EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000007963 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 32190 bases
Position: chrGeneScaffold_2613:81808-113997
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000007407	CPSF_A	PF03178.15	1.8e-35	1	3
ENSVPAP00000007407	CPSF_A	PF03178.15	1.8e-35	2	3
ENSVPAP00000007407	CPSF_A	PF03178.15	1.8e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000007963	DDB1-201	3351	-	ENSVPAP00000007407	1116 (aa)	-	UPI00018BD599

Gene Model

Click here to download ENSVPAG00000007963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000007963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000007963	DDB1	92	100.000	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSVPAG00000007963	DDB1	89	88.000	ENSAPOG00000005036	ddb1	94	86.566	Acanthochromis_polyacanthus
ENSVPAG00000007963	DDB1	92	100.000	ENSAMEG00000016518	DDB1	90	100.000	Ailuropoda_melanoleuca
ENSVPAG00000007963	DDB1	82	86.999	ENSACIG00000020624	ddb1	94	86.999	Amphilophus_citrinellus
ENSVPAG00000007963	DDB1	92	86.457	ENSAOCG00000003066	ddb1	90	86.457	Amphiprion_ocellaris
ENSVPAG00000007963	DDB1	92	86.566	ENSAPEG00000000092	ddb1	90	86.566	Amphiprion_percula
ENSVPAG00000007963	DDB1	86	86.891	ENSATEG00000020571	ddb1	94	82.486	Anabas_testudineus
ENSVPAG00000007963	DDB1	92	93.333	ENSAPLG00000007174	DDB1	90	93.333	Anas_platyrhynchos
ENSVPAG00000007963	DDB1	92	96.078	ENSACAG00000017758	DDB1	90	96.078	Anolis_carolinensis
ENSVPAG00000007963	DDB1	92	100.000	ENSANAG00000021878	DDB1	90	100.000	Aotus_nancymaae
ENSVPAG00000007963	DDB1	92	86.891	ENSACLG00000012401	ddb1	93	89.568	Astatotilapia_calliptera
ENSVPAG00000007963	DDB1	92	100.000	ENSBTAG00000021569	DDB1	84	100.000	Bos_taurus
ENSVPAG00000007963	DDB1	92	36.786	WBGene00010890	ddb-1	90	36.681	Caenorhabditis_elegans
ENSVPAG00000007963	DDB1	92	100.000	ENSCJAG00000019319	DDB1	90	100.000	Callithrix_jacchus
ENSVPAG00000007963	DDB1	92	100.000	ENSCAFG00000016264	DDB1	90	100.000	Canis_familiaris
ENSVPAG00000007963	DDB1	86	95.233	ENSCAFG00020012722	DDB1	89	95.233	Canis_lupus_dingo
ENSVPAG00000007963	DDB1	92	100.000	ENSCHIG00000014969	DDB1	90	100.000	Capra_hircus
ENSVPAG00000007963	DDB1	91	100.000	ENSTSYG00000008027	DDB1	90	100.000	Carlito_syrichta
ENSVPAG00000007963	DDB1	92	99.020	ENSCAPG00000010786	DDB1	92	99.020	Cavia_aperea
ENSVPAG00000007963	DDB1	92	99.020	ENSCPOG00000009956	DDB1	90	99.020	Cavia_porcellus
ENSVPAG00000007963	DDB1	92	100.000	ENSCCAG00000035883	DDB1	90	100.000	Cebus_capucinus
ENSVPAG00000007963	DDB1	92	95.098	ENSCATG00000044495	DDB1	90	95.098	Cercocebus_atys
ENSVPAG00000007963	DDB1	92	99.020	ENSCLAG00000004126	DDB1	90	99.020	Chinchilla_lanigera
