77	88.660	ENSMICG00000015280	TARBP1	73	88.660	Microcebus_murinus
ENSVPAG00000007665	TARBP1	87	84.158	ENSMOCG00000004128	Tarbp1	81	84.158	Microtus_ochrogaster
ENSVPAG00000007665	TARBP1	74	73.810	ENSMMOG00000007795	si:dkey-85a20.4	63	73.810	Mola_mola
ENSVPAG00000007665	TARBP1	80	82.292	ENSMODG00000008504	TARBP1	71	82.292	Monodelphis_domestica
ENSVPAG00000007665	TARBP1	73	73.494	ENSMALG00000002916	si:dkey-85a20.4	66	73.494	Monopterus_albus
ENSVPAG00000007665	TARBP1	80	84.158	MGP_CAROLIEiJ_G0031729	Tarbp1	72	85.859	Mus_caroli
ENSVPAG00000007665	TARBP1	80	83.168	ENSMUSG00000090290	Tarbp1	72	84.848	Mus_musculus
ENSVPAG00000007665	TARBP1	80	85.149	MGP_PahariEiJ_G0023326	Tarbp1	72	86.869	Mus_pahari
ENSVPAG00000007665	TARBP1	80	89.362	MGP_SPRETEiJ_G0032846	Tarbp1	72	89.362	Mus_spretus
ENSVPAG00000007665	TARBP1	75	90.722	ENSMPUG00000002802	TARBP1	88	90.722	Mustela_putorius_furo
ENSVPAG00000007665	TARBP1	74	81.443	ENSMLUG00000002414	TARBP1	77	81.443	Myotis_lucifugus
ENSVPAG00000007665	TARBP1	85	92.784	ENSNLEG00000002518	TARBP1	80	92.784	Nomascus_leucogenys
ENSVPAG00000007665	TARBP1	64	90.099	ENSOPRG00000013822	TARBP1	57	90.099	Ochotona_princeps
ENSVPAG00000007665	TARBP1	80	82.000	ENSODEG00000005238	TARBP1	83	82.000	Octodon_degus
ENSVPAG00000007665	TARBP1	73	76.344	ENSONIG00000009789	si:dkey-85a20.4	73	76.344	Oreochromis_niloticus
ENSVPAG00000007665	TARBP1	87	85.437	ENSOCUG00000017418	TARBP1	79	88.542	Oryctolagus_cuniculus
ENSVPAG00000007665	TARBP1	79	71.287	ENSORLG00000010529	si:dkey-85a20.4	70	71.287	Oryzias_latipes
ENSVPAG00000007665	TARBP1	79	71.287	ENSORLG00020019264	si:dkey-85a20.4	70	71.287	Oryzias_latipes_hni
ENSVPAG00000007665	TARBP1	75	71.287	ENSORLG00015003276	si:dkey-85a20.4	65	71.287	Oryzias_latipes_hsok
ENSVPAG00000007665	TARBP1	79	95.714	ENSOGAG00000002379	TARBP1	70	95.714	Otolemur_garnettii
ENSVPAG00000007665	TARBP1	78	90.099	ENSOARG00000003434	TARBP1	77	90.099	Ovis_aries
ENSVPAG00000007665	TARBP1	81	91.753	ENSPPAG00000028097	TARBP1	86	91.753	Pan_paniscus
ENSVPAG00000007665	TARBP1	81	90.722	ENSPPRG00000013561	TARBP1	82	90.722	Panthera_pardus
ENSVPAG00000007665	TARBP1	80	92.424	ENSPTIG00000009281	TARBP1	87	92.424	Panthera_tigris_altaica
ENSVPAG00000007665	TARBP1	86	91.753	ENSPTRG00000002124	TARBP1	80	91.753	Pan_troglodytes
ENSVPAG00000007665	TARBP1	85	91.753	ENSPANG00000021933	TARBP1	80	91.753	Papio_anubis
ENSVPAG00000007665	TARBP1	76	68.627	ENSPKIG00000016716	si:dkey-85a20.4	66	68.627	Paramormyrops_kingsleyae
ENSVPAG00000007665	TARBP1	75	86.598	ENSPSIG00000010699	TARBP1	85	86.598	Pelodiscus_sinensis
ENSVPAG00000007665	TARBP1	79	89.474	ENSPEMG00000006888	Tarbp1	75	89.474	Peromyscus_maniculatus_bairdii
ENSVPAG00000007665	TARBP1	71	82.292	ENSPCIG00000029710	TARBP1	69	82.292	Phascolarctos_cinereus
ENSVPAG00000007665	TARBP1	73	74.468	ENSPFOG00000013020	si:dkey-85a20.4	73	74.468	Poecilia_formosa
