EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000008842 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 16175 bases
Position: chrGeneScaffold_3071:25-16199
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000008227	RNA_pol_Rpb1_5	PF04998.17	5.8e-74	1	2
ENSVPAP00000008227	RNA_pol_Rpb1_5	PF04998.17	5.8e-74	2	2
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	1	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	2	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	3	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	4	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	5	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	6	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	7	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	8	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	9	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	10	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	11	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	12	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	13	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	14	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	15	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	16	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	17	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	18	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	19	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	20	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	21	22
ENSVPAP00000008227	RNA_pol_Rpb1_R	PF05001.13	3.4e-25	22	22
ENSVPAP00000008227	RNA_pol_Rpb1_2	PF00623.20	5.2e-36	1	1
ENSVPAP00000008227	RNA_pol_Rpb1_3	PF04983.18	4.5e-50	1	1
ENSVPAP00000008227	RNA_pol_Rpb1_7	PF04990.12	3.4e-08	1	1
ENSVPAP00000008227	RNA_pol_Rpb1_6	PF04992.14	2.1e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000008843	-	4275	-	ENSVPAP00000008227	1425 (aa)	-	UPI00018BC56C

Gene Model

Click here to download ENSVPAG00000008842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000008842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000008842	-	56	98.370	ENSAPOG00000006552	polr2a	62	98.370	Acanthochromis_polyacanthus
ENSVPAG00000008842	-	76	100.000	ENSAMEG00000016265	-	65	100.000	Ailuropoda_melanoleuca
ENSVPAG00000008842	-	76	97.826	ENSACIG00000015982	polr2a	61	97.826	Amphilophus_citrinellus
ENSVPAG00000008842	-	75	98.370	ENSAOCG00000004255	polr2a	62	98.370	Amphiprion_ocellaris
ENSVPAG00000008842	-	76	98.370	ENSAPEG00000012623	polr2a	65	98.370	Amphiprion_percula
ENSVPAG00000008842	-	76	98.370	ENSATEG00000019644	polr2a	65	98.370	Anabas_testudineus
ENSVPAG00000008842	-	76	100.000	ENSACAG00000014561	POLR2A	65	100.000	Anolis_carolinensis
ENSVPAG00000008842	-	76	100.000	ENSANAG00000020093	-	65	100.000	Aotus_nancymaae
ENSVPAG00000008842	-	76	98.370	ENSACLG00000006735	polr2a	65	98.370	Astatotilapia_calliptera
ENSVPAG00000008842	-	76	98.370	ENSAMXG00000020046	polr2a	65	98.370	Astyanax_mexicanus
ENSVPAG00000008842	-	76	100.000	ENSBTAG00000046765	POLR2A	65	100.000	Bos_taurus
ENSVPAG00000008842	-	76	75.748	WBGene00000123	ama-1	62	75.748	Caenorhabditis_elegans
