EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000008993 (Gene tree)
Gene ID: -
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 106656 bases
Position: chrGeneScaffold_981:606646-713301
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000008367	PPR	PF01535.20	2.6e-30	1	6
ENSVPAP00000008367	PPR	PF01535.20	2.6e-30	2	6
ENSVPAP00000008367	PPR	PF01535.20	2.6e-30	3	6
ENSVPAP00000008367	PPR	PF01535.20	2.6e-30	4	6
ENSVPAP00000008367	PPR	PF01535.20	2.6e-30	5	6
ENSVPAP00000008367	PPR	PF01535.20	2.6e-30	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000008996	LRPPRC-201	4026	-	ENSVPAP00000008367	1341 (aa)	-	UPI00018BE808

Gene Model

Click here to download ENSVPAG00000008993's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000008993's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000008993	LRPPRC	99	49.446	ENSAPOG00000016610	lrpprc	94	49.446	Acanthochromis_polyacanthus
ENSVPAG00000008993	LRPPRC	99	80.166	ENSAMEG00000005852	LRPPRC	99	78.443	Ailuropoda_melanoleuca
ENSVPAG00000008993	LRPPRC	99	48.242	ENSACIG00000009604	lrpprc	94	48.242	Amphilophus_citrinellus
ENSVPAG00000008993	LRPPRC	99	49.153	ENSAOCG00000005886	lrpprc	94	49.153	Amphiprion_ocellaris
ENSVPAG00000008993	LRPPRC	90	62.531	ENSAPEG00000002937	lrpprc	88	64.116	Amphiprion_percula
ENSVPAG00000008993	LRPPRC	87	63.119	ENSATEG00000010555	lrpprc	90	63.119	Anabas_testudineus
ENSVPAG00000008993	LRPPRC	99	59.007	ENSACAG00000029278	LRPPRC	96	59.007	Anolis_carolinensis
ENSVPAG00000008993	LRPPRC	99	76.506	ENSANAG00000027440	LRPPRC	96	76.654	Aotus_nancymaae
ENSVPAG00000008993	LRPPRC	84	62.129	ENSACLG00000023712	lrpprc	85	62.129	Astatotilapia_calliptera
ENSVPAG00000008993	LRPPRC	99	75.985	ENSCJAG00000000794	LRPPRC	96	75.985	Callithrix_jacchus
ENSVPAG00000008993	LRPPRC	96	86.396	ENSCHIG00000020173	LRPPRC	98	82.725	Capra_hircus
ENSVPAG00000008993	LRPPRC	94	63.455	ENSCAPG00000013631	LRPPRC	98	63.455	Cavia_aperea
ENSVPAG00000008993	LRPPRC	90	74.357	ENSCPOG00000000204	LRPPRC	99	74.357	Cavia_porcellus
ENSVPAG00000008993	LRPPRC	99	76.230	ENSCCAG00000031900	LRPPRC	96	76.230	Cebus_capucinus
ENSVPAG00000008993	LRPPRC	99	76.729	ENSCATG00000014187	LRPPRC	92	76.952	Cercocebus_atys
ENSVPAG00000008993	LRPPRC	100	74.703	ENSCLAG00000005203	LRPPRC	96	74.703	Chinchilla_lanigera
ENSVPAG00000008993	LRPPRC	99	77.175	ENSCSAG00000013233	LRPPRC	96	77.323	Chlorocebus_sabaeus
ENSVPAG00000008993	LRPPRC	84	80.132	ENSCHOG00000003631	LRPPRC	81	80.132	Choloepus_hoffmanni
ENSVPAG00000008993	LRPPRC	99	75.167	ENSCANG00000034961	LRPPRC	99	86.425	Colobus_angolensis_palliatus
ENSVPAG00000008993	LRPPRC	99	73.343	ENSCGRG00001016261	Lrpprc	96	73.343	Cricetulus_griseus_chok1gshd
ENSVPAG00000008993	LRPPRC	99	73.343	ENSCGRG00000004072	Lrpprc	96	73.343	Cricetulus_griseus_crigri
