EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000008968 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 152960 bases
Position: chrGeneScaffold_1697:42153-195112
Accession: 8609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000008342	R3H	PF01424.22	1.8e-05	1	1
ENSVPAP00000008342	RNA_bind	PF08675.11	8e-34	1	1
ENSVPAP00000008342	CAF1	PF04857.20	8.6e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000008968	PARN-201	1842	-	ENSVPAP00000008342	614 (aa)	-	UPI00018BD230

Gene Model

Click here to download ENSVPAG00000008968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000008968's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000008968	PARN	100	89.902	ENSG00000140694	PARN	95	98.077	Homo_sapiens
ENSVPAG00000008968	PARN	100	90.569	ENSAMEG00000011208	PARN	96	90.569	Ailuropoda_melanoleuca
ENSVPAG00000008968	PARN	85	72.779	ENSACIG00000000619	parn	82	72.779	Amphilophus_citrinellus
ENSVPAG00000008968	PARN	93	69.931	ENSAOCG00000003465	parn	81	69.931	Amphiprion_ocellaris
ENSVPAG00000008968	PARN	77	74.207	ENSAPEG00000010661	parn	91	74.207	Amphiprion_percula
ENSVPAG00000008968	PARN	93	71.404	ENSATEG00000004661	parn	82	71.404	Anabas_testudineus
ENSVPAG00000008968	PARN	97	83.165	ENSAPLG00000013914	PARN	94	82.609	Anas_platyrhynchos
ENSVPAG00000008968	PARN	93	80.977	ENSACAG00000004973	PARN	90	79.626	Anolis_carolinensis
ENSVPAG00000008968	PARN	100	88.925	ENSANAG00000031516	PARN	95	98.077	Aotus_nancymaae
ENSVPAG00000008968	PARN	93	71.034	ENSACLG00000004742	parn	83	71.034	Astatotilapia_calliptera
ENSVPAG00000008968	PARN	92	71.555	ENSAMXG00000012390	parn	93	67.869	Astyanax_mexicanus
ENSVPAG00000008968	PARN	100	91.694	ENSBTAG00000018097	PARN	97	90.893	Bos_taurus
ENSVPAG00000008968	PARN	100	89.414	ENSCJAG00000015866	PARN	95	98.077	Callithrix_jacchus
ENSVPAG00000008968	PARN	100	90.717	ENSCAFG00000018795	PARN	96	90.717	Canis_familiaris
ENSVPAG00000008968	PARN	100	90.717	ENSCAFG00020024126	PARN	96	90.717	Canis_lupus_dingo
ENSVPAG00000008968	PARN	100	91.694	ENSCHIG00000018143	PARN	96	91.694	Capra_hircus
ENSVPAG00000008968	PARN	76	59.129	ENSCAPG00000007984	PARN	78	59.129	Cavia_aperea
ENSVPAG00000008968	PARN	97	87.793	ENSCPOG00000002263	PARN	94	87.793	Cavia_porcellus
ENSVPAG00000008968	PARN	100	89.739	ENSCCAG00000030367	PARN	95	98.077	Cebus_capucinus
ENSVPAG00000008968	PARN	90	93.004	ENSCATG00000041368	PARN	94	98.077	Cercocebus_atys
ENSVPAG00000008968	PARN	53	37.226	ENSCATG00000033196	PNLDC1	68	37.226	Cercocebus_atys
ENSVPAG00000008968	PARN	99	88.072	ENSCLAG00000015406	PARN	96	88.072	Chinchilla_lanigera