ENSVPAG00000007665	TARBP1	73	74.468	ENSPLAG00000006044	si:dkey-85a20.4	63	74.468	Poecilia_latipinna
ENSVPAG00000007665	TARBP1	73	74.468	ENSPMEG00000017857	si:dkey-85a20.4	63	74.468	Poecilia_mexicana
ENSVPAG00000007665	TARBP1	73	74.468	ENSPREG00000022753	si:dkey-85a20.4	63	74.468	Poecilia_reticulata
ENSVPAG00000007665	TARBP1	78	92.784	ENSPPYG00000000102	TARBP1	81	92.784	Pongo_abelii
ENSVPAG00000007665	TARBP1	71	91.667	ENSPCAG00000004808	TARBP1	68	91.667	Procavia_capensis
ENSVPAG00000007665	TARBP1	86	92.784	ENSPCOG00000005666	TARBP1	79	92.784	Propithecus_coquereli
ENSVPAG00000007665	TARBP1	78	83.505	ENSPVAG00000014798	TARBP1	69	83.505	Pteropus_vampyrus
ENSVPAG00000007665	TARBP1	73	75.269	ENSPNYG00000019135	si:dkey-85a20.4	61	75.269	Pundamilia_nyererei
ENSVPAG00000007665	TARBP1	80	83.168	ENSRNOG00000053574	Tarbp1	72	83.168	Rattus_norvegicus
ENSVPAG00000007665	TARBP1	75	90.722	ENSRBIG00000043362	TARBP1	79	90.722	Rhinopithecus_bieti
ENSVPAG00000007665	TARBP1	85	90.722	ENSRROG00000029527	TARBP1	83	90.722	Rhinopithecus_roxellana
ENSVPAG00000007665	TARBP1	80	92.708	ENSSBOG00000034503	TARBP1	83	92.708	Saimiri_boliviensis_boliviensis
ENSVPAG00000007665	TARBP1	80	81.250	ENSSHAG00000000013	TARBP1	86	81.250	Sarcophilus_harrisii
ENSVPAG00000007665	TARBP1	75	73.118	ENSSFOG00015002660	si:dkey-85a20.4	72	73.118	Scleropages_formosus
ENSVPAG00000007665	TARBP1	73	76.344	ENSSMAG00000007081	si:dkey-85a20.4	63	76.344	Scophthalmus_maximus
ENSVPAG00000007665	TARBP1	73	76.344	ENSSDUG00000023566	si:dkey-85a20.4	63	76.344	Seriola_dumerili
ENSVPAG00000007665	TARBP1	73	76.344	ENSSLDG00000020200	si:dkey-85a20.4	64	76.344	Seriola_lalandi_dorsalis
ENSVPAG00000007665	TARBP1	72	93.750	ENSSARG00000012207	TARBP1	69	93.750	Sorex_araneus
ENSVPAG00000007665	TARBP1	86	85.417	ENSSPUG00000015364	TARBP1	79	85.417	Sphenodon_punctatus
ENSVPAG00000007665	TARBP1	73	76.344	ENSSPAG00000007213	si:dkey-85a20.4	64	76.344	Stegastes_partitus
ENSVPAG00000007665	TARBP1	87	92.784	ENSSSCG00000010160	TARBP1	79	92.784	Sus_scrofa
ENSVPAG00000007665	TARBP1	70	87.234	ENSTGUG00000010214	TARBP1	76	87.234	Taeniopygia_guttata
ENSVPAG00000007665	TARBP1	73	75.532	ENSTNIG00000016586	si:dkey-85a20.4	76	75.532	Tetraodon_nigroviridis
ENSVPAG00000007665	TARBP1	68	88.415	ENSTTRG00000008707	TARBP1	64	88.415	Tursiops_truncatus
ENSVPAG00000007665	TARBP1	76	100.000	ENSUMAG00000006730	TARBP1	83	100.000	Ursus_maritimus
ENSVPAG00000007665	TARBP1	81	90.625	ENSVVUG00000007460	TARBP1	87	90.625	Vulpes_vulpes
ENSVPAG00000007665	TARBP1	74	60.417	ENSXETG00000016224	tarbp1	77	60.417	Xenopus_tropicalis
ENSVPAG00000007665	TARBP1	67	72.619	ENSXCOG00000011779	si:dkey-85a20.4	74	72.619	Xiphophorus_couchianus
ENSVPAG00000007665	TARBP1	57	60.870	ENSXMAG00000009600	si:dkey-85a20.4	77	60.870	Xiphophorus_maculatus