ENSVPAG00000008842	-	76	100.000	ENSCAFG00000016532	POLR2A	66	100.000	Canis_familiaris
ENSVPAG00000008842	-	74	100.000	ENSCAFG00020007929	-	65	100.000	Canis_lupus_dingo
ENSVPAG00000008842	-	76	100.000	ENSCHIG00000027173	-	65	100.000	Capra_hircus
ENSVPAG00000008842	-	76	100.000	ENSTSYG00000012803	-	61	100.000	Carlito_syrichta
ENSVPAG00000008842	-	76	100.000	ENSCAPG00000001882	-	64	100.000	Cavia_aperea
ENSVPAG00000008842	-	76	100.000	ENSCPOG00000014812	-	63	100.000	Cavia_porcellus
ENSVPAG00000008842	-	76	100.000	ENSCCAG00000020938	-	65	100.000	Cebus_capucinus
ENSVPAG00000008842	-	76	100.000	ENSCATG00000013680	-	65	100.000	Cercocebus_atys
ENSVPAG00000008842	-	76	100.000	ENSCLAG00000012196	-	65	100.000	Chinchilla_lanigera
ENSVPAG00000008842	-	75	97.342	ENSCSAG00000011644	-	65	97.342	Chlorocebus_sabaeus
ENSVPAG00000008842	-	76	96.346	ENSCPBG00000012697	POLR2A	64	96.346	Chrysemys_picta_bellii
ENSVPAG00000008842	-	73	78.378	ENSCING00000007884	-	57	78.378	Ciona_intestinalis
ENSVPAG00000008842	-	75	77.297	ENSCSAVG00000008334	-	58	96.000	Ciona_savignyi
ENSVPAG00000008842	-	76	100.000	ENSCANG00000010622	-	65	100.000	Colobus_angolensis_palliatus
ENSVPAG00000008842	-	73	97.810	ENSCGRG00001003538	Polr2a	60	97.810	Cricetulus_griseus_chok1gshd
ENSVPAG00000008842	-	56	100.000	ENSCGRG00000012105	Polr2a	56	100.000	Cricetulus_griseus_crigri
ENSVPAG00000008842	-	76	96.739	ENSCSEG00000002635	polr2a	65	96.739	Cynoglossus_semilaevis
ENSVPAG00000008842	-	76	98.370	ENSCVAG00000005156	polr2a	65	98.370	Cyprinodon_variegatus
ENSVPAG00000008842	-	76	98.370	ENSDARG00000099966	polr2a	65	98.370	Danio_rerio
ENSVPAG00000008842	-	76	100.000	ENSDNOG00000016482	-	65	100.000	Dasypus_novemcinctus
ENSVPAG00000008842	-	76	100.000	ENSDORG00000008667	Polr2a	65	100.000	Dipodomys_ordii
ENSVPAG00000008842	-	76	77.076	FBgn0003277	RpII215	59	77.409	Drosophila_melanogaster
ENSVPAG00000008842	-	75	97.342	ENSETEG00000002540	-	58	97.342	Echinops_telfairi
ENSVPAG00000008842	-	75	91.848	ENSEBUG00000013967	polr2a	58	91.848	Eptatretus_burgeri
ENSVPAG00000008842	-	76	100.000	ENSEASG00005019114	-	65	100.000	Equus_asinus_asinus
ENSVPAG00000008842	-	76	100.000	ENSECAG00000018485	POLR2A	65	100.000	Equus_caballus
ENSVPAG00000008842	-	65	100.000	ENSEEUG00000001154	-	52	100.000	Erinaceus_europaeus
ENSVPAG00000008842	-	76	95.109	ENSELUG00000014284	polr2a	57	95.109	Esox_lucius
ENSVPAG00000008842	-	76	100.000	ENSFDAG00000008287	-	65	100.000	Fukomys_damarensis
ENSVPAG00000008842	-	76	98.370	ENSFHEG00000001768	polr2a	65	98.370	Fundulus_heteroclitus
ENSVPAG00000008842	-	73	96.196	ENSGMOG00000007725	polr2a	58	96.196	Gadus_morhua
ENSVPAG00000008842	-	77	98.370	ENSGAFG00000005389	polr2a	62	98.370	Gambusia_affinis
ENSVPAG00000008842	-	76	97.283	ENSGACG00000019366	polr2a	55	97.283	Gasterosteus_aculeatus
ENSVPAG00000008842	-	76	100.000	ENSGGOG00000014800	-	61	100.000	Gorilla_gorilla
ENSVPAG00000008842	-	76	98.370	ENSHBUG00000018937	polr2a	65	98.370	Haplochromis_burtoni
ENSVPAG00000008842	-	76	100.000	ENSHGLG00000012381	POLR2A	65	100.000	Heterocephalus_glaber_female
ENSVPAG00000008842	-	76	100.000	ENSHGLG00100014843	POLR2A	65	100.000	Heterocephalus_glaber_male
