EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSVPAG00000009443 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Vicugna_pacos
Status
putative
Strand
Plus strand
Length
53789 bases
Position
chrGeneScaffold_3222:53485-107273
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVPAP00000008786tRNA_anti-codonPF01336.251.8e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVPAT00000009445RPA1-2011842-ENSVPAP00000008786613 (aa)-UPI00018BCCFB
Gene Model
Click here to download ENSVPAG00000009443's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVPAG00000009443's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVPAG00000009443RPA19960.791ENSAPOG00000011658rpa19960.862Acanthochromis_polyacanthus
ENSVPAG00000009443RPA19956.098ENSAPOG00000019409RPA19156.098Acanthochromis_polyacanthus
ENSVPAG00000009443RPA19989.379ENSAMEG00000007706RPA19989.379Ailuropoda_melanoleuca
ENSVPAG00000009443RPA19656.537ENSACIG00000007277rpa19956.537Amphilophus_citrinellus
ENSVPAG00000009443RPA19556.588ENSACIG00000012881RPA19956.588Amphilophus_citrinellus
ENSVPAG00000009443RPA19952.950ENSAOCG00000009003RPA19953.106Amphiprion_ocellaris
ENSVPAG00000009443RPA19961.111ENSAOCG00000023376rpa19962.069Amphiprion_ocellaris
ENSVPAG00000009443RPA19951.515ENSAPEG00000019132RPA19952.200Amphiprion_percula
ENSVPAG00000009443RPA19960.948ENSAPEG00000008634rpa19962.003Amphiprion_percula
ENSVPAG00000009443RPA19562.264ENSATEG00000022024rpa19962.264Anabas_testudineus
ENSVPAG00000009443RPA19953.715ENSATEG00000006443RPA19953.715Anabas_testudineus
ENSVPAG00000009443RPA19864.845ENSAPLG00000012442RPA110064.845Anas_platyrhynchos
ENSVPAG00000009443RPA19961.538ENSACAG00000014490RPA19862.520Anolis_carolinensis
ENSVPAG00000009443RPA19887.728ENSANAG00000023456RPA110087.728Aotus_nancymaae
ENSVPAG00000009443RPA19462.957ENSACLG00000006640rpa19962.957Astatotilapia_calliptera
ENSVPAG00000009443RPA19955.836ENSACLG00000005223RPA19955.836Astatotilapia_calliptera
ENSVPAG00000009443RPA19960.626ENSAMXG00000008418rpa19961.020Astyanax_mexicanus
ENSVPAG00000009443RPA110093.019ENSBTAG00000009711RPA110093.019Bos_taurus
ENSVPAG00000009443RPA110087.662ENSCJAG00000001848RPA110087.662Callithrix_jacchus
ENSVPAG00000009443RPA110089.448ENSCAFG00000019249RPA110089.448Canis_familiaris
ENSVPAG00000009443RPA110089.448ENSCAFG00020009847RPA110089.448Canis_lupus_dingo
ENSVPAG00000009443RPA110092.695ENSCHIG00000026308RPA110092.695Capra_hircus
ENSVPAG00000009443RPA110089.303ENSTSYG00000003482-10089.303Carlito_syrichta
ENSVPAG00000009443RPA110085.552ENSCPOG00000000035RPA110085.552Cavia_porcellus
ENSVPAG00000009443RPA110076.337ENSCCAG00000010981RPA110076.337Cebus_capucinus
ENSVPAG00000009443RPA19986.829ENSCLAG00000005185-10086.829Chinchilla_lanigera
ENSVPAG00000009443RPA110082.143ENSCLAG00000015045-10082.143Chinchilla_lanigera
ENSVPAG00000009443RPA110075.689ENSCSAG00000013833RPA110075.689Chlorocebus_sabaeus
ENSVPAG00000009443RPA19686.565ENSCHOG00000013540-10086.565Choloepus_hoffmanni
