EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000008152 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 37626 bases
Position: chrGeneScaffold_2985:74061-111686
Accession: 10771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000007587	RRM_1	PF00076.22	1.1e-39	1	2
ENSVPAP00000007587	RRM_1	PF00076.22	1.1e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000008152	SF3B4-201	1239	-	ENSVPAP00000007587	412 (aa)	-	UPI0000E2F097

Gene Model

Click here to download ENSVPAG00000008152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000008152's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000008152	SF3B4	72	39.844	ENSVPAG00000003865	PABPC1	57	39.844

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000008152	SF3B4	100	99.757	ENSG00000143368	SF3B4	100	100.000	Homo_sapiens
ENSVPAG00000008152	SF3B4	55	96.491	ENSAPOG00000017647	sf3b4	74	79.805	Acanthochromis_polyacanthus
ENSVPAG00000008152	SF3B4	100	100.000	ENSAMEG00000010073	SF3B4	97	100.000	Ailuropoda_melanoleuca
ENSVPAG00000008152	SF3B4	55	96.491	ENSAOCG00000019801	sf3b4	74	79.805	Amphiprion_ocellaris
ENSVPAG00000008152	SF3B4	55	96.491	ENSAPEG00000010365	sf3b4	74	79.805	Amphiprion_percula
ENSVPAG00000008152	SF3B4	55	96.053	ENSATEG00000012844	sf3b4	57	96.053	Anabas_testudineus
ENSVPAG00000008152	SF3B4	61	96.016	ENSACAG00000010019	SF3B4	88	89.757	Anolis_carolinensis
ENSVPAG00000008152	SF3B4	100	99.757	ENSANAG00000031025	SF3B4	97	99.757	Aotus_nancymaae
ENSVPAG00000008152	SF3B4	55	95.614	ENSACLG00000014260	sf3b4	73	80.782	Astatotilapia_calliptera
ENSVPAG00000008152	SF3B4	55	96.053	ENSAMXG00000008282	sf3b4	57	96.053	Astyanax_mexicanus
ENSVPAG00000008152	SF3B4	100	100.000	ENSBTAG00000012495	SF3B4	97	100.000	Bos_taurus
ENSVPAG00000008152	SF3B4	93	96.615	ENSBTAG00000012793	-	93	96.615	Bos_taurus
ENSVPAG00000008152	SF3B4	89	82.131	ENSCJAG00000042351	SF3B4	85	82.131	Callithrix_jacchus
ENSVPAG00000008152	SF3B4	100	99.515	ENSCAFG00000011617	SF3B4	97	99.515	Canis_familiaris
ENSVPAG00000008152	SF3B4	100	99.515	ENSCAFG00020019775	SF3B4	97	99.515	Canis_lupus_dingo
ENSVPAG00000008152	SF3B4	100	100.000	ENSCHIG00000025663	-	97	100.000	Capra_hircus
ENSVPAG00000008152	SF3B4	100	99.757	ENSTSYG00000009295	SF3B4	97	99.757	Carlito_syrichta
ENSVPAG00000008152	SF3B4	100	99.757	ENSCPOG00000008267	SF3B4	97	99.757	Cavia_porcellus
ENSVPAG00000008152	SF3B4	100	86.637	ENSCCAG00000021751	-	66	92.628	Cebus_capucinus
ENSVPAG00000008152	SF3B4	97	85.572	ENSCCAG00000019823	-	71	91.362	Cebus_capucinus
