EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSVPAG00000008041 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Vicugna_pacos
Status
putative
Strand
Plus strand
Length
55156 bases
Position
chrGeneScaffold_1056:143815-198970
Accession
2326
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVPAP00000007483CPSF73-100_CPF11718.81.3e-4211
ENSVPAP00000007483Beta-CaspPF10996.82e-3411
ENSVPAP00000007483Lactamase_BPF00753.274.1e-1911
ENSVPAP00000007483RMMBLPF07521.126.2e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVPAT00000008042CPSF3-2011902-ENSVPAP00000007483634 (aa)-UPI00018BD872
Gene Model
Click here to download ENSVPAG00000008041's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000008041's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVPAG00000008041CPSF310095.741ENSG00000119203CPSF3100100.000Homo_sapiens
ENSVPAG00000008041CPSF37796.920ENSAPOG00000012241CPSF38996.368Acanthochromis_polyacanthus
ENSVPAG00000008041CPSF310085.489ENSAPOG00000022087cpsf39982.285Acanthochromis_polyacanthus
ENSVPAG00000008041CPSF310096.057ENSAMEG00000008493CPSF39396.057Ailuropoda_melanoleuca
ENSVPAG00000008041CPSF39483.752ENSACIG00000009846cpsf39483.752Amphilophus_citrinellus
ENSVPAG00000008041CPSF39486.622ENSACIG00000023663CPSF39486.622Amphilophus_citrinellus
ENSVPAG00000008041CPSF310088.013ENSAOCG00000010077CPSF39288.013Amphiprion_ocellaris
ENSVPAG00000008041CPSF310085.489ENSAOCG00000022056cpsf39191.115Amphiprion_ocellaris
ENSVPAG00000008041CPSF310085.647ENSAPEG00000019526cpsf39585.647Amphiprion_percula
ENSVPAG00000008041CPSF310088.013ENSAPEG00000021167CPSF39488.013Amphiprion_percula
ENSVPAG00000008041CPSF310084.385ENSATEG00000014525CPSF39184.385Anabas_testudineus
ENSVPAG00000008041CPSF310085.962ENSATEG00000003959cpsf39285.962Anabas_testudineus
ENSVPAG00000008041CPSF310093.849ENSAPLG00000006941CPSF39393.849Anas_platyrhynchos
ENSVPAG00000008041CPSF39592.027ENSACAG00000001759CPSF39592.027Anolis_carolinensis
ENSVPAG00000008041CPSF310089.274ENSANAG00000031254CPSF39489.274Aotus_nancymaae
ENSVPAG00000008041CPSF39486.455ENSACLG00000018846CPSF39486.455Astatotilapia_calliptera
ENSVPAG00000008041CPSF310086.435ENSACLG00000014484cpsf39586.435Astatotilapia_calliptera
ENSVPAG00000008041CPSF310087.539ENSAMXG00000004786cpsf39287.539Astyanax_mexicanus
ENSVPAG00000008041CPSF310096.215ENSBTAG00000019735CPSF39396.215Bos_taurus
ENSVPAG00000008041CPSF39161.969WBGene00013460cpsf-38361.969Caenorhabditis_elegans
ENSVPAG00000008041CPSF310095.426ENSCJAG00000006276CPSF39395.426Callithrix_jacchus
ENSVPAG00000008041CPSF310096.057ENSCAFG00000003375CPSF38896.057Canis_familiaris
ENSVPAG00000008041CPSF391100.000ENSCAFG00020026799CPSF393100.000Canis_lupus_dingo
ENSVPAG00000008041CPSF310096.215ENSCHIG00000013973CPSF39396.215Capra_hircus
ENSVPAG00000008041CPSF310095.899ENSTSYG00000002967CPSF39395.899Carlito_syrichta
ENSVPAG00000008041CPSF310095.268ENSCAPG00000013851CPSF39595.268Cavia_aperea
ENSVPAG00000008041CPSF310095.268ENSCPOG00000011299CPSF39395.268Cavia_porcellus
