EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000008278 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 37003 bases
Position: chrGeneScaffold_1933:390480-427482
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000007701	POP1	PF06978.11	4.3e-36	1	2
ENSVPAP00000007701	POP1	PF06978.11	4.3e-36	2	2
ENSVPAP00000007701	POPLD	PF08170.12	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000008277	POP1-201	3060	-	ENSVPAP00000007701	1019 (aa)	-	UPI00018BE45F

Gene Model

Click here to download ENSVPAG00000008278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000008278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000008278	POP1	82	87.956	ENSG00000104356	POP1	100	86.885	Homo_sapiens
ENSVPAG00000008278	POP1	81	53.597	ENSAPOG00000008198	pop1	85	54.317	Acanthochromis_polyacanthus
ENSVPAG00000008278	POP1	82	83.871	ENSAMEG00000000556	POP1	83	83.871	Ailuropoda_melanoleuca
ENSVPAG00000008278	POP1	72	68.452	ENSACIG00000004169	POP1	85	51.103	Amphilophus_citrinellus
ENSVPAG00000008278	POP1	81	52.113	ENSAOCG00000010991	pop1	85	52.817	Amphiprion_ocellaris
ENSVPAG00000008278	POP1	73	61.667	ENSAPEG00000007607	pop1	82	63.128	Amphiprion_percula
ENSVPAG00000008278	POP1	82	50.530	ENSATEG00000024814	POP1	86	50.530	Anabas_testudineus
ENSVPAG00000008278	POP1	74	74.611	ENSAPLG00000014418	POP1	81	74.611	Anas_platyrhynchos
ENSVPAG00000008278	POP1	82	60.286	ENSACAG00000016083	POP1	82	60.286	Anolis_carolinensis
ENSVPAG00000008278	POP1	70	87.826	ENSANAG00000026360	POP1	79	87.826	Aotus_nancymaae
ENSVPAG00000008278	POP1	82	53.025	ENSACLG00000010951	pop1	86	52.650	Astatotilapia_calliptera
ENSVPAG00000008278	POP1	82	51.957	ENSAMXG00000014483	POP1	87	51.957	Astyanax_mexicanus
ENSVPAG00000008278	POP1	81	90.842	ENSBTAG00000012596	POP1	82	90.842	Bos_taurus
ENSVPAG00000008278	POP1	82	87.644	ENSCJAG00000015567	POP1	82	87.644	Callithrix_jacchus
ENSVPAG00000008278	POP1	82	86.447	ENSCAFG00000000469	POP1	85	86.447	Canis_familiaris
ENSVPAG00000008278	POP1	82	86.447	ENSCAFG00020026765	POP1	82	86.447	Canis_lupus_dingo
ENSVPAG00000008278	POP1	81	91.209	ENSCHIG00000017066	POP1	82	91.209	Capra_hircus
ENSVPAG00000008278	POP1	82	89.781	ENSTSYG00000003097	POP1	82	89.781	Carlito_syrichta
ENSVPAG00000008278	POP1	80	87.891	ENSCAPG00000007251	POP1	82	87.891	Cavia_aperea
ENSVPAG00000008278	POP1	82	87.546	ENSCPOG00000002901	POP1	82	87.546	Cavia_porcellus
ENSVPAG00000008278	POP1	88	78.216	ENSCCAG00000018939	POP1	83	88.686	Cebus_capucinus
ENSVPAG00000008278	POP1	82	87.591	ENSCATG00000040916	POP1	82	87.591	Cercocebus_atys
ENSVPAG00000008278	POP1	82	88.278	ENSCLAG00000007208	POP1	80	88.278	Chinchilla_lanigera
ENSVPAG00000008278	POP1	72	90.698	ENSCSAG00000012340	POP1	79	90.698	Chlorocebus_sabaeus
ENSVPAG00000008278	POP1	77	87.611	ENSCHOG00000011432	POP1	81	87.611	Choloepus_hoffmanni
ENSVPAG00000008278	POP1	82	68.592	ENSCPBG00000006373	POP1	84	68.592	Chrysemys_picta_bellii
ENSVPAG00000008278	POP1	58	45.405	ENSCING00000008323	-	65	45.405	Ciona_intestinalis
ENSVPAG00000008278	POP1	82	87.956	ENSCANG00000001647	POP1	82	87.956	Colobus_angolensis_palliatus