ENSVPAG00000008152	SF3B4	100	99.757	ENSCATG00000033114	SF3B4	97	99.757	Cercocebus_atys
ENSVPAG00000008152	SF3B4	100	99.757	ENSCLAG00000015851	SF3B4	97	99.757	Chinchilla_lanigera
ENSVPAG00000008152	SF3B4	100	99.757	ENSCSAG00000018129	SF3B4	97	99.757	Chlorocebus_sabaeus
ENSVPAG00000008152	SF3B4	99	85.680	ENSCPBG00000008041	SF3B4	88	90.591	Chrysemys_picta_bellii
ENSVPAG00000008152	SF3B4	50	89.268	ENSCING00000002337	-	54	89.950	Ciona_intestinalis
ENSVPAG00000008152	SF3B4	100	99.757	ENSCANG00000035579	SF3B4	97	99.757	Colobus_angolensis_palliatus
ENSVPAG00000008152	SF3B4	100	99.757	ENSCGRG00001003590	Sf3b4	97	99.757	Cricetulus_griseus_chok1gshd
ENSVPAG00000008152	SF3B4	100	99.757	ENSCGRG00000016914	Sf3b4	97	99.757	Cricetulus_griseus_crigri
ENSVPAG00000008152	SF3B4	55	96.053	ENSDARG00000018574	sf3b4	74	78.502	Danio_rerio
ENSVPAG00000008152	SF3B4	99	98.054	ENSDNOG00000048908	-	98	98.054	Dasypus_novemcinctus
ENSVPAG00000008152	SF3B4	100	100.000	ENSDORG00000016366	Sf3b4	97	100.000	Dipodomys_ordii
ENSVPAG00000008152	SF3B4	76	92.628	ENSETEG00000008963	SF3B4	74	92.628	Echinops_telfairi
ENSVPAG00000008152	SF3B4	100	100.000	ENSEASG00005001477	SF3B4	97	100.000	Equus_asinus_asinus
ENSVPAG00000008152	SF3B4	100	100.000	ENSECAG00000024737	SF3B4	97	100.000	Equus_caballus
ENSVPAG00000008152	SF3B4	100	100.000	ENSFCAG00000010106	SF3B4	97	100.000	Felis_catus
ENSVPAG00000008152	SF3B4	100	99.757	ENSFDAG00000009286	SF3B4	97	99.757	Fukomys_damarensis
ENSVPAG00000008152	SF3B4	53	96.789	ENSGMOG00000002519	sf3b4	63	97.222	Gadus_morhua
ENSVPAG00000008152	SF3B4	99	89.051	ENSGALG00000013352	SF3B4	88	89.488	Gallus_gallus
ENSVPAG00000008152	SF3B4	61	92.095	ENSGAFG00000010181	sf3b4	55	97.685	Gambusia_affinis
ENSVPAG00000008152	SF3B4	99	85.437	ENSGAGG00000025055	SF3B4	77	90.323	Gopherus_agassizii
ENSVPAG00000008152	SF3B4	100	73.301	ENSGGOG00000038845	-	51	89.899	Gorilla_gorilla
ENSVPAG00000008152	SF3B4	100	99.757	ENSGGOG00000004761	SF3B4	97	99.757	Gorilla_gorilla
ENSVPAG00000008152	SF3B4	55	95.614	ENSHBUG00000002028	sf3b4	73	80.782	Haplochromis_burtoni
ENSVPAG00000008152	SF3B4	100	99.757	ENSHGLG00000012360	SF3B4	97	99.757	Heterocephalus_glaber_female
ENSVPAG00000008152	SF3B4	100	98.544	ENSHGLG00100008533	SF3B4	97	98.544	Heterocephalus_glaber_male
ENSVPAG00000008152	SF3B4	55	96.491	ENSIPUG00000012242	Sf3b4	57	96.491	Ictalurus_punctatus
ENSVPAG00000008152	SF3B4	100	100.000	ENSSTOG00000000684	-	97	100.000	Ictidomys_tridecemlineatus
