EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVPAG00000009224 (Gene tree)
Gene ID: -
Gene Symbol: PATL1
Alias: FLJ36874|Pat1b
Full Name: PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type: protein_coding
Species: Vicugna_pacos
Status: putative
Strand: Minus strand
Length: 58485 bases
Position: chrGeneScaffold_2552:91792-150276
Accession: 26721
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVPAP00000008588	PAT1	PF09770.9	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVPAT00000009224	PATL1-201	1965	-	ENSVPAP00000008588	654 (aa)	-	UPI00018BD0C3

Gene Model

Click here to download ENSVPAG00000009224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000009224's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVPAG00000009224	PATL1	76	97.222	ENSG00000166889	PATL1	65	97.222	Homo_sapiens
ENSVPAG00000009224	PATL1	50	33.735	ENSG00000229474	PATL2	90	34.132	Homo_sapiens
ENSVPAG00000009224	PATL1	57	68.293	ENSAPOG00000021290	patl1	50	68.293	Acanthochromis_polyacanthus
ENSVPAG00000009224	PATL1	76	97.321	ENSAMEG00000014215	PATL1	65	97.321	Ailuropoda_melanoleuca
ENSVPAG00000009224	PATL1	50	32.622	ENSAMEG00000014997	PATL2	61	32.530	Ailuropoda_melanoleuca
ENSVPAG00000009224	PATL1	51	32.840	ENSAPEG00000011299	patl2	52	32.938	Amphiprion_percula
ENSVPAG00000009224	PATL1	50	33.735	ENSATEG00000019567	patl2	50	34.234	Anabas_testudineus
ENSVPAG00000009224	PATL1	50	36.970	ENSAPLG00000003980	PATL2	53	36.937	Anas_platyrhynchos
ENSVPAG00000009224	PATL1	76	81.602	ENSACAG00000006607	PATL1	62	83.673	Anolis_carolinensis
ENSVPAG00000009224	PATL1	50	34.347	ENSANAG00000022701	PATL2	59	34.132	Aotus_nancymaae
ENSVPAG00000009224	PATL1	76	96.429	ENSANAG00000023078	PATL1	65	96.429	Aotus_nancymaae
ENSVPAG00000009224	PATL1	74	96.364	ENSBTAG00000005913	PATL1	63	96.364	Bos_taurus
ENSVPAG00000009224	PATL1	50	34.848	ENSBTAG00000001558	PATL2	90	34.731	Bos_taurus
ENSVPAG00000009224	PATL1	50	34.043	ENSCJAG00000002379	PATL2	59	33.832	Callithrix_jacchus
ENSVPAG00000009224	PATL1	76	97.321	ENSCJAG00000016192	PATL1	65	97.321	Callithrix_jacchus
ENSVPAG00000009224	PATL1	50	34.242	ENSCAFG00000013629	PATL2	60	34.132	Canis_familiaris
ENSVPAG00000009224	PATL1	76	97.321	ENSCAFG00000007581	PATL1	65	97.321	Canis_familiaris
ENSVPAG00000009224	PATL1	50	34.242	ENSCAFG00020022169	PATL2	59	34.132	Canis_lupus_dingo
ENSVPAG00000009224	PATL1	76	97.321	ENSCAFG00020001648	PATL1	68	97.321	Canis_lupus_dingo
ENSVPAG00000009224	PATL1	74	100.000	ENSCHIG00000025913	PATL1	64	100.000	Capra_hircus
ENSVPAG00000009224	PATL1	50	35.758	ENSCHIG00000026665	PATL2	60	35.629	Capra_hircus
ENSVPAG00000009224	PATL1	76	96.096	ENSTSYG00000012748	PATL1	64	96.096	Carlito_syrichta