ENSVPAG00000008041CPSF310095.584ENSCCAG00000036730CPSF39495.584Cebus_capucinus
ENSVPAG00000008041CPSF310092.913ENSCATG00000014770CPSF397100.000Cercocebus_atys
ENSVPAG00000008041CPSF310095.110ENSCLAG00000002727CPSF39395.110Chinchilla_lanigera
ENSVPAG00000008041CPSF310087.382ENSCSAG00000007125CPSF39287.382Chlorocebus_sabaeus
ENSVPAG00000008041CPSF379100.000ENSCHOG00000000180CPSF375100.000Choloepus_hoffmanni
ENSVPAG00000008041CPSF310094.164ENSCPBG00000014074CPSF39294.164Chrysemys_picta_bellii
ENSVPAG00000008041CPSF310068.750ENSCING00000007214-9268.750Ciona_intestinalis
ENSVPAG00000008041CPSF310084.639ENSCANG00000034435CPSF39284.639Colobus_angolensis_palliatus
ENSVPAG00000008041CPSF310095.584ENSCGRG00001013134Cpsf39395.584Cricetulus_griseus_chok1gshd
ENSVPAG00000008041CPSF310095.584ENSCGRG00000018319Cpsf39395.584Cricetulus_griseus_crigri
ENSVPAG00000008041CPSF310087.539ENSCSEG00000002021CPSF39587.134Cynoglossus_semilaevis
ENSVPAG00000008041CPSF310087.855ENSCVAG00000015067CPSF39287.855Cyprinodon_variegatus
ENSVPAG00000008041CPSF310088.644ENSDARG00000027649cpsf39288.644Danio_rerio
ENSVPAG00000008041CPSF310094.803ENSDNOG00000008940CPSF38894.803Dasypus_novemcinctus
ENSVPAG00000008041CPSF310095.268ENSDORG00000014263Cpsf39795.268Dipodomys_ordii
ENSVPAG00000008041CPSF39968.504FBgn0261065Cpsf739268.504Drosophila_melanogaster
ENSVPAG00000008041CPSF39784.502ENSETEG00000003893CPSF39484.502Echinops_telfairi
ENSVPAG00000008041CPSF39982.334ENSEBUG00000009018cpsf38982.334Eptatretus_burgeri
ENSVPAG00000008041CPSF310096.057ENSEASG00005003970CPSF39396.057Equus_asinus_asinus
ENSVPAG00000008041CPSF310096.057ENSECAG00000019911CPSF394100.000Equus_caballus
ENSVPAG00000008041CPSF310079.180ENSEEUG00000015422CPSF39379.180Erinaceus_europaeus
ENSVPAG00000008041CPSF310087.697ENSELUG00000013775cpsf39584.768Esox_lucius
ENSVPAG00000008041CPSF310096.215ENSFCAG00000007852CPSF39596.091Felis_catus
ENSVPAG00000008041CPSF39793.322ENSFALG00000006572CPSF39593.322Ficedula_albicollis
ENSVPAG00000008041CPSF310094.637ENSFDAG00000006317CPSF39294.637Fukomys_damarensis
ENSVPAG00000008041CPSF35966.844ENSFHEG00000012186CPSF39166.844Fundulus_heteroclitus
ENSVPAG00000008041CPSF310085.331ENSFHEG00000014774cpsf39285.331Fundulus_heteroclitus
ENSVPAG00000008041CPSF310086.593ENSGMOG00000003157cpsf39286.593Gadus_morhua
ENSVPAG00000008041CPSF310093.533ENSGALG00000016424CPSF39593.189Gallus_gallus
ENSVPAG00000008041CPSF310088.013ENSGAFG00000008016CPSF39288.013Gambusia_affinis
ENSVPAG00000008041CPSF39582.285ENSGAFG00000019449cpsf39582.285Gambusia_affinis
ENSVPAG00000008041CPSF36991.284ENSGAGG00000025583CPSF38791.284Gopherus_agassizii
ENSVPAG00000008041CPSF310093.374ENSGGOG00000001757CPSF39595.681Gorilla_gorilla
ENSVPAG00000008041CPSF310086.435ENSHBUG00000001188cpsf39286.435Haplochromis_burtoni
ENSVPAG00000008041CPSF35981.769ENSHBUG00000014332CPSF39281.769Haplochromis_burtoni
ENSVPAG00000008041CPSF310094.322ENSHGLG00000000666CPSF39294.322Heterocephalus_glaber_female