ENSVPAG00000008993	LRPPRC	88	49.877	ENSCSEG00000003850	lrpprc	83	49.877	Cynoglossus_semilaevis
ENSVPAG00000008993	LRPPRC	99	49.407	ENSCVAG00000012967	lrpprc	94	49.407	Cyprinodon_variegatus
ENSVPAG00000008993	LRPPRC	99	47.531	ENSDARG00000043970	lrpprc	93	47.531	Danio_rerio
ENSVPAG00000008993	LRPPRC	99	77.066	ENSDNOG00000012594	-	96	77.141	Dasypus_novemcinctus
ENSVPAG00000008993	LRPPRC	81	58.958	ENSDNOG00000032336	-	95	58.958	Dasypus_novemcinctus
ENSVPAG00000008993	LRPPRC	99	77.530	ENSDORG00000012233	Lrpprc	96	77.530	Dipodomys_ordii
ENSVPAG00000008993	LRPPRC	100	77.249	ENSETEG00000006657	LRPPRC	96	77.249	Echinops_telfairi
ENSVPAG00000008993	LRPPRC	83	67.647	ENSEEUG00000012340	LRPPRC	87	67.647	Erinaceus_europaeus
ENSVPAG00000008993	LRPPRC	99	49.663	ENSELUG00000012803	lrpprc	98	49.663	Esox_lucius
ENSVPAG00000008993	LRPPRC	99	82.278	ENSFCAG00000013468	LRPPRC	96	82.278	Felis_catus
ENSVPAG00000008993	LRPPRC	99	54.104	ENSFALG00000012738	LRPPRC	99	54.104	Ficedula_albicollis
ENSVPAG00000008993	LRPPRC	99	72.721	ENSFDAG00000015328	LRPPRC	96	72.721	Fukomys_damarensis
ENSVPAG00000008993	LRPPRC	99	48.925	ENSFHEG00000019604	lrpprc	94	48.925	Fundulus_heteroclitus
ENSVPAG00000008993	LRPPRC	99	47.133	ENSGMOG00000008337	lrpprc	96	47.059	Gadus_morhua
ENSVPAG00000008993	LRPPRC	99	49.703	ENSGAFG00000001455	lrpprc	95	49.703	Gambusia_affinis
ENSVPAG00000008993	LRPPRC	99	48.110	ENSGACG00000010679	lrpprc	99	47.964	Gasterosteus_aculeatus
ENSVPAG00000008993	LRPPRC	99	49.557	ENSHBUG00000000393	lrpprc	92	49.557	Haplochromis_burtoni
ENSVPAG00000008993	LRPPRC	99	74.944	ENSHGLG00000006123	LRPPRC	96	74.944	Heterocephalus_glaber_female
ENSVPAG00000008993	LRPPRC	62	75.270	ENSHGLG00100005960	-	99	75.270	Heterocephalus_glaber_male
ENSVPAG00000008993	LRPPRC	97	48.558	ENSHCOG00000002107	lrpprc	95	48.558	Hippocampus_comes
ENSVPAG00000008993	LRPPRC	94	56.437	ENSIPUG00000009406	lrpprc	90	56.437	Ictalurus_punctatus
ENSVPAG00000008993	LRPPRC	99	79.480	ENSSTOG00000011185	LRPPRC	96	79.480	Ictidomys_tridecemlineatus
ENSVPAG00000008993	LRPPRC	99	76.212	ENSJJAG00000020475	Lrpprc	97	76.212	Jaculus_jaculus
ENSVPAG00000008993	LRPPRC	99	46.028	ENSKMAG00000003287	lrpprc	81	46.028	Kryptolebias_marmoratus
ENSVPAG00000008993	LRPPRC	83	62.240	ENSLBEG00000023225	lrpprc	85	62.402	Labrus_bergylta
ENSVPAG00000008993	LRPPRC	99	59.297	ENSLACG00000014030	LRPPRC	95	59.297	Latimeria_chalumnae
ENSVPAG00000008993	LRPPRC	99	56.444	ENSLOCG00000016390	lrpprc	92	56.444	Lepisosteus_oculatus
ENSVPAG00000008993	LRPPRC	99	72.383	ENSLAFG00000008614	LRPPRC	96	72.383	Loxodonta_africana
ENSVPAG00000008993	LRPPRC	99	76.580	ENSMFAG00000041560	LRPPRC	96	74.317	Macaca_fascicularis