ENSVPAG00000009224	PATL1	50	31.940	ENSTSYG00000032456	PATL2	59	31.953	Carlito_syrichta
ENSVPAG00000009224	PATL1	73	96.000	ENSCAPG00000013668	PATL1	61	95.918	Cavia_aperea
ENSVPAG00000009224	PATL1	73	96.000	ENSCPOG00000006827	PATL1	60	95.918	Cavia_porcellus
ENSVPAG00000009224	PATL1	50	34.242	ENSCCAG00000025261	PATL2	60	34.030	Cebus_capucinus
ENSVPAG00000009224	PATL1	76	97.222	ENSCCAG00000023759	PATL1	65	97.222	Cebus_capucinus
ENSVPAG00000009224	PATL1	76	97.222	ENSCATG00000009629	PATL1	65	97.222	Cercocebus_atys
ENSVPAG00000009224	PATL1	50	34.242	ENSCATG00000034794	PATL2	90	34.132	Cercocebus_atys
ENSVPAG00000009224	PATL1	76	93.056	ENSCLAG00000003427	PATL1	65	93.056	Chinchilla_lanigera
ENSVPAG00000009224	PATL1	50	34.043	ENSCSAG00000009601	PATL2	60	34.030	Chlorocebus_sabaeus
ENSVPAG00000009224	PATL1	76	97.222	ENSCSAG00000006095	PATL1	72	97.222	Chlorocebus_sabaeus
ENSVPAG00000009224	PATL1	57	96.726	ENSCHOG00000001611	PATL1	60	96.726	Choloepus_hoffmanni
ENSVPAG00000009224	PATL1	50	33.333	ENSCANG00000013856	PATL2	60	34.328	Colobus_angolensis_palliatus
ENSVPAG00000009224	PATL1	76	97.222	ENSCANG00000039197	PATL1	65	97.222	Colobus_angolensis_palliatus
ENSVPAG00000009224	PATL1	76	97.222	ENSCGRG00001024927	Patl1	65	97.222	Cricetulus_griseus_chok1gshd
ENSVPAG00000009224	PATL1	76	97.222	ENSCGRG00000000461	Patl1	65	97.222	Cricetulus_griseus_crigri
ENSVPAG00000009224	PATL1	57	70.732	ENSCSEG00000008261	patl1	51	70.732	Cynoglossus_semilaevis
ENSVPAG00000009224	PATL1	76	95.833	ENSDNOG00000038865	PATL1	71	96.364	Dasypus_novemcinctus
ENSVPAG00000009224	PATL1	50	33.333	ENSDNOG00000036837	PATL2	55	33.333	Dasypus_novemcinctus
ENSVPAG00000009224	PATL1	76	95.833	ENSDORG00000000237	Patl1	65	95.833	Dipodomys_ordii
ENSVPAG00000009224	PATL1	50	32.523	ENSETEG00000005068	PATL2	90	33.735	Echinops_telfairi
ENSVPAG00000009224	PATL1	76	97.297	ENSEASG00005007963	PATL1	68	97.297	Equus_asinus_asinus
ENSVPAG00000009224	PATL1	50	32.622	ENSECAG00000013462	PATL2	59	34.535	Equus_caballus
ENSVPAG00000009224	PATL1	76	97.297	ENSECAG00000011411	PATL1	65	97.297	Equus_caballus
ENSVPAG00000009224	PATL1	76	97.321	ENSFCAG00000015573	PATL1	65	97.321	Felis_catus
ENSVPAG00000009224	PATL1	50	32.727	ENSFCAG00000027170	PATL2	60	32.733	Felis_catus
ENSVPAG00000009224	PATL1	76	85.714	ENSFALG00000012150	PATL1	65	85.714	Ficedula_albicollis
ENSVPAG00000009224	PATL1	73	97.959	ENSFDAG00000016128	PATL1	63	97.959	Fukomys_damarensis
ENSVPAG00000009224	PATL1	50	33.934	ENSFHEG00000009727	patl2	62	33.934	Fundulus_heteroclitus
ENSVPAG00000009224	PATL1	51	30.383	ENSGMOG00000005666	patl2	80	30.473	Gadus_morhua
ENSVPAG00000009224	PATL1	72	82.424	ENSGALG00000042641	PATL1	61	82.424	Gallus_gallus
ENSVPAG00000009224	PATL1	76	86.905	ENSGAGG00000004461	PATL1	68	86.905	Gopherus_agassizii
