EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVPAG00000008982 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Plus strand
Length: 32862 bases
Position: chrGeneScaffold_2071:11604-44465
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000008355	ResIII	PF04851.15	2.5e-11	1	1
ENSVPAP00000008355	DEAD	PF00270.29	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000008982	SMARCA5-201	3153	-	ENSVPAP00000008355	1050 (aa)	-	UPI00018BD1BF

Gene Model

Click here to download ENSVPAG00000008982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000008982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVPAG00000008982	SMARCA5	72	87.869	ENSVPAG00000010492	-	77	88.927

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000008982	SMARCA5	100	98.194	ENSG00000153147	SMARCA5	100	98.194	Homo_sapiens
ENSVPAG00000008982	SMARCA5	100	98.954	ENSAMEG00000009585	SMARCA5	100	98.954	Ailuropoda_melanoleuca
ENSVPAG00000008982	SMARCA5	91	96.817	ENSAPLG00000009206	SMARCA5	100	96.817	Anas_platyrhynchos
ENSVPAG00000008982	SMARCA5	94	96.475	ENSACAG00000003038	SMARCA5	96	96.289	Anolis_carolinensis
ENSVPAG00000008982	SMARCA5	100	98.099	ENSANAG00000019345	SMARCA5	100	98.099	Aotus_nancymaae
ENSVPAG00000008982	SMARCA5	100	98.669	ENSBTAG00000003399	SMARCA5	100	98.669	Bos_taurus
ENSVPAG00000008982	SMARCA5	100	98.289	ENSCJAG00000002735	SMARCA5	100	98.289	Callithrix_jacchus
ENSVPAG00000008982	SMARCA5	100	98.764	ENSCAFG00000007525	SMARCA5	100	98.764	Canis_familiaris
ENSVPAG00000008982	SMARCA5	98	98.740	ENSCAFG00020025641	SMARCA5	99	98.740	Canis_lupus_dingo
ENSVPAG00000008982	SMARCA5	100	99.049	ENSCHIG00000013730	-	100	99.049	Capra_hircus
ENSVPAG00000008982	SMARCA5	100	97.338	ENSCHIG00000016375	-	100	97.338	Capra_hircus
ENSVPAG00000008982	SMARCA5	96	98.608	ENSTSYG00000009954	SMARCA5	99	99.496	Carlito_syrichta
ENSVPAG00000008982	SMARCA5	92	98.864	ENSCAPG00000013747	SMARCA5	95	98.864	Cavia_aperea
ENSVPAG00000008982	SMARCA5	100	97.719	ENSCPOG00000002259	SMARCA5	100	97.719	Cavia_porcellus
ENSVPAG00000008982	SMARCA5	100	98.289	ENSCCAG00000027215	SMARCA5	100	98.289	Cebus_capucinus
ENSVPAG00000008982	SMARCA5	100	98.289	ENSCATG00000044917	SMARCA5	100	98.289	Cercocebus_atys
ENSVPAG00000008982	SMARCA5	96	97.725	ENSCLAG00000006153	SMARCA5	100	99.194	Chinchilla_lanigera
ENSVPAG00000008982	SMARCA5	92	99.278	ENSCSAG00000003448	SMARCA5	100	99.278	Chlorocebus_sabaeus
ENSVPAG00000008982	SMARCA5	90	98.178	ENSCHOG00000011724	SMARCA5	90	98.178	Choloepus_hoffmanni
ENSVPAG00000008982	SMARCA5	95	98.195	ENSCPBG00000027535	SMARCA5	96	97.998	Chrysemys_picta_bellii
ENSVPAG00000008982	SMARCA5	100	98.099	ENSCANG00000041629	SMARCA5	100	98.099	Colobus_angolensis_palliatus
ENSVPAG00000008982	SMARCA5	99	97.719	ENSCGRG00001012719	Smarca5	99	97.719	Cricetulus_griseus_chok1gshd
ENSVPAG00000008982	SMARCA5	95	99.097	ENSCGRG00000001417	Smarca5	99	99.295	Cricetulus_griseus_crigri
ENSVPAG00000008982	SMARCA5	98	95.358	ENSDNOG00000009158	SMARCA5	97	95.882	Dasypus_novemcinctus
ENSVPAG00000008982	SMARCA5	90	90.612	ENSDORG00000003466	Smarca5	97	90.612	Dipodomys_ordii
ENSVPAG00000008982	SMARCA5	98	81.845	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSVPAG00000008982	SMARCA5	100	98.954	ENSEASG00005001866	SMARCA5	100	98.954	Equus_asinus_asinus