ENSVPAG00000008968	PARN	100	90.391	ENSCSAG00000008142	PARN	96	90.391	Chlorocebus_sabaeus
ENSVPAG00000008968	PARN	100	79.642	ENSCHOG00000007014	PARN	97	79.642	Choloepus_hoffmanni
ENSVPAG00000008968	PARN	91	81.607	ENSCPBG00000006609	PARN	97	81.607	Chrysemys_picta_bellii
ENSVPAG00000008968	PARN	82	42.476	ENSCING00000010142	-	98	42.476	Ciona_intestinalis
ENSVPAG00000008968	PARN	100	77.251	ENSCANG00000028849	-	94	98.077	Colobus_angolensis_palliatus
ENSVPAG00000008968	PARN	97	82.167	ENSCGRG00001012096	Parn	96	82.114	Cricetulus_griseus_chok1gshd
ENSVPAG00000008968	PARN	50	35.338	ENSCGRG00001011981	-	62	35.338	Cricetulus_griseus_chok1gshd
ENSVPAG00000008968	PARN	97	82.167	ENSCGRG00000004939	Parn	96	82.114	Cricetulus_griseus_crigri
ENSVPAG00000008968	PARN	98	66.831	ENSCSEG00000002064	parn	96	64.019	Cynoglossus_semilaevis
ENSVPAG00000008968	PARN	93	70.415	ENSCVAG00000014848	parn	82	70.415	Cyprinodon_variegatus
ENSVPAG00000008968	PARN	93	67.838	ENSDARG00000102634	parn	96	60.185	Danio_rerio
ENSVPAG00000008968	PARN	97	90.970	ENSDNOG00000000833	PARN	97	91.621	Dasypus_novemcinctus
ENSVPAG00000008968	PARN	76	93.359	ENSETEG00000014828	-	76	93.359	Echinops_telfairi
ENSVPAG00000008968	PARN	100	91.042	ENSEASG00005011400	PARN	96	91.042	Equus_asinus_asinus
ENSVPAG00000008968	PARN	100	90.879	ENSECAG00000017792	PARN	96	90.879	Equus_caballus
ENSVPAG00000008968	PARN	86	83.962	ENSEEUG00000010370	PARN	83	83.962	Erinaceus_europaeus
ENSVPAG00000008968	PARN	93	70.455	ENSELUG00000013139	parn	74	70.455	Esox_lucius
ENSVPAG00000008968	PARN	100	91.531	ENSFCAG00000044961	PARN	95	98.077	Felis_catus
ENSVPAG00000008968	PARN	97	81.910	ENSFALG00000003911	PARN	93	81.773	Ficedula_albicollis
ENSVPAG00000008968	PARN	100	86.971	ENSFDAG00000009234	PARN	96	86.971	Fukomys_damarensis
ENSVPAG00000008968	PARN	94	63.636	ENSFHEG00000013738	parn	81	78.846	Fundulus_heteroclitus
ENSVPAG00000008968	PARN	85	72.779	ENSGMOG00000003231	parn	96	72.779	Gadus_morhua
ENSVPAG00000008968	PARN	99	80.656	ENSGALG00000003091	PARN	93	82.125	Gallus_gallus
ENSVPAG00000008968	PARN	93	70.466	ENSGAFG00000011061	parn	83	69.779	Gambusia_affinis
ENSVPAG00000008968	PARN	95	68.136	ENSGACG00000019501	parn	91	68.136	Gasterosteus_aculeatus
ENSVPAG00000008968	PARN	53	79.385	ENSGAGG00000023281	PARN	83	79.385	Gopherus_agassizii
ENSVPAG00000008968	PARN	100	89.577	ENSGGOG00000025224	PARN	98	98.077	Gorilla_gorilla
ENSVPAG00000008968	PARN	93	71.034	ENSHBUG00000017906	parn	89	73.585	Haplochromis_burtoni
ENSVPAG00000008968	PARN	100	86.482	ENSHGLG00000010886	PARN	96	86.482	Heterocephalus_glaber_female