ENSVPAG00000008041CPSF310094.322ENSHGLG00100007765CPSF39294.322Heterocephalus_glaber_male
ENSVPAG00000008041CPSF310085.804ENSHCOG00000007251cpsf39285.804Hippocampus_comes
ENSVPAG00000008041CPSF310086.751ENSHCOG00000015957CPSF39186.751Hippocampus_comes
ENSVPAG00000008041CPSF310086.593ENSIPUG00000023488cpsf39286.593Ictalurus_punctatus
ENSVPAG00000008041CPSF310095.741ENSSTOG00000004476CPSF39395.741Ictidomys_tridecemlineatus
ENSVPAG00000008041CPSF310095.110ENSJJAG00000023415Cpsf39395.110Jaculus_jaculus
ENSVPAG00000008041CPSF310087.539ENSKMAG00000007317CPSF39287.539Kryptolebias_marmoratus
ENSVPAG00000008041CPSF310084.858ENSKMAG00000002806cpsf39284.858Kryptolebias_marmoratus
ENSVPAG00000008041CPSF310087.855ENSLBEG00000013492CPSF39687.855Labrus_bergylta
ENSVPAG00000008041CPSF35977.748ENSLBEG00000015018-9977.748Labrus_bergylta
ENSVPAG00000008041CPSF39186.678ENSLBEG00000020569cpsf38486.678Labrus_bergylta
ENSVPAG00000008041CPSF310082.334ENSLACG00000008308CPSF39282.334Latimeria_chalumnae
ENSVPAG00000008041CPSF310088.050ENSLOCG00000016823cpsf39288.050Lepisosteus_oculatus
ENSVPAG00000008041CPSF310095.899ENSLAFG00000009467CPSF39395.899Loxodonta_africana
ENSVPAG00000008041CPSF310095.741ENSMFAG00000001339CPSF39595.595Macaca_fascicularis
ENSVPAG00000008041CPSF39795.603ENSMMUG00000018038CPSF39595.603Macaca_mulatta
ENSVPAG00000008041CPSF310082.019ENSMNEG00000039447CPSF39282.019Macaca_nemestrina
ENSVPAG00000008041CPSF310095.899ENSMLEG00000026825CPSF39395.899Mandrillus_leucophaeus
ENSVPAG00000008041CPSF310085.804ENSMAMG00000003076cpsf39288.725Mastacembelus_armatus
ENSVPAG00000008041CPSF39485.284ENSMAMG00000008835CPSF39485.284Mastacembelus_armatus
ENSVPAG00000008041CPSF310088.644ENSMZEG00005006258CPSF39288.644Maylandia_zebra
ENSVPAG00000008041CPSF310086.435ENSMZEG00005014358cpsf39286.435Maylandia_zebra
ENSVPAG00000008041CPSF310093.533ENSMGAG00000013995CPSF39593.533Meleagris_gallopavo
ENSVPAG00000008041CPSF35490.671ENSMAUG00000000166Cpsf39190.671Mesocricetus_auratus
ENSVPAG00000008041CPSF310089.748ENSMICG00000002363CPSF39589.127Microcebus_murinus
ENSVPAG00000008041CPSF39199.481ENSMOCG00000020067Cpsf38999.481Microtus_ochrogaster
ENSVPAG00000008041CPSF37477.857ENSMMOG00000011923CPSF37877.857Mola_mola
ENSVPAG00000008041CPSF39783.062ENSMMOG00000018212CPSF39483.062Mola_mola
ENSVPAG00000008041CPSF310093.448ENSMODG00000014703CPSF39393.448Monodelphis_domestica
ENSVPAG00000008041CPSF310086.435ENSMALG00000016416cpsf39286.435Monopterus_albus
ENSVPAG00000008041CPSF39385.666ENSMALG00000011474CPSF39685.666Monopterus_albus
ENSVPAG00000008041CPSF310095.110MGP_CAROLIEiJ_G0017640Cpsf39395.110Mus_caroli
ENSVPAG00000008041CPSF310095.110ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSVPAG00000008041CPSF310094.953MGP_PahariEiJ_G0029397Cpsf39394.953Mus_pahari
ENSVPAG00000008041CPSF310095.110MGP_SPRETEiJ_G0018481Cpsf39395.110Mus_spretus
ENSVPAG00000008041CPSF310095.899ENSMPUG00000013213CPSF39395.899Mustela_putorius_furo
ENSVPAG00000008041CPSF310095.276ENSMLUG00000010636CPSF39395.276Myotis_lucifugus