ENSVPAG00000008982	SMARCA5	100	98.954	ENSECAG00000002676	SMARCA5	100	98.954	Equus_caballus
ENSVPAG00000008982	SMARCA5	94	94.965	ENSEEUG00000013176	SMARCA5	100	94.965	Erinaceus_europaeus
ENSVPAG00000008982	SMARCA5	92	89.072	ENSELUG00000014653	SMARCA5	99	89.072	Esox_lucius
ENSVPAG00000008982	SMARCA5	100	98.954	ENSFCAG00000004544	SMARCA5	100	98.954	Felis_catus
ENSVPAG00000008982	SMARCA5	92	97.423	ENSFALG00000004987	SMARCA5	100	97.423	Ficedula_albicollis
ENSVPAG00000008982	SMARCA5	99	95.694	ENSFDAG00000021016	SMARCA5	100	99.396	Fukomys_damarensis
ENSVPAG00000008982	SMARCA5	99	84.756	ENSGMOG00000007519	SMARCA5	94	89.150	Gadus_morhua
ENSVPAG00000008982	SMARCA5	97	96.271	ENSGALG00000009913	SMARCA5	96	97.497	Gallus_gallus
ENSVPAG00000008982	SMARCA5	93	90.481	ENSGACG00000017238	SMARCA5	95	90.481	Gasterosteus_aculeatus
ENSVPAG00000008982	SMARCA5	96	97.340	ENSGAGG00000019882	SMARCA5	96	98.098	Gopherus_agassizii
ENSVPAG00000008982	SMARCA5	100	98.194	ENSGGOG00000012595	SMARCA5	100	98.194	Gorilla_gorilla
ENSVPAG00000008982	SMARCA5	100	97.719	ENSHGLG00000000816	-	99	97.719	Heterocephalus_glaber_female
ENSVPAG00000008982	SMARCA5	96	89.552	ENSHGLG00000000317	-	95	89.479	Heterocephalus_glaber_female
ENSVPAG00000008982	SMARCA5	96	97.725	ENSHGLG00100018421	-	100	99.295	Heterocephalus_glaber_male
ENSVPAG00000008982	SMARCA5	100	98.670	ENSSTOG00000010683	SMARCA5	99	98.670	Ictidomys_tridecemlineatus
ENSVPAG00000008982	SMARCA5	100	97.719	ENSJJAG00000014965	Smarca5	100	97.719	Jaculus_jaculus
ENSVPAG00000008982	SMARCA5	94	95.560	ENSLACG00000007091	SMARCA5	97	95.560	Latimeria_chalumnae
ENSVPAG00000008982	SMARCA5	94	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSVPAG00000008982	SMARCA5	100	98.289	ENSLAFG00000007795	SMARCA5	100	98.289	Loxodonta_africana
ENSVPAG00000008982	SMARCA5	100	98.289	ENSMFAG00000043649	SMARCA5	100	98.289	Macaca_fascicularis
ENSVPAG00000008982	SMARCA5	100	98.289	ENSMMUG00000000829	SMARCA5	100	98.289	Macaca_mulatta
ENSVPAG00000008982	SMARCA5	100	98.289	ENSMNEG00000031916	SMARCA5	100	98.289	Macaca_nemestrina
ENSVPAG00000008982	SMARCA5	100	98.289	ENSMLEG00000042393	SMARCA5	100	98.289	Mandrillus_leucophaeus
ENSVPAG00000008982	SMARCA5	95	97.200	ENSMGAG00000003517	SMARCA5	99	97.200	Meleagris_gallopavo
ENSVPAG00000008982	SMARCA5	94	99.396	ENSMAUG00000015902	Smarca5	98	99.396	Mesocricetus_auratus
ENSVPAG00000008982	SMARCA5	100	98.574	ENSMICG00000003971	SMARCA5	100	98.574	Microcebus_murinus
ENSVPAG00000008982	SMARCA5	99	97.529	ENSMOCG00000016986	-	99	97.529	Microtus_ochrogaster
ENSVPAG00000008982	SMARCA5	100	95.829	ENSMODG00000000391	SMARCA5	95	98.798	Monodelphis_domestica
ENSVPAG00000008982	SMARCA5	100	97.719	ENSMUSG00000031715	Smarca5	100	97.719	Mus_musculus
ENSVPAG00000008982	SMARCA5	100	97.909	MGP_PahariEiJ_G0022862	Smarca5	100	97.909	Mus_pahari
ENSVPAG00000008982	SMARCA5	100	99.144	ENSMLUG00000000468	SMARCA5	100	99.144	Myotis_lucifugus
ENSVPAG00000008982	SMARCA5	100	97.909	ENSNGAG00000000441	Smarca5	100	97.909	Nannospalax_galili
ENSVPAG00000008982	SMARCA5	100	98.289	ENSNLEG00000005383	SMARCA5	100	98.289	Nomascus_leucogenys
ENSVPAG00000008982	SMARCA5	92	91.012	ENSMEUG00000001267	SMARCA5	100	91.012	Notamacropus_eugenii
ENSVPAG00000008982	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSVPAG00000008982	SMARCA5	92	98.865	ENSOANG00000013921	SMARCA5	100	98.865	Ornithorhynchus_anatinus
