EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSVPAG00000008469 (Gene tree)
Gene ID
-
Gene Symbol
CPSF6
Alias
CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Vicugna_pacos
Status
putative
Strand
Plus strand
Length
12396 bases
Position
chrscaffold_3319:102517-114912
Accession
13871
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVPAP00000007883RRM_1PF00076.223.8e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVPAT00000008469CPSF6-2011707-ENSVPAP00000007883568 (aa)-UPI0001771DAF
Gene Model
Click here to download ENSVPAG00000008469's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000008469's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVPAG00000008469CPSF66254.872ENSG00000149532CPSF79054.598Homo_sapiens
ENSVPAG00000008469CPSF6100100.000ENSG00000111605CPSF697100.000Homo_sapiens
ENSVPAG00000008469CPSF610099.824ENSAMEG00000011781CPSF69799.824Ailuropoda_melanoleuca
ENSVPAG00000008469CPSF66039.698ENSAOCG00000012357CPSF76941.566Amphiprion_ocellaris
ENSVPAG00000008469CPSF6100100.000ENSANAG00000019240CPSF699100.000Aotus_nancymaae
ENSVPAG00000008469CPSF65950.249ENSANAG00000024635CPSF76750.276Aotus_nancymaae
ENSVPAG00000008469CPSF65790.419ENSAMXG00000016745CPSF67089.091Astyanax_mexicanus
ENSVPAG00000008469CPSF65955.385ENSBTAG00000015263CPSF76755.429Bos_taurus
ENSVPAG00000008469CPSF610099.824ENSBTAG00000007323CPSF69799.824Bos_taurus
ENSVPAG00000008469CPSF610099.824ENSCJAG00000001798CPSF69799.824Callithrix_jacchus
ENSVPAG00000008469CPSF66254.872ENSCJAG00000019282CPSF77954.857Callithrix_jacchus
ENSVPAG00000008469CPSF65955.385ENSCAFG00000016152CPSF76756.000Canis_familiaris
ENSVPAG00000008469CPSF6100100.000ENSCAFG00000000424CPSF699100.000Canis_familiaris
ENSVPAG00000008469CPSF6100100.000ENSCAFG00020016950CPSF697100.000Canis_lupus_dingo
ENSVPAG00000008469CPSF65955.385ENSCAFG00020012753CPSF76756.000Canis_lupus_dingo
ENSVPAG00000008469CPSF65955.385ENSCHIG00000014655CPSF76755.429Capra_hircus
ENSVPAG00000008469CPSF610099.824ENSCHIG00000010792CPSF69799.824Capra_hircus
ENSVPAG00000008469CPSF65955.385ENSTSYG00000010138-6756.000Carlito_syrichta
ENSVPAG00000008469CPSF6100100.000ENSTSYG00000008591CPSF699100.000Carlito_syrichta
ENSVPAG00000008469CPSF65955.385ENSCAPG00000006384CPSF77056.000Cavia_aperea
ENSVPAG00000008469CPSF65955.385ENSCPOG00000009980CPSF76756.000Cavia_porcellus
ENSVPAG00000008469CPSF610099.648ENSCPOG00000015201CPSF69799.648Cavia_porcellus
ENSVPAG00000008469CPSF65954.872ENSCCAG00000032367CPSF76755.429Cebus_capucinus
ENSVPAG00000008469CPSF610099.824ENSCCAG00000028149CPSF69799.824Cebus_capucinus
ENSVPAG00000008469CPSF66254.872ENSCATG00000042801CPSF77355.429Cercocebus_atys
ENSVPAG00000008469CPSF6100100.000ENSCATG00000039288CPSF697100.000Cercocebus_atys
ENSVPAG00000008469CPSF610099.648ENSCLAG00000010149CPSF610099.648Chinchilla_lanigera