ENSVPAG00000009224	PATL1	50	33.636	ENSGGOG00000025923	PATL2	59	34.030	Gorilla_gorilla
ENSVPAG00000009224	PATL1	76	97.222	ENSGGOG00000004335	PATL1	66	97.222	Gorilla_gorilla
ENSVPAG00000009224	PATL1	51	34.615	ENSHBUG00000005929	patl2	52	34.615	Haplochromis_burtoni
ENSVPAG00000009224	PATL1	73	96.000	ENSHGLG00000018173	PATL1	62	97.959	Heterocephalus_glaber_female
ENSVPAG00000009224	PATL1	73	96.000	ENSHGLG00100003453	PATL1	63	97.959	Heterocephalus_glaber_male
ENSVPAG00000009224	PATL1	50	35.347	ENSSTOG00000033848	PATL2	59	35.329	Ictidomys_tridecemlineatus
ENSVPAG00000009224	PATL1	76	97.321	ENSSTOG00000013764	PATL1	65	97.321	Ictidomys_tridecemlineatus
ENSVPAG00000009224	PATL1	76	97.222	ENSJJAG00000010135	Patl1	65	97.222	Jaculus_jaculus
ENSVPAG00000009224	PATL1	64	68.293	ENSLACG00000004640	PATL1	58	68.293	Latimeria_chalumnae
ENSVPAG00000009224	PATL1	76	97.619	ENSLAFG00000015161	PATL1	65	97.619	Loxodonta_africana
ENSVPAG00000009224	PATL1	76	97.222	ENSMFAG00000040851	PATL1	65	97.222	Macaca_fascicularis
ENSVPAG00000009224	PATL1	50	34.043	ENSMFAG00000003565	PATL2	60	34.030	Macaca_fascicularis
ENSVPAG00000009224	PATL1	76	97.222	ENSMMUG00000017287	PATL1	65	97.222	Macaca_mulatta
ENSVPAG00000009224	PATL1	50	33.939	ENSMMUG00000014294	PATL2	90	33.832	Macaca_mulatta
ENSVPAG00000009224	PATL1	76	97.222	ENSMNEG00000038692	PATL1	65	97.222	Macaca_nemestrina
ENSVPAG00000009224	PATL1	50	34.043	ENSMNEG00000034510	PATL2	60	34.030	Macaca_nemestrina
ENSVPAG00000009224	PATL1	50	34.043	ENSMLEG00000042248	PATL2	59	34.030	Mandrillus_leucophaeus
ENSVPAG00000009224	PATL1	76	97.222	ENSMLEG00000030044	PATL1	65	97.222	Mandrillus_leucophaeus
ENSVPAG00000009224	PATL1	50	33.939	ENSMAMG00000013327	patl2	50	33.939	Mastacembelus_armatus
ENSVPAG00000009224	PATL1	50	37.576	ENSMGAG00000001309	PATL2	53	37.538	Meleagris_gallopavo
ENSVPAG00000009224	PATL1	67	85.000	ENSMGAG00000003406	PATL1	59	85.000	Meleagris_gallopavo
ENSVPAG00000009224	PATL1	50	32.416	ENSMAUG00000001008	Patl2	62	32.326	Mesocricetus_auratus
ENSVPAG00000009224	PATL1	75	97.222	ENSMAUG00000012059	Patl1	72	97.222	Mesocricetus_auratus
ENSVPAG00000009224	PATL1	76	97.222	ENSMICG00000004172	PATL1	63	97.222	Microcebus_murinus
ENSVPAG00000009224	PATL1	50	33.131	ENSMICG00000005037	PATL2	90	34.337	Microcebus_murinus
ENSVPAG00000009224	PATL1	76	97.222	ENSMOCG00000010087	Patl1	65	97.222	Microtus_ochrogaster
ENSVPAG00000009224	PATL1	57	70.732	ENSMMOG00000013711	patl1	52	70.732	Mola_mola
ENSVPAG00000009224	PATL1	76	91.071	ENSMODG00000020201	PATL1	63	91.071	Monodelphis_domestica
ENSVPAG00000009224	PATL1	50	33.636	ENSMODG00000017690	PATL2	57	33.634	Monodelphis_domestica