ENSVPAG00000008968	PARN	100	86.482	ENSHGLG00100014659	PARN	96	86.482	Heterocephalus_glaber_male
ENSVPAG00000008968	PARN	85	70.510	ENSHCOG00000008683	parn	91	70.510	Hippocampus_comes
ENSVPAG00000008968	PARN	92	60.247	ENSIPUG00000012401	parn	83	60.247	Ictalurus_punctatus
ENSVPAG00000008968	PARN	99	88.889	ENSSTOG00000007519	PARN	96	88.889	Ictidomys_tridecemlineatus
ENSVPAG00000008968	PARN	99	85.458	ENSJJAG00000023049	Parn	96	85.458	Jaculus_jaculus
ENSVPAG00000008968	PARN	93	70.884	ENSKMAG00000009462	parn	82	70.884	Kryptolebias_marmoratus
ENSVPAG00000008968	PARN	93	69.913	ENSLBEG00000009167	parn	88	69.913	Labrus_bergylta
ENSVPAG00000008968	PARN	82	75.547	ENSLACG00000004207	PARN	98	73.861	Latimeria_chalumnae
ENSVPAG00000008968	PARN	95	72.774	ENSLOCG00000000715	parn	84	72.461	Lepisosteus_oculatus
ENSVPAG00000008968	PARN	100	89.414	ENSLAFG00000015036	PARN	96	89.414	Loxodonta_africana
ENSVPAG00000008968	PARN	100	86.319	ENSMFAG00000044852	PARN	95	98.077	Macaca_fascicularis
ENSVPAG00000008968	PARN	100	90.065	ENSMMUG00000018849	PARN	95	98.077	Macaca_mulatta
ENSVPAG00000008968	PARN	100	90.228	ENSMNEG00000045108	PARN	95	98.077	Macaca_nemestrina
ENSVPAG00000008968	PARN	100	90.065	ENSMLEG00000031743	PARN	95	98.077	Mandrillus_leucophaeus
ENSVPAG00000008968	PARN	93	69.811	ENSMAMG00000006939	parn	81	69.811	Mastacembelus_armatus
ENSVPAG00000008968	PARN	93	71.034	ENSMZEG00005013590	parn	89	73.346	Maylandia_zebra
ENSVPAG00000008968	PARN	93	81.930	ENSMGAG00000001004	PARN	89	81.930	Meleagris_gallopavo
ENSVPAG00000008968	PARN	99	76.404	ENSMAUG00000008025	Parn	96	76.404	Mesocricetus_auratus
ENSVPAG00000008968	PARN	53	34.532	ENSMAUG00000012298	Pnldc1	67	34.532	Mesocricetus_auratus
ENSVPAG00000008968	PARN	100	90.391	ENSMICG00000016053	PARN	95	100.000	Microcebus_murinus
ENSVPAG00000008968	PARN	79	87.064	ENSMOCG00000022211	Parn	99	87.064	Microtus_ochrogaster
ENSVPAG00000008968	PARN	85	72.917	ENSMMOG00000011333	parn	86	72.917	Mola_mola
ENSVPAG00000008968	PARN	79	90.184	ENSMODG00000004915	PARN	98	90.184	Monodelphis_domestica
ENSVPAG00000008968	PARN	85	75.425	ENSMALG00000019426	parn	89	75.425	Monopterus_albus
ENSVPAG00000008968	PARN	99	82.843	MGP_CAROLIEiJ_G0020466	Parn	96	82.843	Mus_caroli
ENSVPAG00000008968	PARN	99	82.843	ENSMUSG00000022685	Parn	91	93.333	Mus_musculus
ENSVPAG00000008968	PARN	99	82.680	MGP_PahariEiJ_G0016172	Parn	96	82.680	Mus_pahari
ENSVPAG00000008968	PARN	99	83.170	MGP_SPRETEiJ_G0021361	Parn	96	83.170	Mus_spretus