ENSVPAG00000008469CPSF65955.385ENSCLAG00000003174CPSF76755.429Chinchilla_lanigera
ENSVPAG00000008469CPSF66254.872ENSCSAG00000006414CPSF77355.429Chlorocebus_sabaeus
ENSVPAG00000008469CPSF6100100.000ENSCSAG00000004232CPSF697100.000Chlorocebus_sabaeus
ENSVPAG00000008469CPSF610091.549ENSCPBG00000013322CPSF69691.549Chrysemys_picta_bellii
ENSVPAG00000008469CPSF6100100.000ENSCANG00000037294CPSF6100100.000Colobus_angolensis_palliatus
ENSVPAG00000008469CPSF6100100.000ENSCGRG00001018082Cpsf697100.000Cricetulus_griseus_chok1gshd
ENSVPAG00000008469CPSF65955.897ENSCGRG00001020382Cpsf76757.714Cricetulus_griseus_chok1gshd
ENSVPAG00000008469CPSF66554.378ENSCGRG00000017954Cpsf77357.714Cricetulus_griseus_crigri
ENSVPAG00000008469CPSF6100100.000ENSCGRG00000016909Cpsf6100100.000Cricetulus_griseus_crigri
ENSVPAG00000008469CPSF65043.299ENSCSEG00000001956CPSF75746.154Cynoglossus_semilaevis
ENSVPAG00000008469CPSF66435.874ENSCVAG00000007392CPSF76644.521Cyprinodon_variegatus
ENSVPAG00000008469CPSF610092.970ENSDNOG00000015292CPSF69692.970Dasypus_novemcinctus
ENSVPAG00000008469CPSF65955.385ENSDNOG00000018517CPSF77955.429Dasypus_novemcinctus
ENSVPAG00000008469CPSF6100100.000ENSDORG00000002950Cpsf6100100.000Dipodomys_ordii
ENSVPAG00000008469CPSF610092.606ENSETEG00000002097CPSF69792.606Echinops_telfairi
ENSVPAG00000008469CPSF65955.385ENSEASG00005008196CPSF76756.000Equus_asinus_asinus
ENSVPAG00000008469CPSF6100100.000ENSEASG00005008066CPSF697100.000Equus_asinus_asinus
ENSVPAG00000008469CPSF65953.297ENSECAG00000018521CPSF78655.429Equus_caballus
ENSVPAG00000008469CPSF6100100.000ENSECAG00000015988CPSF697100.000Equus_caballus
ENSVPAG00000008469CPSF610099.296ENSEEUG00000015039CPSF610099.296Erinaceus_europaeus
ENSVPAG00000008469CPSF65955.385ENSFCAG00000013677CPSF78655.429Felis_catus
ENSVPAG00000008469CPSF610099.824ENSFCAG00000002855CPSF69799.824Felis_catus
ENSVPAG00000008469CPSF65853.763ENSFALG00000011927CPSF77156.395Ficedula_albicollis
ENSVPAG00000008469CPSF610091.740ENSFALG00000010157CPSF69991.740Ficedula_albicollis
ENSVPAG00000008469CPSF65955.897ENSFDAG00000003919CPSF76756.000Fukomys_damarensis
ENSVPAG00000008469CPSF610099.472ENSFDAG00000002281CPSF69799.472Fukomys_damarensis
ENSVPAG00000008469CPSF65955.959ENSGALG00000040962CPSF75956.647Gallus_gallus
ENSVPAG00000008469CPSF610091.549ENSGAGG00000010228CPSF69691.549Gopherus_agassizii
ENSVPAG00000008469CPSF610099.824ENSGGOG00000008211CPSF69799.824Gorilla_gorilla
ENSVPAG00000008469CPSF66255.897ENSHGLG00000019090-7356.000Heterocephalus_glaber_female
ENSVPAG00000008469CPSF610099.472ENSHGLG00000000792CPSF69799.472Heterocephalus_glaber_female
ENSVPAG00000008469CPSF610099.472ENSHGLG00100013861CPSF610099.472Heterocephalus_glaber_male
ENSVPAG00000008469CPSF6100100.000ENSSTOG00000014133CPSF610093.486Ictidomys_tridecemlineatus
ENSVPAG00000008469CPSF65955.385ENSSTOG00000007708CPSF76756.000Ictidomys_tridecemlineatus