ENSVPAG00000008993	LRPPRC	97	77.005	ENSMMUG00000019841	LRPPRC	99	77.235	Macaca_mulatta
ENSVPAG00000008993	LRPPRC	99	76.803	ENSMNEG00000031613	LRPPRC	96	77.026	Macaca_nemestrina
ENSVPAG00000008993	LRPPRC	83	61.125	ENSMAMG00000021835	lrpprc	80	61.125	Mastacembelus_armatus
ENSVPAG00000008993	LRPPRC	99	49.631	ENSMZEG00005027379	lrpprc	94	49.631	Maylandia_zebra
ENSVPAG00000008993	LRPPRC	99	73.939	ENSMAUG00000012118	Lrpprc	99	73.189	Mesocricetus_auratus
ENSVPAG00000008993	LRPPRC	99	79.390	ENSMICG00000010486	LRPPRC	96	79.390	Microcebus_murinus
ENSVPAG00000008993	LRPPRC	99	75.428	ENSMOCG00000006048	Lrpprc	96	75.428	Microtus_ochrogaster
ENSVPAG00000008993	LRPPRC	86	61.194	ENSMMOG00000007830	lrpprc	88	61.194	Mola_mola
ENSVPAG00000008993	LRPPRC	99	66.148	ENSMODG00000000648	LRPPRC	99	66.148	Monodelphis_domestica
ENSVPAG00000008993	LRPPRC	99	48.294	ENSMALG00000001271	lrpprc	94	48.554	Monopterus_albus
ENSVPAG00000008993	LRPPRC	99	78.826	ENSMPUG00000011800	LRPPRC	95	81.609	Mustela_putorius_furo
ENSVPAG00000008993	LRPPRC	99	81.027	ENSMLUG00000010575	LRPPRC	96	81.027	Myotis_lucifugus
ENSVPAG00000008993	LRPPRC	99	74.030	ENSNGAG00000013069	Lrpprc	96	74.104	Nannospalax_galili
ENSVPAG00000008993	LRPPRC	90	59.843	ENSNBRG00000013202	lrpprc	95	59.843	Neolamprologus_brichardi
ENSVPAG00000008993	LRPPRC	99	75.019	ENSNLEG00000016782	LRPPRC	96	75.019	Nomascus_leucogenys
ENSVPAG00000008993	LRPPRC	92	88.889	ENSOPRG00000016774	LRPPRC	89	88.889	Ochotona_princeps
ENSVPAG00000008993	LRPPRC	99	76.194	ENSODEG00000011211	LRPPRC	96	76.194	Octodon_degus
ENSVPAG00000008993	LRPPRC	99	49.777	ENSONIG00000000917	lrpprc	95	49.777	Oreochromis_niloticus
ENSVPAG00000008993	LRPPRC	53	61.250	ENSOANG00000014670	-	94	61.806	Ornithorhynchus_anatinus
ENSVPAG00000008993	LRPPRC	99	79.539	ENSOCUG00000015046	LRPPRC	92	79.613	Oryctolagus_cuniculus
ENSVPAG00000008993	LRPPRC	93	52.425	ENSORLG00000004605	lrpprc	92	51.810	Oryzias_latipes
ENSVPAG00000008993	LRPPRC	95	49.302	ENSORLG00020012536	lrpprc	99	48.331	Oryzias_latipes_hni
ENSVPAG00000008993	LRPPRC	93	53.051	ENSORLG00015018270	lrpprc	84	60.794	Oryzias_latipes_hsok
ENSVPAG00000008993	LRPPRC	99	75.839	ENSOGAG00000012798	LRPPRC	96	75.839	Otolemur_garnettii
ENSVPAG00000008993	LRPPRC	99	82.825	ENSOARG00000006522	LRPPRC	96	82.825	Ovis_aries
ENSVPAG00000008993	LRPPRC	99	73.848	ENSPPAG00000040876	LRPPRC	96	73.923	Pan_paniscus
ENSVPAG00000008993	LRPPRC	99	81.981	ENSPPRG00000006578	LRPPRC	96	81.981	Panthera_pardus
ENSVPAG00000008993	LRPPRC	99	82.130	ENSPTIG00000000933	LRPPRC	96	82.130	Panthera_tigris_altaica
ENSVPAG00000008993	LRPPRC	99	75.913	ENSPTRG00000011880	LRPPRC	96	75.913	Pan_troglodytes
ENSVPAG00000008993	LRPPRC	99	76.283	ENSPANG00000020731	LRPPRC	92	76.506	Papio_anubis