ENSVPAG00000008278	POP1	82	82.482	ENSCGRG00001017308	Pop1	83	82.482	Cricetulus_griseus_chok1gshd
ENSVPAG00000008278	POP1	82	73.487	ENSCGRG00000010824	Pop1	82	73.487	Cricetulus_griseus_crigri
ENSVPAG00000008278	POP1	82	50.000	ENSCSEG00000008737	POP1	86	50.000	Cynoglossus_semilaevis
ENSVPAG00000008278	POP1	80	53.791	ENSCVAG00000022248	pop1	85	53.791	Cyprinodon_variegatus
ENSVPAG00000008278	POP1	82	86.331	ENSDNOG00000019974	POP1	83	86.331	Dasypus_novemcinctus
ENSVPAG00000008278	POP1	82	83.621	ENSDORG00000015384	Pop1	81	83.621	Dipodomys_ordii
ENSVPAG00000008278	POP1	70	77.860	ENSETEG00000007839	POP1	71	77.860	Echinops_telfairi
ENSVPAG00000008278	POP1	82	89.051	ENSEASG00005003189	POP1	81	89.051	Equus_asinus_asinus
ENSVPAG00000008278	POP1	82	89.781	ENSECAG00000024236	POP1	82	89.781	Equus_caballus
ENSVPAG00000008278	POP1	55	85.217	ENSEEUG00000003050	-	58	85.217	Erinaceus_europaeus
ENSVPAG00000008278	POP1	82	54.839	ENSELUG00000003526	pop1	86	54.965	Esox_lucius
ENSVPAG00000008278	POP1	82	87.226	ENSFCAG00000002168	POP1	82	87.226	Felis_catus
ENSVPAG00000008278	POP1	82	61.605	ENSFALG00000005711	POP1	83	62.545	Ficedula_albicollis
ENSVPAG00000008278	POP1	82	88.686	ENSFDAG00000017068	POP1	82	88.686	Fukomys_damarensis
ENSVPAG00000008278	POP1	82	52.158	ENSFHEG00000019518	pop1	86	51.786	Fundulus_heteroclitus
ENSVPAG00000008278	POP1	74	53.030	ENSGMOG00000000659	POP1	82	53.030	Gadus_morhua
ENSVPAG00000008278	POP1	80	52.555	ENSGAFG00000019770	POP1	85	52.555	Gambusia_affinis
ENSVPAG00000008278	POP1	81	50.735	ENSGACG00000003499	pop1	83	50.000	Gasterosteus_aculeatus
ENSVPAG00000008278	POP1	82	67.335	ENSGAGG00000011737	POP1	82	67.335	Gopherus_agassizii
ENSVPAG00000008278	POP1	82	87.644	ENSGGOG00000003176	POP1	82	87.644	Gorilla_gorilla
ENSVPAG00000008278	POP1	82	53.025	ENSHBUG00000021583	pop1	86	52.650	Haplochromis_burtoni
ENSVPAG00000008278	POP1	82	86.813	ENSHGLG00000006029	POP1	82	86.813	Heterocephalus_glaber_female
ENSVPAG00000008278	POP1	82	86.813	ENSHGLG00100016879	POP1	82	86.813	Heterocephalus_glaber_male
ENSVPAG00000008278	POP1	71	65.868	ENSHCOG00000013888	pop1	78	65.868	Hippocampus_comes
ENSVPAG00000008278	POP1	82	51.944	ENSIPUG00000018336	pop1	78	60.241	Ictalurus_punctatus
ENSVPAG00000008278	POP1	82	85.766	ENSSTOG00000011455	POP1	80	85.766	Ictidomys_tridecemlineatus
ENSVPAG00000008278	POP1	82	84.982	ENSJJAG00000013325	Pop1	83	84.982	Jaculus_jaculus
ENSVPAG00000008278	POP1	81	51.071	ENSKMAG00000001346	POP1	86	52.143	Kryptolebias_marmoratus
ENSVPAG00000008278	POP1	71	63.125	ENSLBEG00000024457	POP1	80	60.674	Labrus_bergylta
ENSVPAG00000008278	POP1	75	65.550	ENSLACG00000012498	POP1	83	65.550	Latimeria_chalumnae
ENSVPAG00000008278	POP1	82	54.261	ENSLOCG00000009817	POP1	84	54.545	Lepisosteus_oculatus
ENSVPAG00000008278	POP1	82	84.173	ENSLAFG00000010770	POP1	83	84.173	Loxodonta_africana
ENSVPAG00000008278	POP1	82	87.956	ENSMFAG00000000347	POP1	82	87.956	Macaca_fascicularis
ENSVPAG00000008278	POP1	82	87.956	ENSMNEG00000036870	POP1	82	87.956	Macaca_nemestrina
ENSVPAG00000008278	POP1	82	87.956	ENSMLEG00000034986	POP1	82	87.956	Mandrillus_leucophaeus
ENSVPAG00000008278	POP1	82	51.079	ENSMAMG00000004040	pop1	86	50.714	Mastacembelus_armatus