ENSVPAG00000008469CPSF6100100.000ENSJJAG00000014647Cpsf6100100.000Jaculus_jaculus
ENSVPAG00000008469CPSF66255.385ENSJJAG00000019390Cpsf77356.000Jaculus_jaculus
ENSVPAG00000008469CPSF65740.331ENSLBEG00000000947CPSF76737.838Labrus_bergylta
ENSVPAG00000008469CPSF66144.231ENSLACG00000005542CPSF76944.231Latimeria_chalumnae
ENSVPAG00000008469CPSF610093.486ENSLAFG00000030413CPSF69693.486Loxodonta_africana
ENSVPAG00000008469CPSF610099.824ENSMFAG00000045318CPSF69799.824Macaca_fascicularis
ENSVPAG00000008469CPSF65954.872ENSMFAG00000001401CPSF76855.429Macaca_fascicularis
ENSVPAG00000008469CPSF610099.824ENSMMUG00000002921CPSF69799.824Macaca_mulatta
ENSVPAG00000008469CPSF66254.872ENSMMUG00000015280CPSF77355.429Macaca_mulatta
ENSVPAG00000008469CPSF66254.872ENSMNEG00000029585CPSF77355.429Macaca_nemestrina
ENSVPAG00000008469CPSF610099.824ENSMNEG00000036311CPSF69799.824Macaca_nemestrina
ENSVPAG00000008469CPSF65954.872ENSMLEG00000031269CPSF76855.429Mandrillus_leucophaeus
ENSVPAG00000008469CPSF6100100.000ENSMLEG00000003957CPSF6100100.000Mandrillus_leucophaeus
ENSVPAG00000008469CPSF69541.123ENSMGAG00000004876CPSF75961.446Meleagris_gallopavo
ENSVPAG00000008469CPSF65955.385ENSMAUG00000013020Cpsf76756.000Mesocricetus_auratus
ENSVPAG00000008469CPSF6100100.000ENSMAUG00000013240Cpsf697100.000Mesocricetus_auratus
ENSVPAG00000008469CPSF65955.385ENSMICG00000013788CPSF76756.000Microcebus_murinus
ENSVPAG00000008469CPSF6100100.000ENSMICG00000007385-97100.000Microcebus_murinus
ENSVPAG00000008469CPSF65955.385ENSMOCG00000000072Cpsf76756.000Microtus_ochrogaster
ENSVPAG00000008469CPSF6100100.000ENSMOCG00000013982Cpsf697100.000Microtus_ochrogaster
ENSVPAG00000008469CPSF610092.782ENSMODG00000007123CPSF69692.782Monodelphis_domestica
ENSVPAG00000008469CPSF66890.155ENSMALG00000014908cpsf67491.525Monopterus_albus
ENSVPAG00000008469CPSF6100100.000MGP_CAROLIEiJ_G0015834Cpsf697100.000Mus_caroli
ENSVPAG00000008469CPSF65955.385MGP_CAROLIEiJ_G0022690Cpsf76756.000Mus_caroli
ENSVPAG00000008469CPSF65955.385ENSMUSG00000034820Cpsf76756.000Mus_musculus
ENSVPAG00000008469CPSF610099.648ENSMUSG00000055531Cpsf69799.648Mus_musculus
ENSVPAG00000008469CPSF65955.385MGP_PahariEiJ_G0014184Cpsf76756.000Mus_pahari
ENSVPAG00000008469CPSF68299.668MGP_PahariEiJ_G0031253Cpsf68391.285Mus_pahari
ENSVPAG00000008469CPSF610099.648MGP_SPRETEiJ_G0016657Cpsf69799.648Mus_spretus
ENSVPAG00000008469CPSF65955.385MGP_SPRETEiJ_G0023604Cpsf76756.000Mus_spretus
ENSVPAG00000008469CPSF610091.388ENSMPUG00000017502CPSF69791.388Mustela_putorius_furo
ENSVPAG00000008469CPSF65954.359ENSMPUG00000014163CPSF76654.857Mustela_putorius_furo
ENSVPAG00000008469CPSF610091.388ENSMLUG00000004172-9791.388Myotis_lucifugus
ENSVPAG00000008469CPSF66255.385ENSMLUG00000013278CPSF77356.000Myotis_lucifugus
ENSVPAG00000008469CPSF66785.246ENSMLUG00000023960-7684.324Myotis_lucifugus