ENSVPAG00000008041CPSF310095.268ENSNGAG00000019836Cpsf39395.268Nannospalax_galili
ENSVPAG00000008041CPSF39486.455ENSNBRG00000010525CPSF39486.455Neolamprologus_brichardi
ENSVPAG00000008041CPSF310085.962ENSNBRG00000004770cpsf39285.962Neolamprologus_brichardi
ENSVPAG00000008041CPSF310095.741ENSNLEG00000013359CPSF39595.603Nomascus_leucogenys
ENSVPAG00000008041CPSF38868.223ENSMEUG00000013117-8168.223Notamacropus_eugenii
ENSVPAG00000008041CPSF310086.120ENSOPRG00000008902CPSF39386.120Ochotona_princeps
ENSVPAG00000008041CPSF310094.479ENSODEG00000003129CPSF39394.479Octodon_degus
ENSVPAG00000008041CPSF310086.435ENSONIG00000018812cpsf39286.435Oreochromis_niloticus
ENSVPAG00000008041CPSF38493.974ENSOANG00000008577CPSF39493.974Ornithorhynchus_anatinus
ENSVPAG00000008041CPSF310095.584ENSOCUG00000003728CPSF39395.584Oryctolagus_cuniculus
ENSVPAG00000008041CPSF310084.227ENSORLG00000018854cpsf39284.227Oryzias_latipes
ENSVPAG00000008041CPSF310084.069ENSORLG00020013331cpsf39284.069Oryzias_latipes_hni
ENSVPAG00000008041CPSF310084.227ENSORLG00015011017cpsf39284.227Oryzias_latipes_hsok
ENSVPAG00000008041CPSF310084.069ENSOMEG00000010647cpsf38884.069Oryzias_melastigma
ENSVPAG00000008041CPSF310084.858ENSOGAG00000001680CPSF39384.858Otolemur_garnettii
ENSVPAG00000008041CPSF310096.215ENSOARG00000015073CPSF39396.215Ovis_aries
ENSVPAG00000008041CPSF310095.899ENSPPAG00000042457CPSF39693.469Pan_paniscus
ENSVPAG00000008041CPSF310096.215ENSPPRG00000016790CPSF39596.091Panthera_pardus
ENSVPAG00000008041CPSF310096.215ENSPTIG00000003920CPSF39596.013Panthera_tigris_altaica
ENSVPAG00000008041CPSF310095.899ENSPTRG00000011638CPSF39693.469Pan_troglodytes
ENSVPAG00000008041CPSF310095.584ENSPANG00000016798CPSF39593.621Papio_anubis
ENSVPAG00000008041CPSF310088.801ENSPKIG00000023646cpsf39588.436Paramormyrops_kingsleyae
ENSVPAG00000008041CPSF310093.691ENSPSIG00000016144CPSF39393.691Pelodiscus_sinensis
ENSVPAG00000008041CPSF38588.725ENSPMGG00000006141-9388.725Periophthalmus_magnuspinnatus
ENSVPAG00000008041CPSF35977.748ENSPMGG00000015311CPSF39277.748Periophthalmus_magnuspinnatus
ENSVPAG00000008041CPSF310094.795ENSPEMG00000017668Cpsf39394.795Peromyscus_maniculatus_bairdii
ENSVPAG00000008041CPSF38290.595ENSPMAG00000004841cpsf39690.595Petromyzon_marinus
ENSVPAG00000008041CPSF310094.795ENSPCIG00000009823CPSF39594.795Phascolarctos_cinereus
ENSVPAG00000008041CPSF310087.697ENSPFOG00000010418-9287.697Poecilia_formosa
ENSVPAG00000008041CPSF310085.174ENSPFOG00000015922cpsf39285.174Poecilia_formosa
ENSVPAG00000008041CPSF35980.429ENSPLAG00000021300-9280.429Poecilia_latipinna
ENSVPAG00000008041CPSF310085.174ENSPLAG00000000882cpsf39285.174Poecilia_latipinna
ENSVPAG00000008041CPSF310085.331ENSPMEG00000018309cpsf39285.331Poecilia_mexicana
ENSVPAG00000008041CPSF39582.285ENSPREG00000014875cpsf39582.285Poecilia_reticulata
ENSVPAG00000008041CPSF310082.677ENSPREG00000004482CPSF39182.677Poecilia_reticulata
ENSVPAG00000008041CPSF310091.009ENSPPYG00000012666CPSF39291.009Pongo_abelii