ENSVPAG00000008278	POP1	82	53.025	ENSMZEG00005025448	pop1	86	52.650	Maylandia_zebra
ENSVPAG00000008278	POP1	82	59.273	ENSMGAG00000012167	POP1	83	60.727	Meleagris_gallopavo
ENSVPAG00000008278	POP1	82	83.577	ENSMAUG00000017537	Pop1	83	83.577	Mesocricetus_auratus
ENSVPAG00000008278	POP1	82	87.912	ENSMICG00000004361	POP1	83	87.912	Microcebus_murinus
ENSVPAG00000008278	POP1	82	83.942	ENSMOCG00000006356	Pop1	83	83.942	Microtus_ochrogaster
ENSVPAG00000008278	POP1	80	46.396	ENSMMOG00000018242	pop1	85	46.460	Mola_mola
ENSVPAG00000008278	POP1	82	74.212	ENSMODG00000006561	POP1	82	74.212	Monodelphis_domestica
ENSVPAG00000008278	POP1	82	50.709	ENSMALG00000012621	POP1	86	50.709	Monopterus_albus
ENSVPAG00000008278	POP1	82	83.942	MGP_CAROLIEiJ_G0019726	Pop1	83	83.942	Mus_caroli
ENSVPAG00000008278	POP1	82	84.249	ENSMUSG00000022325	Pop1	83	84.249	Mus_musculus
ENSVPAG00000008278	POP1	82	84.249	MGP_PahariEiJ_G0019735	Pop1	83	84.249	Mus_pahari
ENSVPAG00000008278	POP1	82	84.982	MGP_SPRETEiJ_G0020622	Pop1	83	84.982	Mus_spretus
ENSVPAG00000008278	POP1	82	87.591	ENSMPUG00000015250	POP1	82	87.591	Mustela_putorius_furo
ENSVPAG00000008278	POP1	81	87.956	ENSMLUG00000010204	POP1	82	87.956	Myotis_lucifugus
ENSVPAG00000008278	POP1	82	86.861	ENSNGAG00000001582	Pop1	82	86.861	Nannospalax_galili
ENSVPAG00000008278	POP1	71	61.250	ENSNBRG00000002356	pop1	79	61.404	Neolamprologus_brichardi
ENSVPAG00000008278	POP1	82	87.591	ENSNLEG00000002541	POP1	82	87.591	Nomascus_leucogenys
ENSVPAG00000008278	POP1	73	78.774	ENSMEUG00000003118	POP1	80	78.774	Notamacropus_eugenii
ENSVPAG00000008278	POP1	82	86.131	ENSOPRG00000007667	POP1	83	86.131	Ochotona_princeps
ENSVPAG00000008278	POP1	82	87.912	ENSODEG00000003984	POP1	82	87.912	Octodon_degus
ENSVPAG00000008278	POP1	82	53.025	ENSONIG00000016445	pop1	86	52.650	Oreochromis_niloticus
ENSVPAG00000008278	POP1	53	73.333	ENSOANG00000001278	-	85	73.333	Ornithorhynchus_anatinus
ENSVPAG00000008278	POP1	82	85.971	ENSOCUG00000017400	POP1	82	85.971	Oryctolagus_cuniculus
ENSVPAG00000008278	POP1	74	61.538	ENSORLG00000002839	pop1	86	51.685	Oryzias_latipes
ENSVPAG00000008278	POP1	72	64.912	ENSORLG00020022450	POP1	79	64.912	Oryzias_latipes_hni
ENSVPAG00000008278	POP1	74	62.051	ENSORLG00015012746	POP1	86	50.903	Oryzias_latipes_hsok
ENSVPAG00000008278	POP1	82	50.542	ENSOMEG00000006915	pop1	85	50.542	Oryzias_melastigma
ENSVPAG00000008278	POP1	82	85.401	ENSOGAG00000001466	POP1	82	85.401	Otolemur_garnettii
ENSVPAG00000008278	POP1	82	88.686	ENSPPAG00000018410	POP1	82	88.686	Pan_paniscus
ENSVPAG00000008278	POP1	82	86.813	ENSPPRG00000005002	POP1	82	86.813	Panthera_pardus
ENSVPAG00000008278	POP1	82	86.813	ENSPTIG00000016527	POP1	82	86.813	Panthera_tigris_altaica
ENSVPAG00000008278	POP1	82	88.321	ENSPTRG00000020458	POP1	82	88.321	Pan_troglodytes
ENSVPAG00000008278	POP1	82	87.591	ENSPANG00000009704	POP1	82	87.591	Papio_anubis
ENSVPAG00000008278	POP1	82	56.318	ENSPKIG00000016325	POP1	86	56.679	Paramormyrops_kingsleyae
ENSVPAG00000008278	POP1	82	67.021	ENSPSIG00000012343	POP1	83	67.021	Pelodiscus_sinensis
ENSVPAG00000008278	POP1	72	65.680	ENSPMGG00000022253	POP1	77	64.740	Periophthalmus_magnuspinnatus