ENSVPAG00000008968	PARN	100	90.879	ENSMPUG00000014464	PARN	96	90.879	Mustela_putorius_furo
ENSVPAG00000008968	PARN	79	89.938	ENSMLUG00000005414	PARN	99	89.938	Myotis_lucifugus
ENSVPAG00000008968	PARN	85	73.055	ENSNBRG00000006805	parn	89	73.055	Neolamprologus_brichardi
ENSVPAG00000008968	PARN	100	89.902	ENSNLEG00000010241	PARN	95	98.077	Nomascus_leucogenys
ENSVPAG00000008968	PARN	100	58.632	ENSMEUG00000008178	-	97	58.632	Notamacropus_eugenii
ENSVPAG00000008968	PARN	100	83.062	ENSOPRG00000012187	PARN	97	83.062	Ochotona_princeps
ENSVPAG00000008968	PARN	97	79.000	ENSODEG00000001617	PARN	93	78.869	Octodon_degus
ENSVPAG00000008968	PARN	93	71.207	ENSONIG00000000151	parn	82	75.376	Oreochromis_niloticus
ENSVPAG00000008968	PARN	51	84.591	ENSOANG00000020155	-	82	84.906	Ornithorhynchus_anatinus
ENSVPAG00000008968	PARN	100	88.925	ENSOCUG00000000322	PARN	97	88.925	Oryctolagus_cuniculus
ENSVPAG00000008968	PARN	97	67.496	ENSORLG00020010313	parn	87	67.496	Oryzias_latipes_hni
ENSVPAG00000008968	PARN	97	67.496	ENSORLG00015000300	parn	87	67.496	Oryzias_latipes_hsok
ENSVPAG00000008968	PARN	93	70.191	ENSOMEG00000019555	parn	94	66.822	Oryzias_melastigma
ENSVPAG00000008968	PARN	79	88.730	ENSOGAG00000014626	PARN	99	88.730	Otolemur_garnettii
ENSVPAG00000008968	PARN	79	92.813	ENSOARG00000007574	PARN	99	92.813	Ovis_aries
ENSVPAG00000008968	PARN	100	89.577	ENSPPAG00000031438	PARN	95	98.077	Pan_paniscus
ENSVPAG00000008968	PARN	100	91.531	ENSPPRG00000018583	PARN	95	98.077	Panthera_pardus
ENSVPAG00000008968	PARN	100	91.368	ENSPTIG00000012135	PARN	95	98.077	Panthera_tigris_altaica
ENSVPAG00000008968	PARN	100	89.577	ENSPTRG00000007792	PARN	95	98.077	Pan_troglodytes
ENSVPAG00000008968	PARN	100	86.808	ENSPANG00000020099	PARN	95	98.077	Papio_anubis
ENSVPAG00000008968	PARN	94	71.354	ENSPKIG00000022807	parn	94	65.132	Paramormyrops_kingsleyae
ENSVPAG00000008968	PARN	100	81.433	ENSPSIG00000014804	PARN	97	80.714	Pelodiscus_sinensis
ENSVPAG00000008968	PARN	82	73.570	ENSPMGG00000014431	parn	76	70.567	Periophthalmus_magnuspinnatus
ENSVPAG00000008968	PARN	99	83.007	ENSPEMG00000018439	Parn	96	83.007	Peromyscus_maniculatus_bairdii
ENSVPAG00000008968	PARN	82	64.764	ENSPMAG00000003956	parn	96	64.764	Petromyzon_marinus
ENSVPAG00000008968	PARN	68	82.212	ENSPCIG00000001259	PARN	80	94.231	Phascolarctos_cinereus
ENSVPAG00000008968	PARN	93	70.364	ENSPFOG00000012823	parn	83	69.506	Poecilia_formosa
ENSVPAG00000008968	PARN	93	70.364	ENSPLAG00000006395	parn	83	69.506	Poecilia_latipinna
ENSVPAG00000008968	PARN	93	70.537	ENSPMEG00000007711	parn	82	70.466	Poecilia_mexicana
