EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000007941 (Gene tree)
Gene ID: -
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 122043 bases
Position: chrGeneScaffold_1163:22915-144957
Accession: 19057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000007389	ResIII	PF04851.15	9.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000007942	CHD6-201	7977	-	ENSVPAP00000007389	2658 (aa)	-	UPI00018BD226

Gene Model

Click here to download ENSVPAG00000007941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000007941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000007941	CHD6	61	73.469	ENSVPAG00000001374	CHD9	53	63.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000007941	CHD6	95	89.802	ENSG00000124177	CHD6	97	88.710	Homo_sapiens
ENSVPAG00000007941	CHD6	70	67.926	ENSAPOG00000013736	chd6	60	70.379	Acanthochromis_polyacanthus
ENSVPAG00000007941	CHD6	93	90.623	ENSAMEG00000009496	CHD6	92	90.623	Ailuropoda_melanoleuca
ENSVPAG00000007941	CHD6	69	80.208	ENSATEG00000005608	chd6	58	71.981	Anabas_testudineus
ENSVPAG00000007941	CHD6	85	78.458	ENSAPLG00000015592	CHD6	86	79.697	Anas_platyrhynchos
ENSVPAG00000007941	CHD6	83	72.629	ENSACAG00000006842	CHD6	82	73.984	Anolis_carolinensis
ENSVPAG00000007941	CHD6	93	89.596	ENSANAG00000037548	CHD6	98	88.037	Aotus_nancymaae
ENSVPAG00000007941	CHD6	71	72.650	ENSAMXG00000009576	chd6	71	72.650	Astyanax_mexicanus
ENSVPAG00000007941	CHD6	93	89.117	ENSBTAG00000005733	CHD6	92	89.100	Bos_taurus
ENSVPAG00000007941	CHD6	95	89.528	ENSCJAG00000017920	CHD6	98	87.850	Callithrix_jacchus
ENSVPAG00000007941	CHD6	93	92.417	ENSCAFG00000009236	CHD6	92	92.417	Canis_familiaris
ENSVPAG00000007941	CHD6	93	92.417	ENSCAFG00020012906	CHD6	99	91.264	Canis_lupus_dingo
ENSVPAG00000007941	CHD6	93	91.943	ENSCHIG00000017606	CHD6	92	91.943	Capra_hircus
ENSVPAG00000007941	CHD6	79	88.626	ENSTSYG00000014635	CHD6	90	91.485	Carlito_syrichta
ENSVPAG00000007941	CHD6	93	89.904	ENSCPOG00000015641	CHD6	92	89.904	Cavia_porcellus
ENSVPAG00000007941	CHD6	93	89.733	ENSCCAG00000036828	CHD6	98	88.037	Cebus_capucinus
ENSVPAG00000007941	CHD6	95	89.459	ENSCATG00000039248	CHD6	98	88.037	Cercocebus_atys
ENSVPAG00000007941	CHD6	93	89.904	ENSCLAG00000013743	CHD6	94	89.117	Chinchilla_lanigera
ENSVPAG00000007941	CHD6	95	89.938	ENSCSAG00000013997	CHD6	94	89.870	Chlorocebus_sabaeus
ENSVPAG00000007941	CHD6	86	82.067	ENSCHOG00000012647	CHD6	89	81.999	Choloepus_hoffmanni
ENSVPAG00000007941	CHD6	86	80.245	ENSCPBG00000019382	CHD6	93	80.360	Chrysemys_picta_bellii
ENSVPAG00000007941	CHD6	95	90.075	ENSCANG00000043435	CHD6	98	88.037	Colobus_angolensis_palliatus
ENSVPAG00000007941	CHD6	95	87.885	ENSCGRG00001002694	Chd6	94	87.817	Cricetulus_griseus_chok1gshd
ENSVPAG00000007941	CHD6	76	74.576	ENSDARG00000017244	chd6	73	74.576	Danio_rerio
ENSVPAG00000007941	CHD6	93	88.904	ENSDNOG00000004176	CHD6	92	88.835	Dasypus_novemcinctus