ENSVPAG00000009443RPA17190.433ENSCHOG00000009454-10090.433Choloepus_hoffmanni
ENSVPAG00000009443RPA19975.856ENSCPBG00000020377RPA19976.977Chrysemys_picta_bellii
ENSVPAG00000009443RPA19841.205ENSCING00000023482-9841.205Ciona_intestinalis
ENSVPAG00000009443RPA19884.628ENSCANG00000030911RPA110084.628Colobus_angolensis_palliatus
ENSVPAG00000009443RPA19987.217ENSCGRG00001008197Rpa19987.217Cricetulus_griseus_chok1gshd
ENSVPAG00000009443RPA18286.391ENSCGRG00000000582Rpa19986.391Cricetulus_griseus_crigri
ENSVPAG00000009443RPA19849.600ENSCSEG00000012726RPA19850.767Cynoglossus_semilaevis
ENSVPAG00000009443RPA19958.979ENSCSEG00000013066rpa19958.979Cynoglossus_semilaevis
ENSVPAG00000009443RPA19552.025ENSCVAG00000013446-9552.106Cyprinodon_variegatus
ENSVPAG00000009443RPA19961.075ENSCVAG00000019431rpa19962.522Cyprinodon_variegatus
ENSVPAG00000009443RPA19962.336ENSDARG00000003938rpa19962.336Danio_rerio
ENSVPAG00000009443RPA19989.274ENSDNOG00000017218RPA19889.274Dasypus_novemcinctus
ENSVPAG00000009443RPA110086.526ENSDORG00000006199Rpa110086.526Dipodomys_ordii
ENSVPAG00000009443RPA19841.503FBgn0010173RpA-709742.157Drosophila_melanogaster
ENSVPAG00000009443RPA18389.583ENSETEG00000017608RPA18289.583Echinops_telfairi
ENSVPAG00000009443RPA19891.030ENSEASG00005009372RPA110088.853Equus_asinus_asinus
ENSVPAG00000009443RPA110090.909ENSECAG00000023886RPA110090.909Equus_caballus
ENSVPAG00000009443RPA16890.238ENSEEUG00000002186-6890.238Erinaceus_europaeus
ENSVPAG00000009443RPA19960.000ENSELUG00000021071rpa19960.164Esox_lucius
ENSVPAG00000009443RPA18854.982ENSELUG00000006136RPA19954.982Esox_lucius
ENSVPAG00000009443RPA110087.844ENSFCAG00000006306RPA19987.844Felis_catus
ENSVPAG00000009443RPA110073.463ENSFALG00000006575RPA19973.463Ficedula_albicollis
ENSVPAG00000009443RPA19987.622ENSFDAG00000007720RPA19987.622Fukomys_damarensis
ENSVPAG00000009443RPA19959.574ENSFHEG00000003580rpa19959.574Fundulus_heteroclitus
ENSVPAG00000009443RPA19957.426ENSGMOG00000010382rpa19957.426Gadus_morhua
ENSVPAG00000009443RPA19973.892ENSGALG00000003072RPA19973.892Gallus_gallus
ENSVPAG00000009443RPA19959.836ENSGAFG00000012916rpa19959.836Gambusia_affinis
ENSVPAG00000009443RPA19953.077ENSGAFG00000020953RPA19953.385Gambusia_affinis
ENSVPAG00000009443RPA19959.375ENSGACG00000010856rpa19959.375Gasterosteus_aculeatus
ENSVPAG00000009443RPA19976.020ENSGAGG00000013611RPA19976.020Gopherus_agassizii
ENSVPAG00000009443RPA110085.065ENSGGOG00000014186RPA110085.065Gorilla_gorilla
ENSVPAG00000009443RPA19751.672ENSHBUG00000009348RPA19951.672Haplochromis_burtoni
ENSVPAG00000009443RPA19961.084ENSHBUG00000017773rpa19961.084Haplochromis_burtoni
ENSVPAG00000009443RPA19987.296ENSHGLG00000008846RPA110087.296Heterocephalus_glaber_female
ENSVPAG00000009443RPA19975.534ENSHGLG00100002005-9975.534Heterocephalus_glaber_male
ENSVPAG00000009443RPA19987.296ENSHGLG00100017755-10087.296Heterocephalus_glaber_male
ENSVPAG00000009443RPA110082.143ENSHGLG00100000799-10082.143Heterocephalus_glaber_male
