EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000008302 (Gene tree)
Gene ID: -
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 455118 bases
Position: chrGeneScaffold_3037:1394791-1849908
Accession: 30646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000007723	TUDOR	PF00567.24	9.1e-10	1	1
ENSVPAP00000007723	SNase	PF00565.17	2.3e-36	1	3
ENSVPAP00000007723	SNase	PF00565.17	2.3e-36	2	3
ENSVPAP00000007723	SNase	PF00565.17	2.3e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000008302	SND1-201	2577	-	ENSVPAP00000007723	858 (aa)	-	UPI00018BEAF5

Gene Model

Click here to download ENSVPAG00000008302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000008302's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000008302	SND1	74	100.000	ENSG00000197157	SND1	77	100.000	Homo_sapiens
ENSVPAG00000008302	SND1	74	91.667	ENSAPOG00000017599	snd1	77	91.667	Acanthochromis_polyacanthus
ENSVPAG00000008302	SND1	74	100.000	ENSAMEG00000004664	SND1	69	100.000	Ailuropoda_melanoleuca
ENSVPAG00000008302	SND1	74	91.667	ENSACIG00000003551	snd1	77	91.667	Amphilophus_citrinellus
ENSVPAG00000008302	SND1	74	91.667	ENSAOCG00000014166	snd1	77	91.667	Amphiprion_ocellaris
ENSVPAG00000008302	SND1	74	91.667	ENSAPEG00000007067	snd1	77	91.667	Amphiprion_percula
ENSVPAG00000008302	SND1	70	80.328	ENSATEG00000018475	snd1	67	80.328	Anabas_testudineus
ENSVPAG00000008302	SND1	74	100.000	ENSANAG00000034463	SND1	79	100.000	Aotus_nancymaae
ENSVPAG00000008302	SND1	74	91.667	ENSACLG00000022897	snd1	77	91.667	Astatotilapia_calliptera
ENSVPAG00000008302	SND1	74	88.889	ENSAMXG00000016318	snd1	77	90.476	Astyanax_mexicanus
ENSVPAG00000008302	SND1	74	100.000	ENSBTAG00000010692	SND1	77	100.000	Bos_taurus
ENSVPAG00000008302	SND1	63	47.652	WBGene00006626	tsn-1	66	47.652	Caenorhabditis_elegans
ENSVPAG00000008302	SND1	74	100.000	ENSCJAG00000017668	SND1	78	100.000	Callithrix_jacchus
ENSVPAG00000008302	SND1	74	100.000	ENSCAFG00000001700	SND1	77	100.000	Canis_familiaris
ENSVPAG00000008302	SND1	74	100.000	ENSCAFG00020021639	SND1	77	100.000	Canis_lupus_dingo
ENSVPAG00000008302	SND1	74	100.000	ENSCHIG00000023390	SND1	78	100.000	Capra_hircus
ENSVPAG00000008302	SND1	63	87.478	ENSTSYG00000004979	SND1	96	87.478	Carlito_syrichta
ENSVPAG00000008302	SND1	74	100.000	ENSCAPG00000010677	SND1	81	100.000	Cavia_aperea
ENSVPAG00000008302	SND1	74	100.000	ENSCPOG00000006251	SND1	77	100.000	Cavia_porcellus
ENSVPAG00000008302	SND1	74	100.000	ENSCCAG00000036847	SND1	79	100.000	Cebus_capucinus
ENSVPAG00000008302	SND1	74	100.000	ENSCATG00000035214	SND1	79	100.000	Cercocebus_atys
ENSVPAG00000008302	SND1	74	100.000	ENSCLAG00000011796	SND1	93	87.478	Chinchilla_lanigera
ENSVPAG00000008302	SND1	74	100.000	ENSCSAG00000010182	SND1	77	100.000	Chlorocebus_sabaeus
ENSVPAG00000008302	SND1	62	98.000	ENSCHOG00000002218	SND1	75	98.000	Choloepus_hoffmanni
ENSVPAG00000008302	SND1	74	91.667	ENSCPBG00000018094	SND1	73	91.667	Chrysemys_picta_bellii
ENSVPAG00000008302	SND1	74	56.995	ENSCING00000000524	-	74	56.995	Ciona_intestinalis
ENSVPAG00000008302	SND1	74	57.692	ENSCSAVG00000008807	-	73	57.692	Ciona_savignyi