ENSVPAG00000008278	POP1	82	83.150	ENSPEMG00000023633	Pop1	83	83.150	Peromyscus_maniculatus_bairdii
ENSVPAG00000008278	POP1	72	60.234	ENSPMAG00000003209	POP1	80	60.234	Petromyzon_marinus
ENSVPAG00000008278	POP1	81	74.138	ENSPCIG00000012216	POP1	82	74.138	Phascolarctos_cinereus
ENSVPAG00000008278	POP1	81	53.091	ENSPFOG00000012490	POP1	85	52.364	Poecilia_formosa
ENSVPAG00000008278	POP1	81	51.825	ENSPLAG00000004646	POP1	85	51.825	Poecilia_latipinna
ENSVPAG00000008278	POP1	81	53.309	ENSPMEG00000019592	POP1	85	53.309	Poecilia_mexicana
ENSVPAG00000008278	POP1	81	52.555	ENSPREG00000020951	POP1	85	52.555	Poecilia_reticulata
ENSVPAG00000008278	POP1	82	88.686	ENSPPYG00000018777	POP1	82	88.686	Pongo_abelii
ENSVPAG00000008278	POP1	77	81.818	ENSPCAG00000016662	POP1	77	81.818	Procavia_capensis
ENSVPAG00000008278	POP1	82	89.377	ENSPCOG00000019420	POP1	82	89.377	Propithecus_coquereli
ENSVPAG00000008278	POP1	82	87.591	ENSPVAG00000014468	POP1	83	87.591	Pteropus_vampyrus
ENSVPAG00000008278	POP1	71	61.875	ENSPNYG00000004476	pop1	83	57.286	Pundamilia_nyererei
ENSVPAG00000008278	POP1	82	50.903	ENSPNAG00000000265	pop1	87	50.903	Pygocentrus_nattereri
ENSVPAG00000008278	POP1	82	84.672	ENSRNOG00000005243	Pop1	83	84.672	Rattus_norvegicus
ENSVPAG00000008278	POP1	82	87.956	ENSRBIG00000007996	POP1	82	87.956	Rhinopithecus_bieti
ENSVPAG00000008278	POP1	82	87.956	ENSRROG00000012334	POP1	82	87.956	Rhinopithecus_roxellana
ENSVPAG00000008278	POP1	81	88.550	ENSSBOG00000020830	POP1	82	88.550	Saimiri_boliviensis_boliviensis
ENSVPAG00000008278	POP1	82	72.989	ENSSHAG00000000296	POP1	83	72.760	Sarcophilus_harrisii
ENSVPAG00000008278	POP1	81	53.957	ENSSFOG00015007429	pop1	86	53.957	Scleropages_formosus
ENSVPAG00000008278	POP1	75	56.000	ENSSMAG00000010467	POP1	84	55.446	Scophthalmus_maximus
ENSVPAG00000008278	POP1	82	50.355	ENSSDUG00000007817	POP1	86	51.418	Seriola_dumerili
ENSVPAG00000008278	POP1	82	50.709	ENSSLDG00000012565	POP1	86	51.418	Seriola_lalandi_dorsalis
ENSVPAG00000008278	POP1	81	69.203	ENSSPUG00000003550	-	85	69.203	Sphenodon_punctatus
ENSVPAG00000008278	POP1	71	67.262	ENSSPAG00000014955	pop1	77	67.262	Stegastes_partitus
ENSVPAG00000008278	POP1	82	91.209	ENSSSCG00000006078	POP1	83	91.209	Sus_scrofa
ENSVPAG00000008278	POP1	70	78.010	ENSTGUG00000012011	-	77	78.010	Taeniopygia_guttata
ENSVPAG00000008278	POP1	73	60.109	ENSTRUG00000010856	pop1	80	60.109	Takifugu_rubripes
ENSVPAG00000008278	POP1	75	56.075	ENSTNIG00000013297	pop1	82	57.009	Tetraodon_nigroviridis
ENSVPAG00000008278	POP1	77	87.665	ENSTBEG00000014214	POP1	81	87.665	Tupaia_belangeri
ENSVPAG00000008278	POP1	82	91.575	ENSTTRG00000016071	POP1	82	91.575	Tursiops_truncatus
ENSVPAG00000008278	POP1	81	83.954	ENSUAMG00000017309	POP1	82	83.954	Ursus_americanus
ENSVPAG00000008278	POP1	82	86.131	ENSUMAG00000016952	POP1	88	85.020	Ursus_maritimus
ENSVPAG00000008278	POP1	82	86.207	ENSVVUG00000010994	POP1	82	86.207	Vulpes_vulpes
ENSVPAG00000008278	POP1	80	50.362	ENSXCOG00000017043	POP1	85	50.362	Xiphophorus_couchianus
ENSVPAG00000008278	POP1	77	52.555	ENSXMAG00000002472	POP1	85	52.555	Xiphophorus_maculatus