EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000007860 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 1920 bases
Position: chrGeneScaffold_3162:68442-70361
Accession: 102542491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000007313	KH_1	PF00013.29	2e-13	1	1
ENSVPAP00000007313	DEAD	PF00270.29	1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000007860	-	1890	XM_006213017	ENSVPAP00000007313	629 (aa)	XP_006213079	UPI00018BDC10

Gene Model

Click here to download ENSVPAG00000007860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000007860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000007860	-	61	40.253	ENSVPAG00000009491	DDX4	54	40.253
ENSVPAG00000007860	-	61	46.939	ENSVPAG00000001476	DDX17	53	46.819
ENSVPAG00000007860	-	65	32.619	ENSVPAG00000001979	DDX52	71	32.319
ENSVPAG00000007860	-	56	34.540	ENSVPAG00000005601	DDX6	72	34.540
ENSVPAG00000007860	-	59	40.155	ENSVPAG00000007680	DDX3X	64	39.109
ENSVPAG00000007860	-	70	43.177	ENSVPAG00000010759	DDX5	73	42.544
ENSVPAG00000007860	-	59	35.509	ENSVPAG00000000627	DDX21	55	35.509
ENSVPAG00000007860	-	58	35.544	ENSVPAG00000000626	DDX50	50	35.544
ENSVPAG00000007860	-	88	65.405	ENSVPAG00000004969	-	94	64.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000007860	-	95	78.667	ENSAMEG00000019953	-	99	78.583	Ailuropoda_melanoleuca
ENSVPAG00000007860	-	95	76.246	ENSBTAG00000046635	-	96	76.246	Bos_taurus
ENSVPAG00000007860	-	61	79.265	ENSCAFG00020005312	-	82	79.058	Canis_lupus_dingo
ENSVPAG00000007860	-	97	77.124	ENSCHIG00000020582	-	99	77.124	Capra_hircus
ENSVPAG00000007860	-	95	69.028	ENSCPOG00000013960	-	99	65.507	Cavia_porcellus
ENSVPAG00000007860	-	93	69.687	ENSCLAG00000017424	-	99	65.327	Chinchilla_lanigera
ENSVPAG00000007860	-	98	75.279	ENSEASG00005001728	-	96	75.598	Equus_asinus_asinus
ENSVPAG00000007860	-	98	74.801	ENSECAG00000035665	-	99	75.120	Equus_caballus
ENSVPAG00000007860	-	98	74.801	ENSECAG00000037015	DDX53	99	75.120	Equus_caballus
ENSVPAG00000007860	-	51	84.848	ENSEEUG00000008838	-	72	84.848	Erinaceus_europaeus
ENSVPAG00000007860	-	69	67.898	ENSFDAG00000018215	-	93	67.898	Fukomys_damarensis
ENSVPAG00000007860	-	79	69.355	ENSFDAG00000020660	-	97	69.355	Fukomys_damarensis
ENSVPAG00000007860	-	96	76.364	ENSSTOG00000027719	-	80	76.364	Ictidomys_tridecemlineatus
ENSVPAG00000007860	-	99	72.930	ENSLAFG00000011531	-	99	72.930	Loxodonta_africana
ENSVPAG00000007860	-	94	79.764	ENSMPUG00000019441	-	99	79.373	Mustela_putorius_furo
ENSVPAG00000007860	-	99	68.750	ENSMLUG00000022321	-	99	69.859	Myotis_lucifugus
ENSVPAG00000007860	-	94	71.597	ENSMLUG00000022233	-	100	70.936	Myotis_lucifugus
ENSVPAG00000007860	-	99	70.866	ENSOCUG00000004437	-	100	70.958	Oryctolagus_cuniculus
ENSVPAG00000007860	-	97	70.968	ENSOGAG00000026282	-	98	71.935	Otolemur_garnettii
ENSVPAG00000007860	-	97	77.578	ENSOARG00000016525	-	100	77.578	Ovis_aries
ENSVPAG00000007860	-	99	75.000	ENSPPRG00000011327	-	100	75.613	Panthera_pardus
ENSVPAG00000007860	-	99	74.962	ENSPTIG00000001243	-	100	75.576	Panthera_tigris_altaica
ENSVPAG00000007860	-	99	75.397	ENSPVAG00000001484	-	99	76.032	Pteropus_vampyrus
ENSVPAG00000007860	-	99	80.317	ENSSSCG00000012169	-	100	80.317	Sus_scrofa
ENSVPAG00000007860	-	95	74.124	ENSTBEG00000014650	-	99	72.196	Tupaia_belangeri
ENSVPAG00000007860	-	59	50.923	ENSTBEG00000001513	-	97	50.923	Tupaia_belangeri
ENSVPAG00000007860	-	100	71.361	ENSTTRG00000016514	-	100	71.361	Tursiops_truncatus
ENSVPAG00000007860	-	95	80.833	ENSUAMG00000000177	-	95	80.592	Ursus_americanus
ENSVPAG00000007860	-	59	87.131	ENSUMAG00000011448	-	84	87.131	Ursus_maritimus
ENSVPAG00000007860	-	97	75.203	ENSVVUG00000012789	-	99	75.689	Vulpes_vulpes