ENSVPAG00000008469CPSF67694.928ENSMLUG00000028728-8882.424Myotis_lucifugus
ENSVPAG00000008469CPSF6100100.000ENSNGAG00000015901Cpsf697100.000Nannospalax_galili
ENSVPAG00000008469CPSF65955.385ENSNGAG00000005031Cpsf76756.000Nannospalax_galili
ENSVPAG00000008469CPSF65954.872ENSNLEG00000002529CPSF76155.429Nomascus_leucogenys
ENSVPAG00000008469CPSF610099.649ENSNLEG00000003798CPSF69799.649Nomascus_leucogenys
ENSVPAG00000008469CPSF610096.479ENSMEUG00000015041CPSF69696.479Notamacropus_eugenii
ENSVPAG00000008469CPSF65953.571ENSMEUG00000002261CPSF76755.814Notamacropus_eugenii
ENSVPAG00000008469CPSF610099.472ENSOPRG00000005199CPSF610099.472Ochotona_princeps
ENSVPAG00000008469CPSF67382.443ENSODEG00000007109-6680.576Octodon_degus
ENSVPAG00000008469CPSF67799.194ENSODEG00000004418-9098.795Octodon_degus
ENSVPAG00000008469CPSF65953.030ENSODEG00000002610CPSF76755.618Octodon_degus
ENSVPAG00000008469CPSF610091.388ENSODEG00000018399-9691.388Octodon_degus
ENSVPAG00000008469CPSF67484.231ENSONIG00000011702cpsf68583.784Oreochromis_niloticus
ENSVPAG00000008469CPSF6100100.000ENSOCUG00000013505CPSF697100.000Oryctolagus_cuniculus
ENSVPAG00000008469CPSF67049.537ENSOCUG00000024726CPSF76755.429Oryctolagus_cuniculus
ENSVPAG00000008469CPSF67035.931ENSORLG00000006495CPSF75943.939Oryzias_latipes
ENSVPAG00000008469CPSF66936.087ENSORLG00020012657CPSF76141.667Oryzias_latipes_hni
ENSVPAG00000008469CPSF66837.799ENSOMEG00000000539CPSF77037.267Oryzias_melastigma
ENSVPAG00000008469CPSF65955.385ENSOGAG00000027958CPSF76256.000Otolemur_garnettii
ENSVPAG00000008469CPSF610091.037ENSOGAG00000031988CPSF69991.037Otolemur_garnettii
ENSVPAG00000008469CPSF65955.385ENSOARG00000012937CPSF76155.429Ovis_aries
ENSVPAG00000008469CPSF610099.649ENSOARG00000020532CPSF610099.813Ovis_aries
ENSVPAG00000008469CPSF65954.872ENSPPAG00000028232CPSF76955.429Pan_paniscus
ENSVPAG00000008469CPSF610097.188ENSPPAG00000005301CPSF69897.188Pan_paniscus
ENSVPAG00000008469CPSF610099.824ENSPPRG00000021620CPSF69799.824Panthera_pardus
ENSVPAG00000008469CPSF65955.385ENSPPRG00000008538CPSF76756.000Panthera_pardus
ENSVPAG00000008469CPSF65955.385ENSPTIG00000021699CPSF76756.000Panthera_tigris_altaica
ENSVPAG00000008469CPSF69499.813ENSPTIG00000004079CPSF610099.813Panthera_tigris_altaica
ENSVPAG00000008469CPSF610099.824ENSPTRG00000005205CPSF69799.824Pan_troglodytes
ENSVPAG00000008469CPSF65954.872ENSPTRG00000003742CPSF76955.429Pan_troglodytes
ENSVPAG00000008469CPSF65954.872ENSPANG00000006037CPSF76855.429Papio_anubis
ENSVPAG00000008469CPSF6100100.000ENSPANG00000011641CPSF697100.000Papio_anubis
ENSVPAG00000008469CPSF65547.458ENSPKIG00000018054CPSF76647.205Paramormyrops_kingsleyae
ENSVPAG00000008469CPSF65894.512ENSPSIG00000016360CPSF67694.512Pelodiscus_sinensis
ENSVPAG00000008469CPSF610099.824ENSPEMG00000007973Cpsf610099.824Peromyscus_maniculatus_bairdii