ENSVPAG00000009443RPA19959.420ENSHCOG00000001401rpa19959.740Hippocampus_comes
ENSVPAG00000009443RPA19343.351ENSHCOG00000000351RPA19243.351Hippocampus_comes
ENSVPAG00000009443RPA19961.349ENSIPUG00000004400rpa19961.349Ictalurus_punctatus
ENSVPAG00000009443RPA19881.414ENSSTOG00000022475RPA19881.414Ictidomys_tridecemlineatus
ENSVPAG00000009443RPA19688.265ENSJJAG00000000876Rpa19888.265Jaculus_jaculus
ENSVPAG00000009443RPA19954.173ENSKMAG00000000234RPA19954.173Kryptolebias_marmoratus
ENSVPAG00000009443RPA19959.481ENSKMAG00000005605rpa19960.229Kryptolebias_marmoratus
ENSVPAG00000009443RPA19956.707ENSLBEG00000002281RPA19456.707Labrus_bergylta
ENSVPAG00000009443RPA19960.526ENSLBEG00000021604rpa19960.526Labrus_bergylta
ENSVPAG00000009443RPA18163.419ENSLACG00000007210RPA19963.419Latimeria_chalumnae
ENSVPAG00000009443RPA19966.063ENSLOCG00000006397rpa19966.063Lepisosteus_oculatus
ENSVPAG00000009443RPA19888.399ENSLAFG00000015354RPA19888.399Loxodonta_africana
ENSVPAG00000009443RPA18287.352ENSMFAG00000036138-10087.352Macaca_fascicularis
ENSVPAG00000009443RPA19987.624ENSMMUG00000011604-10087.769Macaca_mulatta
ENSVPAG00000009443RPA110080.713ENSMMUG00000002442-10080.713Macaca_mulatta
ENSVPAG00000009443RPA110084.878ENSMNEG00000031632-10084.878Macaca_nemestrina
ENSVPAG00000009443RPA18983.087ENSMNEG00000029837-10083.087Macaca_nemestrina
ENSVPAG00000009443RPA19881.384ENSMLEG00000038768-10081.384Mandrillus_leucophaeus
ENSVPAG00000009443RPA19961.020ENSMAMG00000017993rpa19961.034Mastacembelus_armatus
ENSVPAG00000009443RPA19950.450ENSMAMG00000020097RPA19950.450Mastacembelus_armatus
ENSVPAG00000009443RPA19955.836ENSMZEG00005024731RPA19955.836Maylandia_zebra
ENSVPAG00000009443RPA19961.412ENSMZEG00005007551rpa19961.412Maylandia_zebra
ENSVPAG00000009443RPA19973.214ENSMGAG00000005315RPA19973.214Meleagris_gallopavo
ENSVPAG00000009443RPA19887.833ENSMAUG00000010474Rpa19987.833Mesocricetus_auratus
ENSVPAG00000009443RPA110088.961ENSMICG00000012867RPA110088.961Microcebus_murinus
ENSVPAG00000009443RPA19986.786ENSMOCG00000013019Rpa19986.786Microtus_ochrogaster
ENSVPAG00000009443RPA19854.139ENSMMOG00000010868RPA19854.139Mola_mola
ENSVPAG00000009443RPA19661.735ENSMMOG00000014292rpa19961.383Mola_mola
ENSVPAG00000009443RPA19980.976ENSMODG00000010549RPA19980.976Monodelphis_domestica
ENSVPAG00000009443RPA19961.450ENSMALG00000011453rpa19961.614Monopterus_albus
ENSVPAG00000009443RPA19659.020ENSMALG00000001208RPA18259.020Monopterus_albus
ENSVPAG00000009443RPA19985.714MGP_CAROLIEiJ_G0016734Rpa19985.714Mus_caroli
ENSVPAG00000009443RPA19983.441ENSMUSG00000000751Rpa19983.441Mus_musculus
ENSVPAG00000009443RPA19986.430MGP_PahariEiJ_G0017871Rpa19986.430Mus_pahari
ENSVPAG00000009443RPA19983.467MGP_SPRETEiJ_G0017577Rpa19983.467Mus_spretus
ENSVPAG00000009443RPA110088.799ENSMPUG00000013119RPA110088.799Mustela_putorius_furo
ENSVPAG00000009443RPA110087.440ENSMLUG00000006113RPA110087.440Myotis_lucifugus
ENSVPAG00000009443RPA19984.615ENSNGAG00000004522Rpa19784.615Nannospalax_galili