ENSVPAG00000009224	PATL1	51	52.711	ENSMALG00000018706	patl1	53	65.854	Monopterus_albus
ENSVPAG00000009224	PATL1	76	97.222	MGP_CAROLIEiJ_G0022739	Patl1	65	97.222	Mus_caroli
ENSVPAG00000009224	PATL1	76	97.222	ENSMUSG00000046139	Patl1	65	97.222	Mus_musculus
ENSVPAG00000009224	PATL1	76	96.726	MGP_PahariEiJ_G0014233	Patl1	65	96.726	Mus_pahari
ENSVPAG00000009224	PATL1	76	97.222	MGP_SPRETEiJ_G0023652	Patl1	65	97.222	Mus_spretus
ENSVPAG00000009224	PATL1	76	97.619	ENSMPUG00000014607	PATL1	65	97.619	Mustela_putorius_furo
ENSVPAG00000009224	PATL1	72	97.674	ENSMLUG00000011169	PATL1	64	97.024	Myotis_lucifugus
ENSVPAG00000009224	PATL1	76	97.222	ENSNGAG00000003682	Patl1	65	97.222	Nannospalax_galili
ENSVPAG00000009224	PATL1	75	97.222	ENSNLEG00000013081	PATL1	66	97.222	Nomascus_leucogenys
ENSVPAG00000009224	PATL1	51	34.535	ENSNLEG00000005673	PATL2	60	34.627	Nomascus_leucogenys
ENSVPAG00000009224	PATL1	65	91.369	ENSMEUG00000009391	PATL1	65	91.369	Notamacropus_eugenii
ENSVPAG00000009224	PATL1	65	94.345	ENSOPRG00000007963	PATL1	65	94.345	Ochotona_princeps
ENSVPAG00000009224	PATL1	63	90.837	ENSODEG00000001792	PATL1	69	97.959	Octodon_degus
ENSVPAG00000009224	PATL1	51	87.798	ENSOANG00000011117	-	82	87.798	Ornithorhynchus_anatinus
ENSVPAG00000009224	PATL1	76	96.429	ENSOCUG00000002156	PATL1	65	96.429	Oryctolagus_cuniculus
ENSVPAG00000009224	PATL1	76	97.222	ENSOGAG00000004351	PATL1	65	97.222	Otolemur_garnettii
ENSVPAG00000009224	PATL1	74	100.000	ENSOARG00000012005	PATL1	60	100.000	Ovis_aries
ENSVPAG00000009224	PATL1	50	34.139	ENSPPAG00000007221	PATL2	59	34.328	Pan_paniscus
ENSVPAG00000009224	PATL1	76	97.222	ENSPPAG00000034275	PATL1	66	97.222	Pan_paniscus
ENSVPAG00000009224	PATL1	50	32.424	ENSPPRG00000004279	PATL2	60	32.335	Panthera_pardus
ENSVPAG00000009224	PATL1	76	97.024	ENSPPRG00000020639	PATL1	65	97.024	Panthera_pardus
ENSVPAG00000009224	PATL1	50	32.121	ENSPTIG00000018964	PATL2	60	32.036	Panthera_tigris_altaica
ENSVPAG00000009224	PATL1	76	97.024	ENSPTIG00000019298	PATL1	65	97.024	Panthera_tigris_altaica
ENSVPAG00000009224	PATL1	71	90.683	ENSPTRG00000003697	PATL1	64	90.683	Pan_troglodytes
ENSVPAG00000009224	PATL1	50	33.636	ENSPTRG00000041536	PATL2	59	34.030	Pan_troglodytes
ENSVPAG00000009224	PATL1	50	34.043	ENSPANG00000018026	PATL2	60	34.030	Papio_anubis
ENSVPAG00000009224	PATL1	76	97.222	ENSPANG00000035620	PATL1	65	97.222	Papio_anubis
ENSVPAG00000009224	PATL1	76	86.310	ENSPSIG00000016206	PATL1	59	86.310	Pelodiscus_sinensis
ENSVPAG00000009224	PATL1	50	35.241	ENSPMGG00000014550	patl2	52	35.241	Periophthalmus_magnuspinnatus
ENSVPAG00000009224	PATL1	76	96.131	ENSPEMG00000014215	Patl1	65	96.131	Peromyscus_maniculatus_bairdii
ENSVPAG00000009224	PATL1	76	91.071	ENSPCIG00000010852	PATL1	62	91.071	Phascolarctos_cinereus