ENSVPAG00000008041CPSF38393.750ENSPCAG00000015042CPSF38193.750Procavia_capensis
ENSVPAG00000008041CPSF38791.698ENSPCOG00000023016CPSF38991.698Propithecus_coquereli
ENSVPAG00000008041CPSF310095.899ENSPVAG00000005324CPSF39395.899Pteropus_vampyrus
ENSVPAG00000008041CPSF310086.435ENSPNYG00000004405cpsf39286.435Pundamilia_nyererei
ENSVPAG00000008041CPSF38591.513ENSPNYG00000021047CPSF39091.513Pundamilia_nyererei
ENSVPAG00000008041CPSF310087.224ENSPNAG00000023060cpsf39287.224Pygocentrus_nattereri
ENSVPAG00000008041CPSF310095.110ENSRNOG00000052418Cpsf39395.110Rattus_norvegicus
ENSVPAG00000008041CPSF310089.432ENSRBIG00000041615CPSF39490.879Rhinopithecus_bieti
ENSVPAG00000008041CPSF310095.899ENSRROG00000033792CPSF39395.899Rhinopithecus_roxellana
ENSVPAG00000008041CPSF39143.598YLR277CYSH18443.598Saccharomyces_cerevisiae
ENSVPAG00000008041CPSF310091.066ENSSBOG00000027263CPSF39291.066Saimiri_boliviensis_boliviensis
ENSVPAG00000008041CPSF310094.795ENSSHAG00000007024CPSF39394.795Sarcophilus_harrisii
ENSVPAG00000008041CPSF310088.644ENSSFOG00015002108cpsf39588.040Scleropages_formosus
ENSVPAG00000008041CPSF310087.697ENSSMAG00000020534CPSF39387.697Scophthalmus_maximus
ENSVPAG00000008041CPSF310086.278ENSSDUG00000002828cpsf39086.278Seriola_dumerili
ENSVPAG00000008041CPSF310088.170ENSSDUG00000018498CPSF39288.170Seriola_dumerili
ENSVPAG00000008041CPSF310088.170ENSSLDG00000005234CPSF39585.786Seriola_lalandi_dorsalis
ENSVPAG00000008041CPSF310086.120ENSSLDG00000008469cpsf38991.115Seriola_lalandi_dorsalis
ENSVPAG00000008041CPSF38793.750ENSSARG00000005186CPSF38093.750Sorex_araneus
ENSVPAG00000008041CPSF310091.066ENSSPUG00000015525CPSF39391.066Sphenodon_punctatus
ENSVPAG00000008041CPSF310085.647ENSSPAG00000018579cpsf39285.647Stegastes_partitus
ENSVPAG00000008041CPSF310087.855ENSSPAG00000002906CPSF39585.619Stegastes_partitus
ENSVPAG00000008041CPSF310095.899ENSSSCG00000020799CPSF39395.899Sus_scrofa
ENSVPAG00000008041CPSF310093.533ENSTGUG00000013016CPSF39393.533Taeniopygia_guttata
ENSVPAG00000008041CPSF310085.331ENSTRUG00000007030cpsf39185.331Takifugu_rubripes
ENSVPAG00000008041CPSF35972.386ENSTRUG00000013905CPSF39172.386Takifugu_rubripes
ENSVPAG00000008041CPSF37293.391ENSTBEG00000002707CPSF37093.391Tupaia_belangeri
ENSVPAG00000008041CPSF38784.314ENSTTRG00000000861CPSF38084.314Tursiops_truncatus
ENSVPAG00000008041CPSF310096.057ENSUAMG00000007535CPSF39196.057Ursus_americanus
ENSVPAG00000008041CPSF39795.928ENSUMAG00000003676CPSF394100.000Ursus_maritimus
ENSVPAG00000008041CPSF310096.057ENSVVUG00000002194CPSF39396.057Vulpes_vulpes
ENSVPAG00000008041CPSF310088.959ENSXETG00000008263cpsf39288.959Xenopus_tropicalis
ENSVPAG00000008041CPSF310085.331ENSXCOG00000019695cpsf39285.331Xiphophorus_couchianus
ENSVPAG00000008041CPSF35478.529ENSXCOG00000000957-7978.529Xiphophorus_couchianus
ENSVPAG00000008041CPSF310085.331ENSXMAG00000009784cpsf39584.853Xiphophorus_maculatus
ENSVPAG00000008041CPSF310087.855ENSXMAG00000027291CPSF39287.855Xiphophorus_maculatus

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