ENSVPAG00000008302	SND1	74	100.000	ENSCANG00000035119	SND1	77	100.000	Colobus_angolensis_palliatus
ENSVPAG00000008302	SND1	74	100.000	ENSCGRG00001022514	Snd1	93	86.243	Cricetulus_griseus_chok1gshd
ENSVPAG00000008302	SND1	74	100.000	ENSCGRG00000012277	Snd1	79	100.000	Cricetulus_griseus_crigri
ENSVPAG00000008302	SND1	74	88.889	ENSCSEG00000008661	snd1	80	88.889	Cynoglossus_semilaevis
ENSVPAG00000008302	SND1	74	88.889	ENSCVAG00000010316	snd1	77	88.889	Cyprinodon_variegatus
ENSVPAG00000008302	SND1	74	88.889	ENSDARG00000006766	snd1	95	77.574	Danio_rerio
ENSVPAG00000008302	SND1	74	100.000	ENSDNOG00000006795	SND1	75	100.000	Dasypus_novemcinctus
ENSVPAG00000008302	SND1	74	100.000	ENSDORG00000000336	Snd1	77	100.000	Dipodomys_ordii
ENSVPAG00000008302	SND1	70	52.459	FBgn0035121	Tudor-SN	72	52.459	Drosophila_melanogaster
ENSVPAG00000008302	SND1	60	100.000	ENSETEG00000000375	SND1	64	100.000	Echinops_telfairi
ENSVPAG00000008302	SND1	74	100.000	ENSEASG00005008513	SND1	77	100.000	Equus_asinus_asinus
ENSVPAG00000008302	SND1	74	100.000	ENSECAG00000011451	SND1	78	100.000	Equus_caballus
ENSVPAG00000008302	SND1	70	88.525	ENSEEUG00000014737	SND1	69	88.525	Erinaceus_europaeus
ENSVPAG00000008302	SND1	74	85.294	ENSELUG00000001805	snd1	70	85.294	Esox_lucius
ENSVPAG00000008302	SND1	74	100.000	ENSFCAG00000008289	SND1	80	100.000	Felis_catus
ENSVPAG00000008302	SND1	74	100.000	ENSFDAG00000015881	SND1	77	100.000	Fukomys_damarensis
ENSVPAG00000008302	SND1	74	88.889	ENSFHEG00000004093	snd1	75	88.889	Fundulus_heteroclitus
ENSVPAG00000008302	SND1	74	88.889	ENSGAFG00000008421	snd1	79	88.889	Gambusia_affinis
ENSVPAG00000008302	SND1	74	88.889	ENSGACG00000019793	snd1	73	88.889	Gasterosteus_aculeatus
ENSVPAG00000008302	SND1	74	100.000	ENSGGOG00000009614	SND1	78	100.000	Gorilla_gorilla
ENSVPAG00000008302	SND1	74	91.667	ENSHBUG00000019135	snd1	78	91.667	Haplochromis_burtoni
ENSVPAG00000008302	SND1	74	100.000	ENSHGLG00000003618	SND1	93	87.125	Heterocephalus_glaber_female
ENSVPAG00000008302	SND1	74	100.000	ENSHGLG00100012449	SND1	77	100.000	Heterocephalus_glaber_male
ENSVPAG00000008302	SND1	74	86.111	ENSHCOG00000005266	snd1	77	86.111	Hippocampus_comes
ENSVPAG00000008302	SND1	74	88.889	ENSIPUG00000013279	snd1	77	88.889	Ictalurus_punctatus
ENSVPAG00000008302	SND1	74	100.000	ENSSTOG00000002140	SND1	77	100.000	Ictidomys_tridecemlineatus
ENSVPAG00000008302	SND1	74	100.000	ENSJJAG00000009561	Snd1	77	100.000	Jaculus_jaculus
ENSVPAG00000008302	SND1	74	91.667	ENSKMAG00000016997	snd1	73	91.667	Kryptolebias_marmoratus
ENSVPAG00000008302	SND1	70	95.652	ENSLBEG00000013563	snd1	76	95.652	Labrus_bergylta
ENSVPAG00000008302	SND1	74	94.444	ENSLOCG00000015537	snd1	74	94.444	Lepisosteus_oculatus
ENSVPAG00000008302	SND1	74	100.000	ENSLAFG00000009696	SND1	77	100.000	Loxodonta_africana
ENSVPAG00000008302	SND1	74	100.000	ENSMFAG00000038114	SND1	79	100.000	Macaca_fascicularis
ENSVPAG00000008302	SND1	74	100.000	ENSMMUG00000015432	SND1	93	87.965	Macaca_mulatta
ENSVPAG00000008302	SND1	74	100.000	ENSMNEG00000039808	SND1	97	87.965	Macaca_nemestrina
ENSVPAG00000008302	SND1	74	100.000	ENSMLEG00000029040	SND1	97	87.965	Mandrillus_leucophaeus