ENSVPAG00000009224	PATL1	76	97.222	ENSPPYG00000003230	PATL1	65	97.222	Pongo_abelii
ENSVPAG00000009224	PATL1	51	34.132	ENSPCOG00000000295	PATL2	90	35.435	Propithecus_coquereli
ENSVPAG00000009224	PATL1	76	97.321	ENSPCOG00000020770	PATL1	67	97.321	Propithecus_coquereli
ENSVPAG00000009224	PATL1	76	97.260	ENSPVAG00000015239	PATL1	78	97.260	Pteropus_vampyrus
ENSVPAG00000009224	PATL1	51	34.320	ENSPNYG00000017381	patl2	52	34.320	Pundamilia_nyererei
ENSVPAG00000009224	PATL1	57	70.732	ENSPNYG00000018936	patl1	52	70.732	Pundamilia_nyererei
ENSVPAG00000009224	PATL1	76	98.611	ENSRNOG00000021052	Patl1	65	98.611	Rattus_norvegicus
ENSVPAG00000009224	PATL1	50	32.622	ENSRBIG00000040369	PATL2	59	33.731	Rhinopithecus_bieti
ENSVPAG00000009224	PATL1	76	97.222	ENSRBIG00000032263	PATL1	63	97.222	Rhinopithecus_bieti
ENSVPAG00000009224	PATL1	50	32.622	ENSRROG00000028786	PATL2	59	34.030	Rhinopithecus_roxellana
ENSVPAG00000009224	PATL1	76	97.222	ENSRROG00000032861	PATL1	65	97.222	Rhinopithecus_roxellana
ENSVPAG00000009224	PATL1	51	34.535	ENSSBOG00000034766	PATL2	59	34.431	Saimiri_boliviensis_boliviensis
ENSVPAG00000009224	PATL1	76	97.222	ENSSBOG00000025195	PATL1	66	97.222	Saimiri_boliviensis_boliviensis
ENSVPAG00000009224	PATL1	76	91.369	ENSSHAG00000004309	PATL1	62	91.369	Sarcophilus_harrisii
ENSVPAG00000009224	PATL1	51	33.923	ENSSMAG00000017262	patl2	53	34.441	Scophthalmus_maximus
ENSVPAG00000009224	PATL1	62	96.429	ENSSARG00000009600	PATL1	53	96.429	Sorex_araneus
ENSVPAG00000009224	PATL1	76	85.714	ENSSPUG00000009453	PATL1	63	85.714	Sphenodon_punctatus
ENSVPAG00000009224	PATL1	50	37.048	ENSSPUG00000019065	PATL2	91	37.048	Sphenodon_punctatus
ENSVPAG00000009224	PATL1	50	33.731	ENSSPAG00000004784	patl2	51	33.832	Stegastes_partitus
ENSVPAG00000009224	PATL1	76	98.630	ENSSSCG00000013124	PATL1	75	98.630	Sus_scrofa
ENSVPAG00000009224	PATL1	76	85.417	ENSTGUG00000006222	PATL1	65	85.417	Taeniopygia_guttata
ENSVPAG00000009224	PATL1	65	95.833	ENSTBEG00000000796	PATL1	56	95.833	Tupaia_belangeri
ENSVPAG00000009224	PATL1	65	97.619	ENSTTRG00000009389	PATL1	65	97.619	Tursiops_truncatus
ENSVPAG00000009224	PATL1	50	32.727	ENSUAMG00000018533	PATL2	59	32.635	Ursus_americanus
ENSVPAG00000009224	PATL1	76	97.321	ENSUMAG00000018634	PATL1	73	97.321	Ursus_maritimus
ENSVPAG00000009224	PATL1	50	32.727	ENSUMAG00000007738	PATL2	59	32.635	Ursus_maritimus
ENSVPAG00000009224	PATL1	76	97.321	ENSVVUG00000016668	PATL1	72	97.321	Vulpes_vulpes
ENSVPAG00000009224	PATL1	50	33.939	ENSVVUG00000011576	PATL2	60	33.832	Vulpes_vulpes
ENSVPAG00000009224	PATL1	50	34.835	ENSXETG00000014167	patl2	55	34.835	Xenopus_tropicalis
ENSVPAG00000009224	PATL1	50	51.351	ENSXCOG00000010808	patl1	58	51.351	Xiphophorus_couchianus