ENSVPAG00000007963	DDB1	92	100.000	ENSCSAG00000006392	DDB1	90	100.000	Chlorocebus_sabaeus
ENSVPAG00000007963	DDB1	79	100.000	ENSCHOG00000011377	DDB1	79	100.000	Choloepus_hoffmanni
ENSVPAG00000007963	DDB1	92	97.059	ENSCPBG00000017728	DDB1	90	97.059	Chrysemys_picta_bellii
ENSVPAG00000007963	DDB1	92	58.289	ENSCING00000007437	-	90	58.182	Ciona_intestinalis
ENSVPAG00000007963	DDB1	87	57.143	ENSCSAVG00000004783	-	100	56.480	Ciona_savignyi
ENSVPAG00000007963	DDB1	92	100.000	ENSCANG00000019948	DDB1	90	100.000	Colobus_angolensis_palliatus
ENSVPAG00000007963	DDB1	92	100.000	ENSCGRG00001016599	Ddb1	90	100.000	Cricetulus_griseus_chok1gshd
ENSVPAG00000007963	DDB1	92	100.000	ENSCGRG00000013427	Ddb1	90	100.000	Cricetulus_griseus_crigri
ENSVPAG00000007963	DDB1	82	86.132	ENSCSEG00000012499	ddb1	94	84.640	Cynoglossus_semilaevis
ENSVPAG00000007963	DDB1	86	86.566	ENSCVAG00000019531	ddb1	89	86.566	Cyprinodon_variegatus
ENSVPAG00000007963	DDB1	92	84.466	ENSDARG00000074431	ddb1	90	84.466	Danio_rerio
ENSVPAG00000007963	DDB1	86	94.800	ENSDNOG00000014884	DDB1	87	94.800	Dasypus_novemcinctus
ENSVPAG00000007963	DDB1	81	93.396	ENSDORG00000000127	Ddb1	87	100.000	Dipodomys_ordii
ENSVPAG00000007963	DDB1	92	57.866	FBgn0260962	pic	90	57.605	Drosophila_melanogaster
ENSVPAG00000007963	DDB1	62	100.000	ENSETEG00000001053	-	61	100.000	Echinops_telfairi
ENSVPAG00000007963	DDB1	74	84.019	ENSEBUG00000014593	ddb1	91	84.262	Eptatretus_burgeri
ENSVPAG00000007963	DDB1	92	100.000	ENSEASG00005008184	DDB1	90	100.000	Equus_asinus_asinus
ENSVPAG00000007963	DDB1	92	100.000	ENSECAG00000012136	DDB1	90	100.000	Equus_caballus
ENSVPAG00000007963	DDB1	72	96.154	ENSEEUG00000003194	DDB1	70	96.154	Erinaceus_europaeus
ENSVPAG00000007963	DDB1	92	86.782	ENSELUG00000023868	ddb1	90	86.782	Esox_lucius
ENSVPAG00000007963	DDB1	92	100.000	ENSFCAG00000029716	DDB1	90	100.000	Felis_catus
ENSVPAG00000007963	DDB1	92	93.333	ENSFALG00000011981	DDB1	90	93.333	Ficedula_albicollis
ENSVPAG00000007963	DDB1	92	99.020	ENSFDAG00000005128	DDB1	90	99.020	Fukomys_damarensis
ENSVPAG00000007963	DDB1	82	98.246	ENSFHEG00000022133	ddb1	87	98.246	Fundulus_heteroclitus
ENSVPAG00000007963	DDB1	72	94.649	ENSGMOG00000019386	ddb1	84	94.649	Gadus_morhua
ENSVPAG00000007963	DDB1	92	97.059	ENSGALG00000042333	DDB1	90	97.059	Gallus_gallus
ENSVPAG00000007963	DDB1	86	86.349	ENSGAFG00000013142	ddb1	89	86.349	Gambusia_affinis
ENSVPAG00000007963	DDB1	87	86.457	ENSGACG00000017182	ddb1	89	86.457	Gasterosteus_aculeatus
ENSVPAG00000007963	DDB1	88	97.059	ENSGAGG00000014124	DDB1	91	97.059	Gopherus_agassizii
ENSVPAG00000007963	DDB1	92	100.000	ENSGGOG00000004052	DDB1	90	100.000	Gorilla_gorilla
