EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000007698 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 25741 bases
Position: chrGeneScaffold_2193:380188-405928
Accession: 16638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000007159	PWI	PF01480.17	2.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000007698	SRRM1-201	2631	-	ENSVPAP00000007159	876 (aa)	-	UPI00018BDD81

Gene Model

Click here to download ENSVPAG00000007698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000007698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000007698	SRRM1	100	93.764	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSVPAG00000007698	SRRM1	100	96.123	ENSAMEG00000010075	SRRM1	96	96.123	Ailuropoda_melanoleuca
ENSVPAG00000007698	SRRM1	51	69.758	ENSAPLG00000002066	SRRM1	59	74.600	Anas_platyrhynchos
ENSVPAG00000007698	SRRM1	100	93.764	ENSBTAG00000013772	SRRM1	96	93.764	Bos_taurus
ENSVPAG00000007698	SRRM1	100	94.104	ENSCAFG00020020948	SRRM1	96	94.104	Canis_lupus_dingo
ENSVPAG00000007698	SRRM1	100	92.325	ENSCHIG00000014656	SRRM1	96	92.325	Capra_hircus
ENSVPAG00000007698	SRRM1	100	95.553	ENSTSYG00000006782	SRRM1	96	95.553	Carlito_syrichta
ENSVPAG00000007698	SRRM1	52	95.662	ENSCCAG00000029474	SRRM1	90	95.662	Cebus_capucinus
ENSVPAG00000007698	SRRM1	100	93.537	ENSCATG00000031303	SRRM1	96	93.537	Cercocebus_atys
ENSVPAG00000007698	SRRM1	100	93.424	ENSCANG00000028271	SRRM1	96	93.424	Colobus_angolensis_palliatus
ENSVPAG00000007698	SRRM1	100	93.311	ENSECAG00000026981	SRRM1	96	93.311	Equus_caballus
ENSVPAG00000007698	SRRM1	100	96.237	ENSFCAG00000000678	-	96	96.237	Felis_catus
ENSVPAG00000007698	SRRM1	100	93.651	ENSGGOG00000005209	SRRM1	96	93.651	Gorilla_gorilla
ENSVPAG00000007698	SRRM1	100	93.764	ENSSTOG00000014640	SRRM1	96	93.764	Ictidomys_tridecemlineatus
ENSVPAG00000007698	SRRM1	100	92.172	ENSLAFG00000013830	SRRM1	96	92.172	Loxodonta_africana
ENSVPAG00000007698	SRRM1	100	93.537	ENSMFAG00000025726	SRRM1	96	93.537	Macaca_fascicularis
ENSVPAG00000007698	SRRM1	100	93.424	ENSMMUG00000006645	SRRM1	96	93.424	Macaca_mulatta
ENSVPAG00000007698	SRRM1	100	93.537	ENSMNEG00000039415	SRRM1	96	93.537	Macaca_nemestrina
ENSVPAG00000007698	SRRM1	100	93.424	ENSMICG00000006553	SRRM1	96	93.424	Microcebus_murinus
ENSVPAG00000007698	SRRM1	100	93.764	ENSNLEG00000008966	SRRM1	96	93.764	Nomascus_leucogenys
ENSVPAG00000007698	SRRM1	92	95.320	ENSOARG00000006453	SRRM1	95	95.320	Ovis_aries
ENSVPAG00000007698	SRRM1	100	93.651	ENSPPAG00000043918	SRRM1	96	93.651	Pan_paniscus
ENSVPAG00000007698	SRRM1	100	96.237	ENSPPRG00000002509	SRRM1	96	96.237	Panthera_pardus
ENSVPAG00000007698	SRRM1	100	93.764	ENSPTRG00000000349	SRRM1	96	93.764	Pan_troglodytes
ENSVPAG00000007698	SRRM1	54	93.137	ENSPCAG00000015138	SRRM1	52	93.137	Procavia_capensis
ENSVPAG00000007698	SRRM1	100	90.091	ENSPCOG00000021311	SRRM1	96	90.091	Propithecus_coquereli
ENSVPAG00000007698	SRRM1	99	89.468	ENSRBIG00000035461	SRRM1	95	89.468	Rhinopithecus_bieti
ENSVPAG00000007698	SRRM1	100	93.424	ENSRROG00000035151	SRRM1	96	93.424	Rhinopithecus_roxellana
ENSVPAG00000007698	SRRM1	100	94.299	ENSSBOG00000019884	SRRM1	96	94.299	Saimiri_boliviensis_boliviensis
ENSVPAG00000007698	SRRM1	59	91.176	ENSSARG00000013718	SRRM1	56	92.810	Sorex_araneus
ENSVPAG00000007698	SRRM1	100	95.578	ENSSSCG00000032947	SRRM1	100	93.780	Sus_scrofa
ENSVPAG00000007698	SRRM1	100	94.983	ENSTBEG00000000100	SRRM1	96	94.983	Tupaia_belangeri
ENSVPAG00000007698	SRRM1	100	95.667	ENSTTRG00000009365	SRRM1	97	95.667	Tursiops_truncatus
ENSVPAG00000007698	SRRM1	93	93.659	ENSUMAG00000013121	SRRM1	96	93.659	Ursus_maritimus
ENSVPAG00000007698	SRRM1	100	91.270	ENSVVUG00000026966	SRRM1	94	91.270	Vulpes_vulpes