ENSVPAG00000007941	CHD6	95	89.524	ENSEASG00005023433	CHD6	93	92.126	Equus_asinus_asinus
ENSVPAG00000007941	CHD6	95	87.870	ENSECAG00000011761	CHD6	94	87.870	Equus_caballus
ENSVPAG00000007941	CHD6	71	67.019	ENSELUG00000012309	chd6	91	67.019	Esox_lucius
ENSVPAG00000007941	CHD6	96	90.486	ENSFCAG00000003572	CHD6	95	90.486	Felis_catus
ENSVPAG00000007941	CHD6	87	77.580	ENSFALG00000012563	CHD6	86	78.195	Ficedula_albicollis
ENSVPAG00000007941	CHD6	95	88.567	ENSFDAG00000013791	CHD6	94	88.499	Fukomys_damarensis
ENSVPAG00000007941	CHD6	67	64.189	ENSGMOG00000011715	chd6	77	64.260	Gadus_morhua
ENSVPAG00000007941	CHD6	71	64.964	ENSGACG00000000037	chd6	85	59.263	Gasterosteus_aculeatus
ENSVPAG00000007941	CHD6	95	89.802	ENSGGOG00000013123	CHD6	98	88.037	Gorilla_gorilla
ENSVPAG00000007941	CHD6	71	66.574	ENSHBUG00000014701	chd6	58	70.007	Haplochromis_burtoni
ENSVPAG00000007941	CHD6	93	88.638	ENSHGLG00000004548	CHD6	92	88.569	Heterocephalus_glaber_female
ENSVPAG00000007941	CHD6	93	88.638	ENSHGLG00100006401	CHD6	92	88.569	Heterocephalus_glaber_male
ENSVPAG00000007941	CHD6	74	78.125	ENSIPUG00000003692	chd6	69	78.125	Ictalurus_punctatus
ENSVPAG00000007941	CHD6	96	89.322	ENSSTOG00000013382	CHD6	94	89.254	Ictidomys_tridecemlineatus
ENSVPAG00000007941	CHD6	82	73.587	ENSLACG00000010881	CHD6	82	73.519	Latimeria_chalumnae
ENSVPAG00000007941	CHD6	69	72.522	ENSLOCG00000007386	chd6	79	68.603	Lepisosteus_oculatus
ENSVPAG00000007941	CHD6	95	89.596	ENSLAFG00000012144	CHD6	94	89.596	Loxodonta_africana
ENSVPAG00000007941	CHD6	95	90.007	ENSMFAG00000032830	CHD6	98	88.037	Macaca_fascicularis
ENSVPAG00000007941	CHD6	95	90.007	ENSMMUG00000020458	CHD6	98	88.037	Macaca_mulatta
ENSVPAG00000007941	CHD6	95	90.007	ENSMNEG00000040847	CHD6	98	88.037	Macaca_nemestrina
ENSVPAG00000007941	CHD6	95	90.069	ENSMLEG00000031965	CHD6	98	88.037	Mandrillus_leucophaeus
ENSVPAG00000007941	CHD6	66	68.146	ENSMAMG00000013111	chd6	56	69.422	Mastacembelus_armatus
ENSVPAG00000007941	CHD6	86	77.565	ENSMGAG00000001121	CHD6	86	78.796	Meleagris_gallopavo
ENSVPAG00000007941	CHD6	95	88.987	ENSMICG00000016641	CHD6	98	87.664	Microcebus_murinus
ENSVPAG00000007941	CHD6	84	86.580	ENSMODG00000000720	-	93	86.580	Monodelphis_domestica
ENSVPAG00000007941	CHD6	96	87.252	MGP_CAROLIEiJ_G0024604	Chd6	95	89.432	Mus_caroli
ENSVPAG00000007941	CHD6	95	87.132	ENSMUSG00000057133	Chd6	95	89.343	Mus_musculus
ENSVPAG00000007941	CHD6	95	87.269	MGP_PahariEiJ_G0026048	Chd6	95	89.698	Mus_pahari
ENSVPAG00000007941	CHD6	95	87.201	MGP_SPRETEiJ_G0025526	Chd6	95	89.432	Mus_spretus
ENSVPAG00000007941	CHD6	93	90.349	ENSMPUG00000017695	CHD6	92	90.349	Mustela_putorius_furo
ENSVPAG00000007941	CHD6	93	90.144	ENSMLUG00000016247	CHD6	92	90.144	Myotis_lucifugus
ENSVPAG00000007941	CHD6	70	74.107	ENSNBRG00000013839	chd6	76	67.244	Neolamprologus_brichardi
ENSVPAG00000007941	CHD6	95	87.286	ENSNLEG00000006496	CHD6	94	87.355	Nomascus_leucogenys