ENSVPAG00000008302	SND1	74	91.667	ENSMAMG00000011739	snd1	77	91.667	Mastacembelus_armatus
ENSVPAG00000008302	SND1	73	95.238	ENSMZEG00005005681	snd1	77	95.238	Maylandia_zebra
ENSVPAG00000008302	SND1	74	100.000	ENSMICG00000000097	SND1	78	100.000	Microcebus_murinus
ENSVPAG00000008302	SND1	74	100.000	ENSMOCG00000005040	Snd1	77	100.000	Microtus_ochrogaster
ENSVPAG00000008302	SND1	74	88.889	ENSMMOG00000001795	snd1	77	88.889	Mola_mola
ENSVPAG00000008302	SND1	74	100.000	ENSMODG00000015182	SND1	77	100.000	Monodelphis_domestica
ENSVPAG00000008302	SND1	74	91.667	ENSMALG00000012071	snd1	77	91.667	Monopterus_albus
ENSVPAG00000008302	SND1	74	100.000	MGP_CAROLIEiJ_G0028159	Snd1	94	86.772	Mus_caroli
ENSVPAG00000008302	SND1	74	100.000	ENSMUSG00000001424	Snd1	93	86.420	Mus_musculus
ENSVPAG00000008302	SND1	74	100.000	MGP_PahariEiJ_G0021917	Snd1	95	86.772	Mus_pahari
ENSVPAG00000008302	SND1	74	100.000	MGP_SPRETEiJ_G0029159	Snd1	93	86.772	Mus_spretus
ENSVPAG00000008302	SND1	74	100.000	ENSMPUG00000006545	SND1	77	100.000	Mustela_putorius_furo
ENSVPAG00000008302	SND1	74	100.000	ENSMLUG00000017130	SND1	74	100.000	Myotis_lucifugus
ENSVPAG00000008302	SND1	74	100.000	ENSNGAG00000011186	Snd1	77	100.000	Nannospalax_galili
ENSVPAG00000008302	SND1	74	91.667	ENSNBRG00000006681	snd1	77	91.667	Neolamprologus_brichardi
ENSVPAG00000008302	SND1	74	100.000	ENSNLEG00000012263	SND1	94	88.007	Nomascus_leucogenys
ENSVPAG00000008302	SND1	74	100.000	ENSOPRG00000013405	SND1	74	100.000	Ochotona_princeps
ENSVPAG00000008302	SND1	74	100.000	ENSODEG00000011502	SND1	77	100.000	Octodon_degus
ENSVPAG00000008302	SND1	74	91.667	ENSONIG00000011481	snd1	75	91.667	Oreochromis_niloticus
ENSVPAG00000008302	SND1	74	100.000	ENSOANG00000000817	SND1	73	100.000	Ornithorhynchus_anatinus
ENSVPAG00000008302	SND1	74	100.000	ENSOCUG00000001620	SND1	77	100.000	Oryctolagus_cuniculus
ENSVPAG00000008302	SND1	74	88.889	ENSORLG00000015201	snd1	77	88.889	Oryzias_latipes
ENSVPAG00000008302	SND1	74	88.889	ENSORLG00020013991	snd1	77	88.889	Oryzias_latipes_hni
ENSVPAG00000008302	SND1	74	88.889	ENSORLG00015012436	snd1	77	88.889	Oryzias_latipes_hsok
ENSVPAG00000008302	SND1	74	88.889	ENSOMEG00000006406	snd1	77	88.889	Oryzias_melastigma
ENSVPAG00000008302	SND1	74	100.000	ENSOGAG00000013356	SND1	69	100.000	Otolemur_garnettii
ENSVPAG00000008302	SND1	74	100.000	ENSOARG00000002149	SND1	75	100.000	Ovis_aries
ENSVPAG00000008302	SND1	74	100.000	ENSPPAG00000042947	SND1	78	100.000	Pan_paniscus
ENSVPAG00000008302	SND1	74	100.000	ENSPPRG00000004494	SND1	77	100.000	Panthera_pardus
ENSVPAG00000008302	SND1	74	100.000	ENSPTIG00000014214	SND1	77	100.000	Panthera_tigris_altaica
ENSVPAG00000008302	SND1	74	100.000	ENSPTRG00000023911	SND1	78	100.000	Pan_troglodytes
ENSVPAG00000008302	SND1	74	100.000	ENSPANG00000011997	SND1	80	100.000	Papio_anubis
ENSVPAG00000008302	SND1	74	86.111	ENSPKIG00000023494	snd1	73	86.111	Paramormyrops_kingsleyae
ENSVPAG00000008302	SND1	68	80.328	ENSPMGG00000003629	snd1	78	80.328	Periophthalmus_magnuspinnatus
ENSVPAG00000008302	SND1	74	100.000	ENSPEMG00000010240	Snd1	77	100.000	Peromyscus_maniculatus_bairdii
ENSVPAG00000008302	SND1	70	70.877	ENSPMAG00000007915	-	75	70.877	Petromyzon_marinus