ENSVPAG00000007963	DDB1	92	86.891	ENSHBUG00000008873	ddb1	91	86.374	Haplochromis_burtoni
ENSVPAG00000007963	DDB1	92	99.020	ENSHGLG00000018430	DDB1	90	99.020	Heterocephalus_glaber_female
ENSVPAG00000007963	DDB1	92	99.020	ENSHGLG00100014475	DDB1	90	99.020	Heterocephalus_glaber_male
ENSVPAG00000007963	DDB1	86	86.024	ENSHCOG00000018670	ddb1	88	86.024	Hippocampus_comes
ENSVPAG00000007963	DDB1	92	86.024	ENSIPUG00000005612	DDB1	90	86.024	Ictalurus_punctatus
ENSVPAG00000007963	DDB1	92	100.000	ENSSTOG00000007552	DDB1	90	100.000	Ictidomys_tridecemlineatus
ENSVPAG00000007963	DDB1	92	99.020	ENSJJAG00000017769	Ddb1	90	99.020	Jaculus_jaculus
ENSVPAG00000007963	DDB1	86	86.566	ENSKMAG00000002315	ddb1	89	86.566	Kryptolebias_marmoratus
ENSVPAG00000007963	DDB1	82	86.782	ENSLBEG00000017065	ddb1	95	86.782	Labrus_bergylta
ENSVPAG00000007963	DDB1	92	90.385	ENSLACG00000017611	DDB1	90	90.385	Latimeria_chalumnae
ENSVPAG00000007963	DDB1	83	81.905	ENSLOCG00000000012	ddb1	89	81.905	Lepisosteus_oculatus
ENSVPAG00000007963	DDB1	92	100.000	ENSLAFG00000011513	DDB1	90	100.000	Loxodonta_africana
ENSVPAG00000007963	DDB1	92	100.000	ENSMFAG00000042035	DDB1	90	100.000	Macaca_fascicularis
ENSVPAG00000007963	DDB1	91	100.000	ENSMMUG00000002691	DDB1	90	100.000	Macaca_mulatta
ENSVPAG00000007963	DDB1	92	100.000	ENSMNEG00000031559	DDB1	90	100.000	Macaca_nemestrina
ENSVPAG00000007963	DDB1	92	100.000	ENSMLEG00000044136	DDB1	90	100.000	Mandrillus_leucophaeus
ENSVPAG00000007963	DDB1	92	86.891	ENSMAMG00000014372	ddb1	90	86.891	Mastacembelus_armatus
ENSVPAG00000007963	DDB1	92	86.891	ENSMZEG00005013835	ddb1	90	86.891	Maylandia_zebra
ENSVPAG00000007963	DDB1	87	93.333	ENSMGAG00000004990	DDB1	91	93.333	Meleagris_gallopavo
ENSVPAG00000007963	DDB1	92	100.000	ENSMAUG00000012926	Ddb1	90	100.000	Mesocricetus_auratus
ENSVPAG00000007963	DDB1	92	100.000	ENSMICG00000013703	DDB1	90	100.000	Microcebus_murinus
ENSVPAG00000007963	DDB1	92	100.000	ENSMOCG00000020499	Ddb1	90	100.000	Microtus_ochrogaster
ENSVPAG00000007963	DDB1	82	86.891	ENSMMOG00000001758	ddb1	94	86.891	Mola_mola
ENSVPAG00000007963	DDB1	92	87.826	ENSMODG00000020353	DDB1	90	87.826	Monodelphis_domestica
ENSVPAG00000007963	DDB1	92	86.891	ENSMALG00000014071	ddb1	90	86.891	Monopterus_albus
ENSVPAG00000007963	DDB1	92	100.000	MGP_CAROLIEiJ_G0022695	Ddb1	90	100.000	Mus_caroli
ENSVPAG00000007963	DDB1	92	100.000	ENSMUSG00000024740	Ddb1	90	100.000	Mus_musculus
ENSVPAG00000007963	DDB1	92	100.000	MGP_PahariEiJ_G0014189	Ddb1	90	100.000	Mus_pahari
ENSVPAG00000007963	DDB1	92	100.000	MGP_SPRETEiJ_G0023609	Ddb1	90	100.000	Mus_spretus
ENSVPAG00000007963	DDB1	92	98.039	ENSMPUG00000014200	DDB1	92	98.039	Mustela_putorius_furo