ENSVPAG00000007941	CHD6	95	85.489	ENSOPRG00000013376	-	94	85.421	Ochotona_princeps
ENSVPAG00000007941	CHD6	73	70.830	ENSONIG00000000393	chd6	76	70.830	Oreochromis_niloticus
ENSVPAG00000007941	CHD6	87	81.195	ENSOANG00000014347	CHD6	86	80.962	Ornithorhynchus_anatinus
ENSVPAG00000007941	CHD6	93	89.308	ENSOCUG00000012394	CHD6	94	89.239	Oryctolagus_cuniculus
ENSVPAG00000007941	CHD6	71	78.495	ENSORLG00020021891	chd6	93	81.967	Oryzias_latipes_hni
ENSVPAG00000007941	CHD6	93	89.232	ENSOGAG00000002427	CHD6	92	89.232	Otolemur_garnettii
ENSVPAG00000007941	CHD6	93	91.469	ENSOARG00000002597	CHD6	92	91.469	Ovis_aries
ENSVPAG00000007941	CHD6	96	90.418	ENSPPRG00000014756	CHD6	95	90.418	Panthera_pardus
ENSVPAG00000007941	CHD6	95	90.486	ENSPTIG00000011094	CHD6	94	90.486	Panthera_tigris_altaica
ENSVPAG00000007941	CHD6	95	89.802	ENSPTRG00000013504	CHD6	97	88.037	Pan_troglodytes
ENSVPAG00000007941	CHD6	95	90.007	ENSPANG00000025554	CHD6	98	87.850	Papio_anubis
ENSVPAG00000007941	CHD6	69	82.292	ENSPKIG00000005578	chd6	76	68.163	Paramormyrops_kingsleyae
ENSVPAG00000007941	CHD6	64	82.623	ENSPMGG00000014877	chd6	76	82.623	Periophthalmus_magnuspinnatus
ENSVPAG00000007941	CHD6	96	84.347	ENSPCIG00000028037	CHD6	94	84.347	Phascolarctos_cinereus
ENSVPAG00000007941	CHD6	69	64.050	ENSPLAG00000003128	chd6	58	68.417	Poecilia_latipinna
ENSVPAG00000007941	CHD6	66	66.231	ENSPREG00000022653	chd6	98	82.430	Poecilia_reticulata
ENSVPAG00000007941	CHD6	95	89.802	ENSPPYG00000011016	CHD6	94	89.733	Pongo_abelii
ENSVPAG00000007941	CHD6	93	90.995	ENSPCOG00000001089	CHD6	98	88.037	Propithecus_coquereli
ENSVPAG00000007941	CHD6	70	74.107	ENSPNYG00000022516	chd6	76	68.654	Pundamilia_nyererei
ENSVPAG00000007941	CHD6	70	75.424	ENSPNAG00000012825	chd6	70	75.424	Pygocentrus_nattereri
ENSVPAG00000007941	CHD6	95	86.768	ENSRNOG00000016744	Chd6	94	86.699	Rattus_norvegicus
ENSVPAG00000007941	CHD6	93	89.596	ENSSBOG00000022089	CHD6	97	88.037	Saimiri_boliviensis_boliviensis
ENSVPAG00000007941	CHD6	96	84.142	ENSSHAG00000017072	CHD6	94	84.142	Sarcophilus_harrisii
ENSVPAG00000007941	CHD6	72	71.681	ENSSFOG00015012920	chd6	71	71.681	Scleropages_formosus
ENSVPAG00000007941	CHD6	52	100.000	ENSSARG00000002615	-	54	100.000	Sorex_araneus
ENSVPAG00000007941	CHD6	93	90.995	ENSSSCG00000007360	CHD6	94	90.995	Sus_scrofa
ENSVPAG00000007941	CHD6	84	80.347	ENSTGUG00000003179	CHD6	86	81.558	Taeniopygia_guttata
ENSVPAG00000007941	CHD6	65	72.918	ENSTNIG00000017487	chd6	73	72.918	Tetraodon_nigroviridis
ENSVPAG00000007941	CHD6	93	89.573	ENSTTRG00000013438	CHD6	90	89.573	Tursiops_truncatus
ENSVPAG00000007941	CHD6	93	91.943	ENSUAMG00000024036	CHD6	92	91.943	Ursus_americanus
ENSVPAG00000007941	CHD6	93	91.943	ENSUMAG00000002017	CHD6	93	90.551	Ursus_maritimus
ENSVPAG00000007941	CHD6	93	92.417	ENSVVUG00000029164	CHD6	92	92.417	Vulpes_vulpes
ENSVPAG00000007941	CHD6	83	65.487	ENSXETG00000021445	chd6	82	65.943	Xenopus_tropicalis