ENSVPAG00000008993	LRPPRC	85	57.143	ENSPKIG00000022232	lrpprc	88	57.143	Paramormyrops_kingsleyae
ENSVPAG00000008993	LRPPRC	63	61.844	ENSPSIG00000006830	-	98	61.844	Pelodiscus_sinensis
ENSVPAG00000008993	LRPPRC	60	46.667	ENSPMGG00000016597	lrpprc	89	46.667	Periophthalmus_magnuspinnatus
ENSVPAG00000008993	LRPPRC	98	42.662	ENSPMAG00000002147	lrpprc	99	42.662	Petromyzon_marinus
ENSVPAG00000008993	LRPPRC	99	49.294	ENSPFOG00000011227	lrpprc	97	49.257	Poecilia_formosa
ENSVPAG00000008993	LRPPRC	99	49.071	ENSPLAG00000004018	lrpprc	95	49.071	Poecilia_latipinna
ENSVPAG00000008993	LRPPRC	99	49.442	ENSPMEG00000016425	lrpprc	95	49.442	Poecilia_mexicana
ENSVPAG00000008993	LRPPRC	99	49.182	ENSPREG00000003662	lrpprc	95	49.182	Poecilia_reticulata
ENSVPAG00000008993	LRPPRC	60	75.031	ENSPPYG00000029532	-	99	75.031	Pongo_abelii
ENSVPAG00000008993	LRPPRC	83	74.669	ENSPCAG00000001430	LRPPRC	81	74.669	Procavia_capensis
ENSVPAG00000008993	LRPPRC	94	90.347	ENSPVAG00000002007	LRPPRC	91	90.347	Pteropus_vampyrus
ENSVPAG00000008993	LRPPRC	83	63.588	ENSPNYG00000000756	lrpprc	82	63.021	Pundamilia_nyererei
ENSVPAG00000008993	LRPPRC	99	51.064	ENSPNAG00000002895	lrpprc	96	51.064	Pygocentrus_nattereri
ENSVPAG00000008993	LRPPRC	99	74.013	ENSRNOG00000005877	Lrpprc	96	74.237	Rattus_norvegicus
ENSVPAG00000008993	LRPPRC	99	74.797	ENSRBIG00000031552	LRPPRC	96	74.945	Rhinopithecus_bieti
ENSVPAG00000008993	LRPPRC	99	75.782	ENSSBOG00000011807	LRPPRC	96	75.931	Saimiri_boliviensis_boliviensis
ENSVPAG00000008993	LRPPRC	99	63.474	ENSSHAG00000018725	LRPPRC	99	63.474	Sarcophilus_harrisii
ENSVPAG00000008993	LRPPRC	94	54.239	ENSSFOG00015001042	lrpprc	88	54.239	Scleropages_formosus
ENSVPAG00000008993	LRPPRC	99	49.556	ENSSDUG00000019062	lrpprc	94	49.556	Seriola_dumerili
ENSVPAG00000008993	LRPPRC	85	57.895	ENSSLDG00000023028	lrpprc	88	57.895	Seriola_lalandi_dorsalis
ENSVPAG00000008993	LRPPRC	80	82.647	ENSSARG00000000426	LRPPRC	92	82.647	Sorex_araneus
ENSVPAG00000008993	LRPPRC	99	45.885	ENSSPAG00000000162	lrpprc	94	45.918	Stegastes_partitus
ENSVPAG00000008993	LRPPRC	99	84.140	ENSSSCG00000008452	LRPPRC	96	84.140	Sus_scrofa
ENSVPAG00000008993	LRPPRC	97	53.735	ENSTGUG00000003759	LRPPRC	99	53.735	Taeniopygia_guttata
ENSVPAG00000008993	LRPPRC	90	49.715	ENSTRUG00000008409	lrpprc	91	49.715	Takifugu_rubripes
ENSVPAG00000008993	LRPPRC	99	48.301	ENSTNIG00000007470	lrpprc	99	48.301	Tetraodon_nigroviridis
ENSVPAG00000008993	LRPPRC	99	85.704	ENSTTRG00000006403	LRPPRC	96	85.704	Tursiops_truncatus
ENSVPAG00000008993	LRPPRC	99	57.746	ENSXETG00000009296	lrpprc	97	58.043	Xenopus_tropicalis
ENSVPAG00000008993	LRPPRC	87	58.128	ENSXCOG00000013343	lrpprc	83	58.128	Xiphophorus_couchianus
ENSVPAG00000008993	LRPPRC	99	49.555	ENSXMAG00000018108	lrpprc	95	49.555	Xiphophorus_maculatus