ENSVPAG00000008842	-	76	97.826	ENSHCOG00000011874	polr2a	65	97.826	Hippocampus_comes
ENSVPAG00000008842	-	76	97.283	ENSIPUG00000002613	Polr2a	65	97.283	Ictalurus_punctatus
ENSVPAG00000008842	-	76	100.000	ENSSTOG00000001304	-	65	100.000	Ictidomys_tridecemlineatus
ENSVPAG00000008842	-	76	100.000	ENSJJAG00000013049	Polr2a	65	100.000	Jaculus_jaculus
ENSVPAG00000008842	-	76	98.370	ENSLBEG00000027652	polr2a	65	98.370	Labrus_bergylta
ENSVPAG00000008842	-	71	95.017	ENSLACG00000012071	POLR2A	66	95.017	Latimeria_chalumnae
ENSVPAG00000008842	-	75	98.370	ENSLOCG00000013863	polr2a	61	98.370	Lepisosteus_oculatus
ENSVPAG00000008842	-	76	100.000	ENSLAFG00000008626	-	65	100.000	Loxodonta_africana
ENSVPAG00000008842	-	76	100.000	ENSMMUG00000023620	-	65	100.000	Macaca_mulatta
ENSVPAG00000008842	-	76	100.000	ENSMNEG00000040407	-	66	100.000	Macaca_nemestrina
ENSVPAG00000008842	-	72	100.000	ENSMLEG00000030263	-	63	100.000	Mandrillus_leucophaeus
ENSVPAG00000008842	-	76	98.370	ENSMAMG00000003351	polr2a	65	98.370	Mastacembelus_armatus
ENSVPAG00000008842	-	76	98.370	ENSMZEG00005021429	polr2a	65	98.370	Maylandia_zebra
ENSVPAG00000008842	-	76	100.000	ENSMICG00000013372	-	65	100.000	Microcebus_murinus
ENSVPAG00000008842	-	76	97.342	ENSMOCG00000018279	Polr2a	63	97.342	Microtus_ochrogaster
ENSVPAG00000008842	-	76	96.739	ENSMMOG00000012515	polr2a	65	96.739	Mola_mola
ENSVPAG00000008842	-	76	100.000	ENSMODG00000007009	-	65	100.000	Monodelphis_domestica
ENSVPAG00000008842	-	76	98.370	ENSMALG00000008716	polr2a	63	98.370	Monopterus_albus
ENSVPAG00000008842	-	76	100.000	MGP_CAROLIEiJ_G0016587	Polr2a	65	100.000	Mus_caroli
ENSVPAG00000008842	-	76	100.000	ENSMUSG00000005198	Polr2a	65	100.000	Mus_musculus
ENSVPAG00000008842	-	75	98.204	MGP_PahariEiJ_G0017718	Polr2a	65	98.204	Mus_pahari
ENSVPAG00000008842	-	76	100.000	MGP_SPRETEiJ_G0017423	Polr2a	65	100.000	Mus_spretus
ENSVPAG00000008842	-	76	100.000	ENSMPUG00000009648	-	65	100.000	Mustela_putorius_furo
ENSVPAG00000008842	-	76	100.000	ENSMLUG00000009088	-	65	100.000	Myotis_lucifugus
ENSVPAG00000008842	-	76	100.000	ENSNGAG00000002543	Polr2a	65	100.000	Nannospalax_galili
ENSVPAG00000008842	-	76	98.370	ENSNBRG00000002005	polr2a	61	98.370	Neolamprologus_brichardi
ENSVPAG00000008842	-	76	100.000	ENSNLEG00000009460	-	61	100.000	Nomascus_leucogenys
ENSVPAG00000008842	-	56	100.000	ENSOPRG00000015116	-	51	100.000	Ochotona_princeps
ENSVPAG00000008842	-	76	100.000	ENSODEG00000017674	-	63	100.000	Octodon_degus
ENSVPAG00000008842	-	76	98.370	ENSONIG00000009231	polr2a	65	98.370	Oreochromis_niloticus
ENSVPAG00000008842	-	77	100.000	ENSOCUG00000017929	-	66	100.000	Oryctolagus_cuniculus
ENSVPAG00000008842	-	76	98.370	ENSORLG00000006431	polr2a	65	98.370	Oryzias_latipes
ENSVPAG00000008842	-	76	98.370	ENSORLG00020010235	polr2a	65	98.370	Oryzias_latipes_hni
ENSVPAG00000008842	-	76	98.370	ENSORLG00015007075	polr2a	65	98.370	Oryzias_latipes_hsok
ENSVPAG00000008842	-	75	98.370	ENSOMEG00000010713	polr2a	56	98.370	Oryzias_melastigma
ENSVPAG00000008842	-	76	100.000	ENSOGAG00000033608	-	62	100.000	Otolemur_garnettii
ENSVPAG00000008842	-	76	100.000	ENSOARG00000013874	-	64	100.000	Ovis_aries