ENSVPAG00000007963	DDB1	92	100.000	ENSMLUG00000013232	DDB1	90	100.000	Myotis_lucifugus
ENSVPAG00000007963	DDB1	92	100.000	ENSNGAG00000009384	Ddb1	90	100.000	Nannospalax_galili
ENSVPAG00000007963	DDB1	92	86.891	ENSNBRG00000019581	ddb1	90	86.891	Neolamprologus_brichardi
ENSVPAG00000007963	DDB1	92	95.098	ENSNLEG00000002022	DDB1	90	95.098	Nomascus_leucogenys
ENSVPAG00000007963	DDB1	82	100.000	ENSMEUG00000001099	DDB1	82	100.000	Notamacropus_eugenii
ENSVPAG00000007963	DDB1	84	100.000	ENSOPRG00000008254	DDB1	82	100.000	Ochotona_princeps
ENSVPAG00000007963	DDB1	92	99.020	ENSODEG00000002419	DDB1	90	99.020	Octodon_degus
ENSVPAG00000007963	DDB1	92	86.891	ENSONIG00000005804	ddb1	90	86.891	Oreochromis_niloticus
ENSVPAG00000007963	DDB1	84	97.059	ENSOANG00000004897	DDB1	91	97.059	Ornithorhynchus_anatinus
ENSVPAG00000007963	DDB1	92	99.020	ENSOCUG00000001667	DDB1	90	99.020	Oryctolagus_cuniculus
ENSVPAG00000007963	DDB1	87	86.132	ENSORLG00000001399	ddb1	87	86.132	Oryzias_latipes
ENSVPAG00000007963	DDB1	87	86.024	ENSORLG00020001277	ddb1	87	86.024	Oryzias_latipes_hni
ENSVPAG00000007963	DDB1	86	86.132	ENSORLG00015002080	ddb1	88	86.132	Oryzias_latipes_hsok
ENSVPAG00000007963	DDB1	88	86.674	ENSOMEG00000006181	ddb1	93	83.573	Oryzias_melastigma
ENSVPAG00000007963	DDB1	92	100.000	ENSOGAG00000016103	DDB1	90	100.000	Otolemur_garnettii
ENSVPAG00000007963	DDB1	90	100.000	ENSOARG00000011716	DDB1	88	100.000	Ovis_aries
ENSVPAG00000007963	DDB1	92	100.000	ENSPPAG00000035343	DDB1	90	100.000	Pan_paniscus
ENSVPAG00000007963	DDB1	92	100.000	ENSPPRG00000013300	DDB1	90	100.000	Panthera_pardus
ENSVPAG00000007963	DDB1	92	100.000	ENSPTIG00000006909	DDB1	90	100.000	Panthera_tigris_altaica
ENSVPAG00000007963	DDB1	92	100.000	ENSPTRG00000003737	DDB1	90	100.000	Pan_troglodytes
ENSVPAG00000007963	DDB1	92	100.000	ENSPANG00000000242	DDB1	90	100.000	Papio_anubis
ENSVPAG00000007963	DDB1	86	86.566	ENSPKIG00000019213	ddb1	84	86.566	Paramormyrops_kingsleyae
ENSVPAG00000007963	DDB1	92	97.059	ENSPSIG00000013275	DDB1	91	97.059	Pelodiscus_sinensis
ENSVPAG00000007963	DDB1	82	86.566	ENSPMGG00000021179	ddb1	94	86.566	Periophthalmus_magnuspinnatus
ENSVPAG00000007963	DDB1	92	100.000	ENSPEMG00000012241	Ddb1	90	100.000	Peromyscus_maniculatus_bairdii
ENSVPAG00000007963	DDB1	82	81.690	ENSPMAG00000008479	ddb1	91	81.690	Petromyzon_marinus
ENSVPAG00000007963	DDB1	92	100.000	ENSPCIG00000002643	DDB1	90	100.000	Phascolarctos_cinereus
ENSVPAG00000007963	DDB1	92	86.566	ENSPFOG00000002768	ddb1	90	86.566	Poecilia_formosa
ENSVPAG00000007963	DDB1	92	86.566	ENSPLAG00000017227	ddb1	90	86.566	Poecilia_latipinna