ENSVPAG00000008152	SF3B4	75	84.483	ENSJJAG00000022500	Sf3b4	92	84.483	Jaculus_jaculus
ENSVPAG00000008152	SF3B4	55	96.000	ENSKMAG00000008154	sf3b4	55	98.148	Kryptolebias_marmoratus
ENSVPAG00000008152	SF3B4	54	97.285	ENSLBEG00000026818	sf3b4	54	98.148	Labrus_bergylta
ENSVPAG00000008152	SF3B4	56	95.238	ENSLACG00000004436	SF3B4	84	85.065	Latimeria_chalumnae
ENSVPAG00000008152	SF3B4	56	95.671	ENSLOCG00000009048	sf3b4	72	85.016	Lepisosteus_oculatus
ENSVPAG00000008152	SF3B4	100	99.516	ENSLAFG00000008531	SF3B4	97	99.516	Loxodonta_africana
ENSVPAG00000008152	SF3B4	100	99.757	ENSMFAG00000042395	SF3B4	97	99.757	Macaca_fascicularis
ENSVPAG00000008152	SF3B4	95	71.066	ENSMFAG00000039067	-	57	80.930	Macaca_fascicularis
ENSVPAG00000008152	SF3B4	100	99.757	ENSMMUG00000007256	SF3B4	97	99.757	Macaca_mulatta
ENSVPAG00000008152	SF3B4	100	99.757	ENSMNEG00000031839	SF3B4	97	99.757	Macaca_nemestrina
ENSVPAG00000008152	SF3B4	95	70.558	ENSMNEG00000031526	-	57	80.465	Macaca_nemestrina
ENSVPAG00000008152	SF3B4	100	99.757	ENSMLEG00000038667	SF3B4	97	99.757	Mandrillus_leucophaeus
ENSVPAG00000008152	SF3B4	55	96.930	ENSMAMG00000014692	sf3b4	57	96.930	Mastacembelus_armatus
ENSVPAG00000008152	SF3B4	55	95.614	ENSMZEG00005026741	sf3b4	73	80.782	Maylandia_zebra
ENSVPAG00000008152	SF3B4	99	87.591	ENSMGAG00000000653	SF3B4	88	89.218	Meleagris_gallopavo
ENSVPAG00000008152	SF3B4	100	99.757	ENSMAUG00000015266	Sf3b4	97	99.757	Mesocricetus_auratus
ENSVPAG00000008152	SF3B4	100	100.000	ENSMICG00000044961	SF3B4	97	100.000	Microcebus_murinus
ENSVPAG00000008152	SF3B4	100	99.757	ENSMOCG00000013658	-	97	99.757	Microtus_ochrogaster
ENSVPAG00000008152	SF3B4	100	94.660	ENSMOCG00000014155	-	99	94.660	Microtus_ochrogaster
ENSVPAG00000008152	SF3B4	53	97.706	ENSMMOG00000018032	sf3b4	55	97.685	Mola_mola
ENSVPAG00000008152	SF3B4	100	99.272	ENSMODG00000018767	SF3B4	97	99.272	Monodelphis_domestica
ENSVPAG00000008152	SF3B4	52	97.674	ENSMALG00000006174	sf3b4	54	97.222	Monopterus_albus
ENSVPAG00000008152	SF3B4	100	99.515	MGP_CAROLIEiJ_G0025365	Sf3b4	97	99.515	Mus_caroli
ENSVPAG00000008152	SF3B4	100	99.757	ENSMUSG00000068856	Sf3b4	97	99.757	Mus_musculus
ENSVPAG00000008152	SF3B4	100	99.757	MGP_PahariEiJ_G0026809	Sf3b4	97	99.757	Mus_pahari
ENSVPAG00000008152	SF3B4	100	99.757	MGP_SPRETEiJ_G0026309	Sf3b4	97	99.757	Mus_spretus
ENSVPAG00000008152	SF3B4	100	100.000	ENSMPUG00000005563	SF3B4	97	100.000	Mustela_putorius_furo
ENSVPAG00000008152	SF3B4	100	99.757	ENSMLUG00000010789	SF3B4	97	99.757	Myotis_lucifugus