ENSVPAG00000009443RPA19853.477ENSNBRG00000009672RPA19753.477Neolamprologus_brichardi
ENSVPAG00000009443RPA19462.759ENSNBRG00000020595rpa19962.759Neolamprologus_brichardi
ENSVPAG00000009443RPA110087.013ENSNLEG00000017149RPA110087.013Nomascus_leucogenys
ENSVPAG00000009443RPA19870.695ENSMEUG00000006714RPA19970.695Notamacropus_eugenii
ENSVPAG00000009443RPA19685.260ENSODEG00000009038RPA19685.260Octodon_degus
ENSVPAG00000009443RPA19962.069ENSONIG00000013135rpa19962.069Oreochromis_niloticus
ENSVPAG00000009443RPA19881.924ENSOANG00000010880RPA19982.090Ornithorhynchus_anatinus
ENSVPAG00000009443RPA110085.139ENSOCUG00000001504RPA110085.139Oryctolagus_cuniculus
ENSVPAG00000009443RPA19961.056ENSORLG00000004856rpa19961.056Oryzias_latipes
ENSVPAG00000009443RPA19952.696ENSORLG00000003368RPA19952.696Oryzias_latipes
ENSVPAG00000009443RPA19961.221ENSORLG00020008980rpa19961.221Oryzias_latipes_hni
ENSVPAG00000009443RPA19950.983ENSORLG00020015284RPA19950.983Oryzias_latipes_hni
ENSVPAG00000009443RPA17158.161ENSORLG00015005867-9858.161Oryzias_latipes_hsok
ENSVPAG00000009443RPA19952.648ENSORLG00015020383RPA19952.648Oryzias_latipes_hsok
ENSVPAG00000009443RPA19961.221ENSORLG00015013982rpa19961.221Oryzias_latipes_hsok
ENSVPAG00000009443RPA19959.211ENSOMEG00000004704rpa19959.211Oryzias_melastigma
ENSVPAG00000009443RPA19555.060ENSOMEG00000011040RPA110055.060Oryzias_melastigma
ENSVPAG00000009443RPA110087.500ENSOGAG00000005581-10087.500Otolemur_garnettii
ENSVPAG00000009443RPA19482.456ENSOGAG00000029379-10093.651Otolemur_garnettii
ENSVPAG00000009443RPA110092.695ENSOARG00000014479RPA110092.695Ovis_aries
ENSVPAG00000009443RPA110087.662ENSPPAG00000039680RPA110087.662Pan_paniscus
ENSVPAG00000009443RPA110087.520ENSPPRG00000011807RPA19987.520Panthera_pardus
ENSVPAG00000009443RPA110087.358ENSPTIG00000007898RPA19987.358Panthera_tigris_altaica
ENSVPAG00000009443RPA110087.662ENSPTRG00000008539RPA110087.662Pan_troglodytes
ENSVPAG00000009443RPA110087.500ENSPANG00000024592RPA110087.500Papio_anubis
ENSVPAG00000009443RPA19359.478ENSPKIG00000008053rpa19359.478Paramormyrops_kingsleyae
ENSVPAG00000009443RPA19875.333ENSPSIG00000015617RPA19975.333Pelodiscus_sinensis
ENSVPAG00000009443RPA19453.952ENSPMGG00000000543RPA19954.482Periophthalmus_magnuspinnatus
ENSVPAG00000009443RPA19860.465ENSPMGG00000011589rpa19960.631Periophthalmus_magnuspinnatus
ENSVPAG00000009443RPA19987.602ENSPEMG00000021061Rpa19987.602Peromyscus_maniculatus_bairdii
ENSVPAG00000009443RPA110079.579ENSPCIG00000019049RPA19980.065Phascolarctos_cinereus
ENSVPAG00000009443RPA19960.000ENSPFOG00000003987rpa19960.000Poecilia_formosa
ENSVPAG00000009443RPA19959.869ENSPLAG00000004984rpa19959.869Poecilia_latipinna
ENSVPAG00000009443RPA19352.202ENSPLAG00000008844-9652.202Poecilia_latipinna
ENSVPAG00000009443RPA19352.529ENSPMEG00000003627-9653.181Poecilia_mexicana
ENSVPAG00000009443RPA19960.163ENSPMEG00000020602rpa19961.217Poecilia_mexicana
ENSVPAG00000009443RPA19950.744ENSPREG00000010119RPA19950.893Poecilia_reticulata
ENSVPAG00000009443RPA19453.608ENSPREG00000010174rpa19653.608Poecilia_reticulata