ENSVPAG00000008469CPSF66255.385ENSPEMG00000012648Cpsf77356.000Peromyscus_maniculatus_bairdii
ENSVPAG00000008469CPSF610099.296ENSPCIG00000019063CPSF69799.296Phascolarctos_cinereus
ENSVPAG00000008469CPSF66346.262ENSPCIG00000002551CPSF77955.191Phascolarctos_cinereus
ENSVPAG00000008469CPSF68284.706ENSPFOG00000006990cpsf65381.853Poecilia_formosa
ENSVPAG00000008469CPSF65372.697ENSPMEG00000001353cpsf65069.333Poecilia_mexicana
ENSVPAG00000008469CPSF65954.872ENSPPYG00000003188CPSF76755.429Pongo_abelii
ENSVPAG00000008469CPSF610093.310ENSPPYG00000004756CPSF69693.310Pongo_abelii
ENSVPAG00000008469CPSF6100100.000ENSPCAG00000011574CPSF697100.000Procavia_capensis
ENSVPAG00000008469CPSF65955.385ENSPCOG00000011976CPSF76756.000Propithecus_coquereli
ENSVPAG00000008469CPSF610099.649ENSPCOG00000024384CPSF69799.649Propithecus_coquereli
ENSVPAG00000008469CPSF65955.385ENSPVAG00000010675CPSF76756.000Pteropus_vampyrus
ENSVPAG00000008469CPSF610099.472ENSPVAG00000015753CPSF69799.472Pteropus_vampyrus
ENSVPAG00000008469CPSF65346.497ENSPNAG00000015073CPSF76846.061Pygocentrus_nattereri
ENSVPAG00000008469CPSF66254.872ENSRNOG00000020668Cpsf77355.814Rattus_norvegicus
ENSVPAG00000008469CPSF610093.310ENSRNOG00000005927Cpsf69693.310Rattus_norvegicus
ENSVPAG00000008469CPSF610099.649ENSRBIG00000042827CPSF69799.649Rhinopithecus_bieti
ENSVPAG00000008469CPSF66254.872ENSRBIG00000031429CPSF78654.857Rhinopithecus_bieti
ENSVPAG00000008469CPSF610099.824ENSRROG00000042758CPSF69799.824Rhinopithecus_roxellana
ENSVPAG00000008469CPSF65954.872ENSRROG00000045009CPSF76755.429Rhinopithecus_roxellana
ENSVPAG00000008469CPSF610099.824ENSSBOG00000010652CPSF6100100.000Saimiri_boliviensis_boliviensis
ENSVPAG00000008469CPSF65954.872ENSSBOG00000018431CPSF76755.429Saimiri_boliviensis_boliviensis
ENSVPAG00000008469CPSF66842.157ENSSFOG00015010288cpsf77339.888Scleropages_formosus
ENSVPAG00000008469CPSF69592.737ENSSARG00000006743CPSF69192.737Sorex_araneus
ENSVPAG00000008469CPSF65956.250ENSSPUG00000019344CPSF76956.977Sphenodon_punctatus
ENSVPAG00000008469CPSF6100100.000ENSSSCG00000038031CPSF6100100.000Sus_scrofa
ENSVPAG00000008469CPSF65955.385ENSSSCG00000013083CPSF77955.429Sus_scrofa
ENSVPAG00000008469CPSF65751.111ENSTGUG00000006513CPSF76756.322Taeniopygia_guttata
ENSVPAG00000008469CPSF65955.385ENSUAMG00000017809CPSF76756.000Ursus_americanus
ENSVPAG00000008469CPSF69493.097ENSUAMG00000023492CPSF610093.097Ursus_americanus
ENSVPAG00000008469CPSF694100.000ENSUMAG00000020779CPSF6100100.000Ursus_maritimus
ENSVPAG00000008469CPSF66255.385ENSUMAG00000011825CPSF77356.000Ursus_maritimus
ENSVPAG00000008469CPSF694100.000ENSVVUG00000010156-100100.000Vulpes_vulpes
ENSVPAG00000008469CPSF65955.385ENSVVUG00000004939CPSF77955.429Vulpes_vulpes
ENSVPAG00000008469CPSF69738.929ENSXETG00000006715cpsf76253.571Xenopus_tropicalis

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us