ENSVPAG00000008982	SMARCA5	92	99.484	ENSOCUG00000013042	SMARCA5	100	99.484	Oryctolagus_cuniculus
ENSVPAG00000008982	SMARCA5	100	98.479	ENSOGAG00000009702	SMARCA5	100	98.479	Otolemur_garnettii
ENSVPAG00000008982	SMARCA5	99	98.763	ENSOARG00000010589	SMARCA5	99	98.763	Ovis_aries
ENSVPAG00000008982	SMARCA5	100	98.099	ENSPPAG00000028523	SMARCA5	100	98.099	Pan_paniscus
ENSVPAG00000008982	SMARCA5	98	93.372	ENSPPRG00000004925	SMARCA5	97	94.510	Panthera_pardus
ENSVPAG00000008982	SMARCA5	96	99.505	ENSPTIG00000020959	SMARCA5	97	99.505	Panthera_tigris_altaica
ENSVPAG00000008982	SMARCA5	100	98.194	ENSPTRG00000016472	SMARCA5	100	98.194	Pan_troglodytes
ENSVPAG00000008982	SMARCA5	100	98.289	ENSPANG00000001175	SMARCA5	100	98.289	Papio_anubis
ENSVPAG00000008982	SMARCA5	93	90.676	ENSPKIG00000015699	SMARCA5	98	89.598	Paramormyrops_kingsleyae
ENSVPAG00000008982	SMARCA5	95	89.300	ENSPKIG00000015885	SMARCA5	100	91.134	Paramormyrops_kingsleyae
ENSVPAG00000008982	SMARCA5	95	96.189	ENSPSIG00000004177	SMARCA5	100	96.189	Pelodiscus_sinensis
ENSVPAG00000008982	SMARCA5	92	89.701	ENSPMGG00000012316	SMARCA5	100	89.701	Periophthalmus_magnuspinnatus
ENSVPAG00000008982	SMARCA5	97	97.544	ENSPEMG00000008060	Smarca5	99	97.544	Peromyscus_maniculatus_bairdii
ENSVPAG00000008982	SMARCA5	61	86.583	ENSPMAG00000008026	SMARCA5	99	86.583	Petromyzon_marinus
ENSVPAG00000008982	SMARCA5	96	69.578	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSVPAG00000008982	SMARCA5	99	96.054	ENSPCIG00000003926	SMARCA5	95	98.798	Phascolarctos_cinereus
ENSVPAG00000008982	SMARCA5	100	98.384	ENSPPYG00000015091	SMARCA5	100	98.384	Pongo_abelii
ENSVPAG00000008982	SMARCA5	86	89.790	ENSPCAG00000014230	SMARCA5	88	90.184	Procavia_capensis
ENSVPAG00000008982	SMARCA5	100	95.913	ENSPCOG00000026744	SMARCA5	100	95.913	Propithecus_coquereli
ENSVPAG00000008982	SMARCA5	99	98.858	ENSPVAG00000006482	SMARCA5	100	98.858	Pteropus_vampyrus
ENSVPAG00000008982	SMARCA5	97	88.235	ENSPNAG00000027824	SMARCA5	97	90.456	Pygocentrus_nattereri
ENSVPAG00000008982	SMARCA5	95	99.196	ENSRNOG00000018149	Smarca5	100	99.196	Rattus_norvegicus
ENSVPAG00000008982	SMARCA5	100	98.101	ENSRBIG00000044644	SMARCA5	100	98.101	Rhinopithecus_bieti
ENSVPAG00000008982	SMARCA5	98	97.967	ENSRROG00000029591	SMARCA5	99	99.195	Rhinopithecus_roxellana
ENSVPAG00000008982	SMARCA5	100	98.384	ENSSBOG00000036257	SMARCA5	100	98.384	Saimiri_boliviensis_boliviensis
ENSVPAG00000008982	SMARCA5	94	98.892	ENSSHAG00000008464	SMARCA5	100	98.892	Sarcophilus_harrisii
ENSVPAG00000008982	SMARCA5	94	90.251	ENSSFOG00015013252	SMARCA5	97	90.251	Scleropages_formosus
ENSVPAG00000008982	SMARCA5	99	92.550	ENSSPUG00000007604	SMARCA5	99	96.482	Sphenodon_punctatus
ENSVPAG00000008982	SMARCA5	100	98.954	ENSSSCG00000009047	SMARCA5	100	98.954	Sus_scrofa
ENSVPAG00000008982	SMARCA5	96	96.230	ENSTGUG00000002408	SMARCA5	100	96.230	Taeniopygia_guttata
ENSVPAG00000008982	SMARCA5	98	98.740	ENSUAMG00000023495	SMARCA5	99	98.740	Ursus_americanus
ENSVPAG00000008982	SMARCA5	95	99.501	ENSUMAG00000015324	SMARCA5	97	99.501	Ursus_maritimus
ENSVPAG00000008982	SMARCA5	100	98.764	ENSVVUG00000017473	SMARCA5	100	98.764	Vulpes_vulpes
ENSVPAG00000008982	SMARCA5	92	90.872	ENSXETG00000017566	smarca5	95	93.136	Xenopus_tropicalis