ENSVPAG00000008302	SND1	74	100.000	ENSPCIG00000011561	SND1	73	100.000	Phascolarctos_cinereus
ENSVPAG00000008302	SND1	74	88.889	ENSPFOG00000001557	snd1	77	88.889	Poecilia_formosa
ENSVPAG00000008302	SND1	74	88.889	ENSPLAG00000018459	snd1	75	88.889	Poecilia_latipinna
ENSVPAG00000008302	SND1	74	88.889	ENSPMEG00000006803	snd1	77	88.889	Poecilia_mexicana
ENSVPAG00000008302	SND1	74	88.889	ENSPREG00000002189	snd1	77	88.889	Poecilia_reticulata
ENSVPAG00000008302	SND1	74	100.000	ENSPPYG00000017972	SND1	83	100.000	Pongo_abelii
ENSVPAG00000008302	SND1	74	100.000	ENSPCAG00000011305	SND1	73	100.000	Procavia_capensis
ENSVPAG00000008302	SND1	74	100.000	ENSPCOG00000026791	SND1	79	100.000	Propithecus_coquereli
ENSVPAG00000008302	SND1	74	100.000	ENSPVAG00000013945	SND1	73	100.000	Pteropus_vampyrus
ENSVPAG00000008302	SND1	74	91.667	ENSPNYG00000000932	snd1	77	91.667	Pundamilia_nyererei
ENSVPAG00000008302	SND1	74	88.889	ENSPNAG00000001206	snd1	77	88.889	Pygocentrus_nattereri
ENSVPAG00000008302	SND1	74	100.000	ENSRNOG00000031173	Snd1	79	100.000	Rattus_norvegicus
ENSVPAG00000008302	SND1	63	87.006	ENSRBIG00000027782	-	93	86.882	Rhinopithecus_bieti
ENSVPAG00000008302	SND1	74	100.000	ENSRROG00000033020	SND1	77	100.000	Rhinopithecus_roxellana
ENSVPAG00000008302	SND1	74	100.000	ENSSBOG00000032461	SND1	92	87.831	Saimiri_boliviensis_boliviensis
ENSVPAG00000008302	SND1	74	100.000	ENSSHAG00000015359	SND1	79	100.000	Sarcophilus_harrisii
ENSVPAG00000008302	SND1	74	80.556	ENSSFOG00015001103	snd1	77	80.556	Scleropages_formosus
ENSVPAG00000008302	SND1	74	88.889	ENSSMAG00000001932	snd1	73	88.889	Scophthalmus_maximus
ENSVPAG00000008302	SND1	74	91.667	ENSSDUG00000002699	snd1	72	91.667	Seriola_dumerili
ENSVPAG00000008302	SND1	74	91.667	ENSSLDG00000001950	snd1	72	91.667	Seriola_lalandi_dorsalis
ENSVPAG00000008302	SND1	67	92.105	ENSSARG00000004877	SND1	76	92.105	Sorex_araneus
ENSVPAG00000008302	SND1	63	77.565	ENSSPUG00000017586	SND1	96	77.565	Sphenodon_punctatus
ENSVPAG00000008302	SND1	63	76.937	ENSSPAG00000021398	snd1	95	76.814	Stegastes_partitus
ENSVPAG00000008302	SND1	74	100.000	ENSSSCG00000016590	SND1	77	100.000	Sus_scrofa
ENSVPAG00000008302	SND1	74	86.111	ENSTRUG00000014067	snd1	77	86.111	Takifugu_rubripes
ENSVPAG00000008302	SND1	74	86.111	ENSTNIG00000011019	snd1	94	77.680	Tetraodon_nigroviridis
ENSVPAG00000008302	SND1	70	93.443	ENSTBEG00000003999	SND1	74	93.443	Tupaia_belangeri
ENSVPAG00000008302	SND1	74	100.000	ENSTTRG00000006059	SND1	72	100.000	Tursiops_truncatus
ENSVPAG00000008302	SND1	61	100.000	ENSUAMG00000005604	-	61	100.000	Ursus_americanus
ENSVPAG00000008302	SND1	57	71.309	ENSUAMG00000002820	-	83	71.309	Ursus_americanus
ENSVPAG00000008302	SND1	74	100.000	ENSUMAG00000005960	SND1	77	100.000	Ursus_maritimus
ENSVPAG00000008302	SND1	74	100.000	ENSVVUG00000007226	SND1	77	100.000	Vulpes_vulpes
ENSVPAG00000008302	SND1	70	80.952	ENSXETG00000023043	snd1	72	80.952	Xenopus_tropicalis
ENSVPAG00000008302	SND1	66	77.355	ENSXCOG00000013629	snd1	75	77.355	Xiphophorus_couchianus
ENSVPAG00000008302	SND1	74	88.889	ENSXMAG00000011469	snd1	77	88.889	Xiphophorus_maculatus