ENSVPAG00000008842	-	76	100.000	ENSPPAG00000043734	-	63	100.000	Pan_paniscus
ENSVPAG00000008842	-	76	100.000	ENSPTRG00000008691	POLR2A	61	100.000	Pan_troglodytes
ENSVPAG00000008842	-	76	100.000	ENSPANG00000024099	-	65	100.000	Papio_anubis
ENSVPAG00000008842	-	71	95.349	ENSPSIG00000014006	POLR2A	59	95.349	Pelodiscus_sinensis
ENSVPAG00000008842	-	77	97.826	ENSPMGG00000019734	polr2a	57	97.826	Periophthalmus_magnuspinnatus
ENSVPAG00000008842	-	76	100.000	ENSPEMG00000012521	Polr2a	65	100.000	Peromyscus_maniculatus_bairdii
ENSVPAG00000008842	-	76	98.370	ENSPFOG00000007890	polr2a	64	98.370	Poecilia_formosa
ENSVPAG00000008842	-	76	98.370	ENSPLAG00000007399	polr2a	64	98.370	Poecilia_latipinna
ENSVPAG00000008842	-	76	98.370	ENSPMEG00000002071	polr2a	64	98.370	Poecilia_mexicana
ENSVPAG00000008842	-	76	98.370	ENSPREG00000013122	polr2a	65	98.370	Poecilia_reticulata
ENSVPAG00000008842	-	76	100.000	ENSPPYG00000007924	-	65	100.000	Pongo_abelii
ENSVPAG00000008842	-	70	99.457	ENSPCAG00000006951	-	61	99.457	Procavia_capensis
ENSVPAG00000008842	-	76	100.000	ENSPCOG00000025260	-	64	100.000	Propithecus_coquereli
ENSVPAG00000008842	-	76	98.913	ENSPVAG00000005069	-	65	98.913	Pteropus_vampyrus
ENSVPAG00000008842	-	76	98.370	ENSPNYG00000022340	polr2a	65	98.370	Pundamilia_nyererei
ENSVPAG00000008842	-	76	98.370	ENSPNAG00000011237	polr2a	65	98.370	Pygocentrus_nattereri
ENSVPAG00000008842	-	76	100.000	ENSRNOG00000028834	Polr2a	66	100.000	Rattus_norvegicus
ENSVPAG00000008842	-	76	100.000	ENSRBIG00000002471	-	60	100.000	Rhinopithecus_bieti
ENSVPAG00000008842	-	76	100.000	ENSRROG00000029583	-	65	100.000	Rhinopithecus_roxellana
ENSVPAG00000008842	-	56	51.163	YDL140C	RPO21	56	68.317	Saccharomyces_cerevisiae
ENSVPAG00000008842	-	76	100.000	ENSSBOG00000000808	-	65	100.000	Saimiri_boliviensis_boliviensis
ENSVPAG00000008842	-	76	100.000	ENSSHAG00000002858	-	65	100.000	Sarcophilus_harrisii
ENSVPAG00000008842	-	76	97.826	ENSSFOG00015023275	polr2a	65	97.826	Scleropages_formosus
ENSVPAG00000008842	-	76	97.826	ENSSMAG00000009137	polr2a	65	97.826	Scophthalmus_maximus
ENSVPAG00000008842	-	76	98.370	ENSSDUG00000020466	polr2a	65	98.370	Seriola_dumerili
ENSVPAG00000008842	-	76	98.370	ENSSLDG00000020613	polr2a	65	98.370	Seriola_lalandi_dorsalis
ENSVPAG00000008842	-	71	97.342	ENSSARG00000005875	-	58	97.342	Sorex_araneus
ENSVPAG00000008842	-	75	98.370	ENSSPAG00000016741	polr2a	56	98.370	Stegastes_partitus
ENSVPAG00000008842	-	74	96.013	ENSSSCG00000028278	-	65	96.013	Sus_scrofa
ENSVPAG00000008842	-	76	97.283	ENSTNIG00000010136	polr2a	57	97.283	Tetraodon_nigroviridis
ENSVPAG00000008842	-	74	100.000	ENSTTRG00000014273	-	65	100.000	Tursiops_truncatus
ENSVPAG00000008842	-	76	97.010	ENSUAMG00000014866	-	63	97.010	Ursus_americanus
ENSVPAG00000008842	-	76	97.143	ENSUMAG00000015732	-	66	97.143	Ursus_maritimus
ENSVPAG00000008842	-	76	100.000	ENSVVUG00000027878	-	65	100.000	Vulpes_vulpes
ENSVPAG00000008842	-	76	98.913	ENSXETG00000012465	polr2a	64	98.913	Xenopus_tropicalis
ENSVPAG00000008842	-	66	98.370	ENSXCOG00000001804	polr2a	57	98.370	Xiphophorus_couchianus
ENSVPAG00000008842	-	76	98.370	ENSXMAG00000015687	polr2a	65	98.370	Xiphophorus_maculatus