ENSVPAG00000008152	SF3B4	100	99.515	ENSNGAG00000016337	Sf3b4	97	99.515	Nannospalax_galili
ENSVPAG00000008152	SF3B4	55	96.053	ENSNBRG00000013865	sf3b4	73	81.107	Neolamprologus_brichardi
ENSVPAG00000008152	SF3B4	100	76.456	ENSNLEG00000000537	-	79	84.936	Nomascus_leucogenys
ENSVPAG00000008152	SF3B4	100	69.231	ENSNLEG00000009693	-	97	69.231	Nomascus_leucogenys
ENSVPAG00000008152	SF3B4	80	100.000	ENSMEUG00000003272	SF3B4	80	100.000	Notamacropus_eugenii
ENSVPAG00000008152	SF3B4	99	97.311	ENSOPRG00000010808	SF3B4	97	97.311	Ochotona_princeps
ENSVPAG00000008152	SF3B4	74	87.213	ENSODEG00000003597	-	76	87.213	Octodon_degus
ENSVPAG00000008152	SF3B4	55	95.111	ENSONIG00000002730	sf3b4	54	97.685	Oreochromis_niloticus
ENSVPAG00000008152	SF3B4	100	100.000	ENSOCUG00000004614	SF3B4	97	100.000	Oryctolagus_cuniculus
ENSVPAG00000008152	SF3B4	53	96.818	ENSORLG00000003062	sf3b4	56	97.685	Oryzias_latipes
ENSVPAG00000008152	SF3B4	100	100.000	ENSOGAG00000006265	SF3B4	97	100.000	Otolemur_garnettii
ENSVPAG00000008152	SF3B4	100	100.000	ENSOARG00000020718	-	97	100.000	Ovis_aries
ENSVPAG00000008152	SF3B4	86	78.652	ENSOARG00000007368	-	75	79.487	Ovis_aries
ENSVPAG00000008152	SF3B4	100	82.039	ENSPPAG00000030024	-	75	83.013	Pan_paniscus
ENSVPAG00000008152	SF3B4	100	99.757	ENSPPAG00000040904	SF3B4	97	99.757	Pan_paniscus
ENSVPAG00000008152	SF3B4	100	100.000	ENSPPRG00000007384	SF3B4	97	100.000	Panthera_pardus
ENSVPAG00000008152	SF3B4	100	99.515	ENSPTIG00000014530	SF3B4	97	99.515	Panthera_tigris_altaica
ENSVPAG00000008152	SF3B4	100	79.369	ENSPTRG00000049727	-	56	90.625	Pan_troglodytes
ENSVPAG00000008152	SF3B4	100	99.757	ENSPTRG00000001243	SF3B4	97	99.757	Pan_troglodytes
ENSVPAG00000008152	SF3B4	100	99.757	ENSPANG00000005126	SF3B4	97	99.757	Papio_anubis
ENSVPAG00000008152	SF3B4	54	97.285	ENSPKIG00000020669	sf3b4	57	98.148	Paramormyrops_kingsleyae
ENSVPAG00000008152	SF3B4	68	75.714	ENSPSIG00000009565	SF3B4	68	98.378	Pelodiscus_sinensis
ENSVPAG00000008152	SF3B4	100	99.757	ENSPEMG00000017568	Sf3b4	97	99.757	Peromyscus_maniculatus_bairdii
ENSVPAG00000008152	SF3B4	100	99.272	ENSPCIG00000008765	SF3B4	97	99.272	Phascolarctos_cinereus
ENSVPAG00000008152	SF3B4	63	90.038	ENSPFOG00000005754	sf3b4	55	97.222	Poecilia_formosa
ENSVPAG00000008152	SF3B4	63	90.038	ENSPLAG00000001401	sf3b4	60	97.222	Poecilia_latipinna
ENSVPAG00000008152	SF3B4	63	90.038	ENSPREG00000011076	sf3b4	54	97.685	Poecilia_reticulata
ENSVPAG00000008152	SF3B4	62	98.980	ENSPCAG00000000392	SF3B4	60	98.980	Procavia_capensis