ENSVPAG00000007963	DDB1	92	86.566	ENSPMEG00000011398	ddb1	90	86.566	Poecilia_mexicana
ENSVPAG00000007963	DDB1	78	98.246	ENSPREG00000004440	ddb1	83	98.246	Poecilia_reticulata
ENSVPAG00000007963	DDB1	92	92.453	ENSPPYG00000003193	DDB1	90	92.453	Pongo_abelii
ENSVPAG00000007963	DDB1	76	100.000	ENSPCAG00000011040	DDB1	74	100.000	Procavia_capensis
ENSVPAG00000007963	DDB1	92	93.946	ENSPCOG00000015176	DDB1	90	93.946	Propithecus_coquereli
ENSVPAG00000007963	DDB1	92	100.000	ENSPVAG00000003847	DDB1	90	100.000	Pteropus_vampyrus
ENSVPAG00000007963	DDB1	86	86.457	ENSPNAG00000006635	ddb1	87	86.457	Pygocentrus_nattereri
ENSVPAG00000007963	DDB1	92	100.000	ENSRNOG00000020715	Ddb1	90	100.000	Rattus_norvegicus
ENSVPAG00000007963	DDB1	92	100.000	ENSRBIG00000033611	DDB1	90	100.000	Rhinopithecus_bieti
ENSVPAG00000007963	DDB1	92	100.000	ENSRROG00000041407	DDB1	90	100.000	Rhinopithecus_roxellana
ENSVPAG00000007963	DDB1	92	100.000	ENSSBOG00000019775	DDB1	90	100.000	Saimiri_boliviensis_boliviensis
ENSVPAG00000007963	DDB1	87	100.000	ENSSHAG00000011600	DDB1	91	100.000	Sarcophilus_harrisii
ENSVPAG00000007963	DDB1	86	86.891	ENSSFOG00015011151	ddb1	86	86.891	Scleropages_formosus
ENSVPAG00000007963	DDB1	92	86.275	ENSSMAG00000009495	ddb1	90	86.275	Scophthalmus_maximus
ENSVPAG00000007963	DDB1	92	86.782	ENSSDUG00000004642	ddb1	90	86.782	Seriola_dumerili
ENSVPAG00000007963	DDB1	92	86.782	ENSSLDG00000015804	ddb1	90	86.782	Seriola_lalandi_dorsalis
ENSVPAG00000007963	DDB1	56	100.000	ENSSARG00000003290	-	57	100.000	Sorex_araneus
ENSVPAG00000007963	DDB1	92	97.059	ENSSPUG00000019338	DDB1	90	97.059	Sphenodon_punctatus
ENSVPAG00000007963	DDB1	86	86.782	ENSSPAG00000009888	ddb1	94	83.983	Stegastes_partitus
ENSVPAG00000007963	DDB1	92	95.098	ENSSSCG00000013094	DDB1	90	95.098	Sus_scrofa
ENSVPAG00000007963	DDB1	92	93.283	ENSTGUG00000006414	DDB1	90	93.283	Taeniopygia_guttata
ENSVPAG00000007963	DDB1	86	85.374	ENSTRUG00000016682	ddb1	94	82.359	Takifugu_rubripes
ENSVPAG00000007963	DDB1	81	85.294	ENSTNIG00000009565	ddb1	90	85.294	Tetraodon_nigroviridis
ENSVPAG00000007963	DDB1	86	98.039	ENSTTRG00000011055	DDB1	86	98.039	Tursiops_truncatus
ENSVPAG00000007963	DDB1	86	95.233	ENSUAMG00000017793	DDB1	83	95.233	Ursus_americanus
ENSVPAG00000007963	DDB1	86	95.233	ENSUMAG00000011788	DDB1	87	95.233	Ursus_maritimus
ENSVPAG00000007963	DDB1	92	100.000	ENSVVUG00000004987	DDB1	90	100.000	Vulpes_vulpes
ENSVPAG00000007963	DDB1	92	95.098	ENSXETG00000008820	ddb1	90	95.098	Xenopus_tropicalis
ENSVPAG00000007963	DDB1	82	86.349	ENSXCOG00000013956	ddb1	94	86.349	Xiphophorus_couchianus
ENSVPAG00000007963	DDB1	86	86.349	ENSXMAG00000000022	ddb1	89	86.349	Xiphophorus_maculatus