ENSVPAG00000009443RPA110089.286ENSPCOG00000001799RPA110089.286Propithecus_coquereli
ENSVPAG00000009443RPA110090.260ENSPVAG00000002149RPA110090.260Pteropus_vampyrus
ENSVPAG00000009443RPA19961.412ENSPNYG00000016316rpa19962.912Pundamilia_nyererei
ENSVPAG00000009443RPA19955.521ENSPNYG00000024165RPA19955.521Pundamilia_nyererei
ENSVPAG00000009443RPA19953.707ENSPNAG00000008599rpa19655.479Pygocentrus_nattereri
ENSVPAG00000009443RPA19888.406ENSRNOG00000003123Rpa19986.786Rattus_norvegicus
ENSVPAG00000009443RPA110087.196ENSRBIG00000036587RPA110087.196Rhinopithecus_bieti
ENSVPAG00000009443RPA110082.010ENSRROG00000043278RPA110082.010Rhinopithecus_roxellana
ENSVPAG00000009443RPA19431.973YAR007CRFA19331.973Saccharomyces_cerevisiae
ENSVPAG00000009443RPA19883.775ENSSBOG00000030233RPA19983.775Saimiri_boliviensis_boliviensis
ENSVPAG00000009443RPA19980.782ENSSHAG00000007969RPA19980.945Sarcophilus_harrisii
ENSVPAG00000009443RPA19962.932ENSSFOG00015005362rpa19162.932Scleropages_formosus
ENSVPAG00000009443RPA19951.360ENSSMAG00000019746RPA19951.360Scophthalmus_maximus
ENSVPAG00000009443RPA19950.963ENSSDUG00000016358RPA19159.138Seriola_dumerili
ENSVPAG00000009443RPA19962.007ENSSDUG00000011949rpa19962.007Seriola_dumerili
ENSVPAG00000009443RPA19849.926ENSSLDG00000020784RPA19059.504Seriola_lalandi_dorsalis
ENSVPAG00000009443RPA19962.171ENSSLDG00000011806rpa19962.171Seriola_lalandi_dorsalis
ENSVPAG00000009443RPA19868.595ENSSARG00000007506RPA110068.595Sorex_araneus
ENSVPAG00000009443RPA19871.285ENSSPUG00000007223RPA19971.285Sphenodon_punctatus
ENSVPAG00000009443RPA19961.120ENSSPAG00000009903rpa19961.120Stegastes_partitus
ENSVPAG00000009443RPA19656.441ENSSPAG00000011165RPA19756.655Stegastes_partitus
ENSVPAG00000009443RPA19892.040ENSSSCG00000017822RPA110092.040Sus_scrofa
ENSVPAG00000009443RPA110073.214ENSTGUG00000005775RPA19973.214Taeniopygia_guttata
ENSVPAG00000009443RPA19861.424ENSTRUG00000003616rpa19861.424Takifugu_rubripes
ENSVPAG00000009443RPA19857.557ENSTRUG00000000405RPA18757.557Takifugu_rubripes
ENSVPAG00000009443RPA19962.459ENSTNIG00000016199rpa19962.459Tetraodon_nigroviridis
ENSVPAG00000009443RPA18793.023ENSTBEG00000002709RPA18993.023Tupaia_belangeri
ENSVPAG00000009443RPA19990.732ENSTTRG00000001169RPA19990.732Tursiops_truncatus
ENSVPAG00000009443RPA18996.154ENSUAMG00000015676RPA19796.154Ursus_americanus
ENSVPAG00000009443RPA110090.422ENSUMAG00000009328RPA110090.422Ursus_maritimus
ENSVPAG00000009443RPA110089.610ENSVVUG00000021715RPA110089.610Vulpes_vulpes
ENSVPAG00000009443RPA19972.085ENSXETG00000013538rpa19872.951Xenopus_tropicalis
ENSVPAG00000009443RPA19159.213ENSXCOG00000010068rpa19459.386Xiphophorus_couchianus
ENSVPAG00000009443RPA19554.530ENSXCOG00000009899-9954.530Xiphophorus_couchianus
ENSVPAG00000009443RPA19959.024ENSXMAG00000004102rpa19960.733Xiphophorus_maculatus
ENSVPAG00000009443RPA19857.778ENSXMAG00000010333RPA19257.778Xiphophorus_maculatus

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