ENSVPAG00000008152	SF3B4	100	100.000	ENSPCOG00000015399	SF3B4	97	100.000	Propithecus_coquereli
ENSVPAG00000008152	SF3B4	100	100.000	ENSPVAG00000014171	SF3B4	97	100.000	Pteropus_vampyrus
ENSVPAG00000008152	SF3B4	55	95.614	ENSPNYG00000012700	sf3b4	73	80.782	Pundamilia_nyererei
ENSVPAG00000008152	SF3B4	55	96.491	ENSPNAG00000000686	sf3b4	58	96.491	Pygocentrus_nattereri
ENSVPAG00000008152	SF3B4	100	99.757	ENSRNOG00000021181	Sf3b4	97	99.757	Rattus_norvegicus
ENSVPAG00000008152	SF3B4	100	99.757	ENSRBIG00000043392	SF3B4	97	99.757	Rhinopithecus_bieti
ENSVPAG00000008152	SF3B4	93	71.244	ENSRROG00000028213	-	90	67.385	Rhinopithecus_roxellana
ENSVPAG00000008152	SF3B4	100	99.757	ENSRROG00000029366	SF3B4	97	99.757	Rhinopithecus_roxellana
ENSVPAG00000008152	SF3B4	100	99.515	ENSSBOG00000012310	-	97	99.515	Saimiri_boliviensis_boliviensis
ENSVPAG00000008152	SF3B4	100	73.058	ENSSBOG00000025174	-	71	80.064	Saimiri_boliviensis_boliviensis
ENSVPAG00000008152	SF3B4	100	97.573	ENSSHAG00000004043	SF3B4	100	98.950	Sarcophilus_harrisii
ENSVPAG00000008152	SF3B4	55	96.444	ENSSFOG00015008864	sf3b4	53	98.148	Scleropages_formosus
ENSVPAG00000008152	SF3B4	55	96.491	ENSSMAG00000006837	sf3b4	57	96.491	Scophthalmus_maximus
ENSVPAG00000008152	SF3B4	55	96.930	ENSSDUG00000012064	sf3b4	57	96.930	Seriola_dumerili
ENSVPAG00000008152	SF3B4	55	96.930	ENSSLDG00000014226	sf3b4	57	96.930	Seriola_lalandi_dorsalis
ENSVPAG00000008152	SF3B4	71	94.850	ENSSPUG00000001028	SF3B4	54	98.611	Sphenodon_punctatus
ENSVPAG00000008152	SF3B4	55	97.368	ENSSPAG00000019219	sf3b4	57	97.368	Stegastes_partitus
ENSVPAG00000008152	SF3B4	85	65.714	ENSSSCG00000039440	-	75	65.064	Sus_scrofa
ENSVPAG00000008152	SF3B4	100	99.757	ENSSSCG00000006665	-	97	99.757	Sus_scrofa
ENSVPAG00000008152	SF3B4	54	96.875	ENSTGUG00000004470	SF3B4	85	98.148	Taeniopygia_guttata
ENSVPAG00000008152	SF3B4	52	96.744	ENSTRUG00000004516	sf3b4	54	96.296	Takifugu_rubripes
ENSVPAG00000008152	SF3B4	100	100.000	ENSTTRG00000005217	SF3B4	97	100.000	Tursiops_truncatus
ENSVPAG00000008152	SF3B4	100	100.000	ENSUAMG00000022468	SF3B4	97	100.000	Ursus_americanus
ENSVPAG00000008152	SF3B4	100	99.029	ENSUMAG00000003802	SF3B4	97	99.029	Ursus_maritimus
ENSVPAG00000008152	SF3B4	99	92.611	ENSVVUG00000007732	-	97	92.611	Vulpes_vulpes
ENSVPAG00000008152	SF3B4	65	97.026	ENSVVUG00000022697	-	56	97.026	Vulpes_vulpes
ENSVPAG00000008152	SF3B4	53	97.248	ENSXCOG00000019895	sf3b4	55	97.685	Xiphophorus_couchianus
ENSVPAG00000008152	SF3B4	53	97.248	ENSXMAG00000003772	sf3b4	55	97.685	Xiphophorus_maculatus