ENSVPAG00000008968	PARN	93	70.017	ENSPREG00000000147	parn	82	69.948	Poecilia_reticulata
ENSVPAG00000008968	PARN	100	89.286	ENSPPYG00000007123	PARN	96	89.286	Pongo_abelii
ENSVPAG00000008968	PARN	93	85.140	ENSPCAG00000001741	PARN	97	85.324	Procavia_capensis
ENSVPAG00000008968	PARN	100	87.948	ENSPCOG00000019292	PARN	95	100.000	Propithecus_coquereli
ENSVPAG00000008968	PARN	100	87.134	ENSPVAG00000002547	PARN	97	87.134	Pteropus_vampyrus
ENSVPAG00000008968	PARN	93	71.034	ENSPNYG00000006835	parn	89	73.585	Pundamilia_nyererei
ENSVPAG00000008968	PARN	86	71.078	ENSPNAG00000018905	parn	84	71.347	Pygocentrus_nattereri
ENSVPAG00000008968	PARN	97	81.987	ENSRNOG00000002912	Parn	98	87.879	Rattus_norvegicus
ENSVPAG00000008968	PARN	51	89.206	ENSRBIG00000018726	PARN	95	89.206	Rhinopithecus_bieti
ENSVPAG00000008968	PARN	51	89.206	ENSRROG00000011162	-	95	89.206	Rhinopithecus_roxellana
ENSVPAG00000008968	PARN	100	87.785	ENSSBOG00000034726	PARN	95	98.077	Saimiri_boliviensis_boliviensis
ENSVPAG00000008968	PARN	68	89.183	ENSSHAG00000008493	PARN	93	89.183	Sarcophilus_harrisii
ENSVPAG00000008968	PARN	99	69.917	ENSSFOG00015014165	parn	91	71.303	Scleropages_formosus
ENSVPAG00000008968	PARN	85	72.779	ENSSMAG00000000685	parn	86	68.037	Scophthalmus_maximus
ENSVPAG00000008968	PARN	93	69.931	ENSSDUG00000014555	parn	82	69.931	Seriola_dumerili
ENSVPAG00000008968	PARN	91	77.540	ENSSARG00000014339	PARN	97	77.540	Sorex_araneus
ENSVPAG00000008968	PARN	97	83.585	ENSSPUG00000007719	PARN	94	83.445	Sphenodon_punctatus
ENSVPAG00000008968	PARN	93	71.848	ENSSPAG00000007095	parn	85	71.157	Stegastes_partitus
ENSVPAG00000008968	PARN	100	91.531	ENSSSCG00000007878	PARN	86	91.531	Sus_scrofa
ENSVPAG00000008968	PARN	97	81.742	ENSTGUG00000004971	PARN	94	81.605	Taeniopygia_guttata
ENSVPAG00000008968	PARN	98	67.488	ENSTNIG00000008252	parn	94	67.822	Tetraodon_nigroviridis
ENSVPAG00000008968	PARN	92	75.445	ENSTBEG00000010407	PARN	97	75.445	Tupaia_belangeri
ENSVPAG00000008968	PARN	100	86.482	ENSTTRG00000002843	PARN	97	86.482	Tursiops_truncatus
ENSVPAG00000008968	PARN	71	78.670	ENSUAMG00000008283	PARN	94	77.752	Ursus_americanus
ENSVPAG00000008968	PARN	100	91.042	ENSUMAG00000004527	PARN	96	91.042	Ursus_maritimus
ENSVPAG00000008968	PARN	100	91.205	ENSVVUG00000019509	PARN	96	91.205	Vulpes_vulpes
ENSVPAG00000008968	PARN	99	74.225	ENSXETG00000010994	parn	99	80.925	Xenopus_tropicalis
ENSVPAG00000008968	PARN	93	66.493	ENSXCOG00000015990	parn	95	65.753	Xiphophorus_couchianus
ENSVPAG00000008968	PARN	94	69.728	ENSXMAG00000014783	parn	83	69.728	Xiphophorus_maculatus